RNA–Protein interactions for RNA: ENST00000416319.5

FAM3A-207, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-207ENST00000416319 JPH4Q96JJ6 628 aa32.66■■■□□ 2.82
FAM3A-207ENST00000416319 ARHGEF11O15085 1522 aa32.65■■■□□ 2.82
FAM3A-207ENST00000416319 SHROOM2Q13796 1616 aa32.64■■■□□ 2.82
FAM3A-207ENST00000416319 IQGAP2Q13576 1575 aa32.58■■■□□ 2.81
FAM3A-207ENST00000416319 RIMBP3CA6NJZ7 1639 aa32.55■■■□□ 2.8
FAM3A-207ENST00000416319 RIMBP3BA6NNM3 1639 aa32.55■■■□□ 2.8
FAM3A-207ENST00000416319 RIMBP3Q9UFD9 1639 aa32.55■■■□□ 2.8
FAM3A-207ENST00000416319 GOLGA3Q08378 1498 aa32.54■■■□□ 2.8
FAM3A-207ENST00000416319 PRG4Q92954 1404 aaPredicted RBP32.53■■■□□ 2.8
FAM3A-207ENST00000416319 CTTNBP2Q8WZ74 1663 aa32.46■■■□□ 2.79
FAM3A-207ENST00000416319 UGGT2Q9NYU1 1516 aa32.46■■■□□ 2.79
FAM3A-207ENST00000416319 ERCC6L2Q5T890 1561 aa32.43■■■□□ 2.78
FAM3A-207ENST00000416319 ARAP1Q96P48 1450 aa32.42■■■□□ 2.78
FAM3A-207ENST00000416319 CARMIL2Q6F5E8 1435 aa32.41■■■□□ 2.78
FAM3A-207ENST00000416319 UBTFP17480 764 aaKnown RBP32.39■■■□□ 2.78
FAM3A-207ENST00000416319 DISP1Q96F81 1524 aa32.36■■■□□ 2.77
FAM3A-207ENST00000416319 CYB5RLQ6IPT4 315 aa32.33■■■□□ 2.77
FAM3A-207ENST00000416319 EHMT2Q96KQ7 1210 aa32.3■■■□□ 2.76
FAM3A-207ENST00000416319 TNIKQ9UKE5 1360 aa32.28■■■□□ 2.76
FAM3A-207ENST00000416319 KIAA0556O60303 1618 aa32.25■■■□□ 2.75
FAM3A-207ENST00000416319 PTPRGP23470 1445 aa32.22■■■□□ 2.75
FAM3A-207ENST00000416319 SAMD9Q5K651 1589 aa32.18■■■□□ 2.74
FAM3A-207ENST00000416319 EFCAB5A4FU69 1503 aa32.16■■■□□ 2.74
FAM3A-207ENST00000416319 RANGAP1P46060 587 aaPredicted RBP32.09■■■□□ 2.73
FAM3A-207ENST00000416319 LOC105371045A0A1W2PR82 267 aa32.05■■■□□ 2.72
FAM3A-207ENST00000416319 P3H3Q8IVL6 736 aa32.05■■■□□ 2.72
FAM3A-207ENST00000416319 UACAQ9BZF9 1416 aa32.02■■■□□ 2.72
FAM3A-207ENST00000416319 ARHGAP35Q9NRY4 1499 aa32.02■■■□□ 2.72
FAM3A-207ENST00000416319 TTBK1Q5TCY1 1321 aaPredicted RBP32■■■□□ 2.71
FAM3A-207ENST00000416319 UHRF1BP1LA0JNW5 1464 aa32■■■□□ 2.71
FAM3A-207ENST00000416319 FHOD3Q2V2M9 1422 aa32■■■□□ 2.71
FAM3A-207ENST00000416319 CLIP1P30622 1438 aa31.96■■■□□ 2.71
FAM3A-207ENST00000416319 ADCY10Q96PN6 1610 aa31.93■■■□□ 2.7
