RNA–Protein interactions for RNA: ENST00000415944.3

MECP2-204, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-204ENST00000415944 FAM9AQ8IZU1 332 aaPredicted RBP13.55□□□□□ -0.24
MECP2-204ENST00000415944 CTTNBP2Q8WZ74 1663 aa13.55□□□□□ -0.24
MECP2-204ENST00000415944 SHROOM2Q13796 1616 aa13.54□□□□□ -0.24
MECP2-204ENST00000415944 HRCP23327 699 aa13.54□□□□□ -0.24
MECP2-204ENST00000415944 KIAA0586Q9BVV6 1533 aa13.54□□□□□ -0.24
MECP2-204ENST00000415944 GOLGA3Q08378 1498 aa13.53□□□□□ -0.24
MECP2-204ENST00000415944 ZEB1P37275 1124 aaPredicted RBP13.52□□□□□ -0.25
MECP2-204ENST00000415944 PCGF6Q9BYE7 350 aa13.51□□□□□ -0.25
MECP2-204ENST00000415944 IQGAP2Q13576 1575 aa13.5□□□□□ -0.25
MECP2-204ENST00000415944 DNAJC5Q9H3Z4 198 aa13.5□□□□□ -0.25
MECP2-204ENST00000415944 ARHGEF11O15085 1522 aa13.46□□□□□ -0.25
MECP2-204ENST00000415944 RIMBP3CA6NJZ7 1639 aa13.46□□□□□ -0.26
MECP2-204ENST00000415944 RIMBP3BA6NNM3 1639 aa13.46□□□□□ -0.26
MECP2-204ENST00000415944 RIMBP3Q9UFD9 1639 aa13.46□□□□□ -0.26
MECP2-204ENST00000415944 UGGT2Q9NYU1 1516 aa13.44□□□□□ -0.26
MECP2-204ENST00000415944 ERCC6L2Q5T890 1561 aa13.42□□□□□ -0.26
MECP2-204ENST00000415944 JPH4Q96JJ6 628 aa13.42□□□□□ -0.26
MECP2-204ENST00000415944 CEP162Q5TB80 1403 aa13.41□□□□□ -0.26
MECP2-204ENST00000415944 PRG4Q92954 1404 aaPredicted RBP13.4□□□□□ -0.26
MECP2-204ENST00000415944 KIAA0556O60303 1618 aa13.39□□□□□ -0.27
MECP2-204ENST00000415944 DISP1Q96F81 1524 aa13.39□□□□□ -0.27
MECP2-204ENST00000415944 SAMD9Q5K651 1589 aa13.37□□□□□ -0.27
MECP2-204ENST00000415944 ARAP1Q96P48 1450 aa13.37□□□□□ -0.27
MECP2-204ENST00000415944 UBTFP17480 764 aaKnown RBP13.36□□□□□ -0.27
MECP2-204ENST00000415944 CARMIL2Q6F5E8 1435 aa13.35□□□□□ -0.27
MECP2-204ENST00000415944 EFCAB5A4FU69 1503 aa13.34□□□□□ -0.27
MECP2-204ENST00000415944 EHMT2Q96KQ7 1210 aa13.32□□□□□ -0.28
MECP2-204ENST00000415944 ARHGAP35Q9NRY4 1499 aa13.28□□□□□ -0.28
MECP2-204ENST00000415944 CLIP1P30622 1438 aa13.27□□□□