FAM3A-207ENST00000416319 ABCC2Q92887 1545 aa31.93■■■□□ 2.7
FAM3A-207ENST00000416319 PLB1Q6P1J6 1458 aa31.91■■■□□ 2.7
FAM3A-207ENST00000416319 ABCA8O94911 1581 aa31.9■■■□□ 2.7
FAM3A-207ENST00000416319 CEP162Q5TB80 1403 aa31.89■■■□□ 2.7
FAM3A-207ENST00000416319 FMN1Q68DA7 1419 aa31.87■■■□□ 2.69
FAM3A-207ENST00000416319 NPM1P06748 294 aaKnown RBP eCLIP31.87■■■□□ 2.69
FAM3A-207ENST00000416319 KDM5BQ9UGL1 1544 aa31.82■■■□□ 2.68
FAM3A-207ENST00000416319 RAPGEF6Q8TEU7 1601 aa31.75■■■□□ 2.67
FAM3A-207ENST00000416319 MAPKBP1O60336 1514 aa31.75■■■□□ 2.67
FAM3A-207ENST00000416319 NUP153P49790 1475 aaKnown RBP31.71■■■□□ 2.67
FAM3A-207ENST00000416319 ATP10BO94823 1461 aa31.66■■■□□ 2.66
FAM3A-207ENST00000416319 CASKIN1Q8WXD9 1431 aa31.66■■■□□ 2.66
FAM3A-207ENST00000416319 ZCCHC11Q5TAX3 1644 aaKnown RBP31.64■■■□□ 2.66
FAM3A-207ENST00000416319 ASXL2Q76L83 1435 aa31.62■■■□□ 2.65
FAM3A-207ENST00000416319 HECW1Q76N89 1606 aa31.6■■■□□ 2.65
FAM3A-207ENST00000416319 FYCO1Q9BQS8 1478 aa31.59■■■□□ 2.65
FAM3A-207ENST00000416319 ABCC10Q5T3U5 1492 aa31.55■■■□□ 2.64
FAM3A-207ENST00000416319 ARID3CA6NKF2 412 aa31.55■■■□□ 2.64
FAM3A-207ENST00000416319 PCF11O94913 1555 aaKnown RBP31.54■■■□□ 2.64
FAM3A-207ENST00000416319 EPRSP07814 1512 aaKnown RBP31.54■■■□□ 2.64
FAM3A-207ENST00000416319 WDR7Q9Y4E6 1490 aa31.53■■■□□ 2.64
FAM3A-207ENST00000416319 ATP1B4Q9UN42 357 aaPredicted RBP31.52■■■□□ 2.64
FAM3A-207ENST00000416319 VPS8Q8N3P4 1428 aa31.51■■■□□ 2.64
FAM3A-207ENST00000416319 TRHP20396 242 aaPredicted RBP31.51■■■□□ 2.63
FAM3A-207ENST00000416319 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.5■■■□□ 2.63
FAM3A-207ENST00000416319 HNRNPUL2Q1KMD3 747 aaKnown RBP31.5■■■□□ 2.63
FAM3A-207ENST00000416319 CCDC18Q5T9S5 1454 aa31.48■■■□□ 2.63
FAM3A-207ENST00000416319 CDK13Q14004 1512 aaKnown RBP31.45■■■□□ 2.63
FAM3A-207ENST00000416319 PLEKHD1A6NEE1 506 aa31.45■■■□□ 2.63
FAM3A-207ENST00000416319 DIP2BQ9P265 1576 aa31.44■■■□□ 2.62
FAM3A-207ENST00000416319 FAM69CQ0P6D2 419 aa31.44■■■□□ 2.62
FAM3A-207ENST00000416319 CDK11AQ9UQ88 783 aaPredicted RBP31.44■■■□□ 2.62
FAM3A-207ENST00000416319 GLI2P10070 1586 aa31.41■■■□□ 2.62
FAM3A-207ENST00000416319 KCNH8Q96L42 1107 aa31.35■■■□□ 2.61
FAM3A-207ENST00000416319 LRRIQ1Q96JM4 1722 aa31.32■■■□□ 2.61
FAM3A-207ENST00000416319 KIF13AQ9H1H9 1805 aa31.32■■■□□ 2.6
FAM3A-207ENST00000416319 TROQ12816 1431 aaPredicted RBP31.31■■■□□ 2.6
FAM3A-207ENST00000416319 MAP3K1Q13233 1512 aa31.24■■■□□ 2.59
FAM3A-207ENST00000416319 ABCA9Q8IUA7 1624 aa31.2■■■□□ 2.59
FAM3A-207ENST00000416319 MAP3K4Q9Y6R4 1608 aa31.2■■■□□ 2.59
FAM3A-207ENST00000416319 CD109Q6YHK3 1445 aa31.2■■■□□ 2.59
FAM3A-207ENST00000416319 MAGI3Q5TCQ9 1506 aa31.19■■■□□ 2.58
FAM3A-207ENST00000416319 TIAM1Q13009 1591 aa31.17■■■□□ 2.58
FAM3A-207ENST00000416319 CFAP43Q8NDM7 1665 aa31.17■■■□□ 2.58
FAM3A-207ENST00000416319 MTUS2Q5JR59 1369 aa31.17■■■□□ 2.58
FAM3A-207ENST00000416319 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.15■■■□□ 2.58
FAM3A-207ENST00000416319 KIF14Q15058 1648 aa31.14■■■□□ 2.58
FAM3A-207ENST00000416319 APLP2Q06481 763 aa31.13■■■□□ 2.57
FAM3A-207ENST00000416319 TEX14Q8IWB6 1497 aa31.12■■■□□ 2.57
FAM3A-207ENST00000416319 EHBP1L1Q8N3D4 1523 aa31.11■■■□□ 2.57
FAM3A-207ENST00000416319 LRRC9Q6ZRR7 1453 aa31.08■■■□□ 2.57
FAM3A-207ENST00000416319 TTC37Q6PGP7 1564 aa31.07■■■□□ 2.56
FAM3A-207ENST00000416319 PPRC1Q5VV67 1664 aaKnown RBP31.06■■■□□ 2.56
FAM3A-207ENST00000416319 PLCH2O75038 1416 aa31.04■■■□□ 2.56
FAM3A-207ENST00000416319 PHLDB1Q86UU1 1377 aa31.02■■■□□ 2.56
FAM3A-207ENST00000416319 KANK4Q5T7N3 995 aaPredicted RBP31.01■■■□□ 2.55
FAM3A-207ENST00000416319 ARAP3Q8WWN8 1544 aa31.01■■■□□ 2.55
FAM3A-207ENST00000416319 TSPOAP1O95153 1857 aa30.99■■■□□ 2.55
FAM3A-207ENST00000416319 NEO1Q92859 1461 aa30.98■■■□□ 2.55
FAM3A-207ENST00000416319 EFCAB2Q5VUJ9 269 aa30.93■■■□□ 2.54
FAM3A-207ENST00000416319 FANCAO15360 1455 aa30.93■■■□□ 2.54
FAM3A-207ENST00000416319 NCOA2Q15596 1464 aa30.93■■■□□ 2.54
FAM3A-207ENST00000416319 GPATCH8Q9UKJ3 1502 aaKnown RBP30.93■■■□□ 2.54
FAM3A-207ENST00000416319 CCNB3Q8WWL7 1395 aa30.92■■■□□ 2.54
FAM3A-207ENST00000416319 SUPT6HQ7KZ85 1726 aaKnown RBP30.9■■■□□ 2.54
FAM3A-207ENST00000416319 MYO5CQ9NQX4 1742 aa30.9■■■□□ 2.54
FAM3A-207ENST00000416319 CFAP74Q9C0B2 1584 aa30.88■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms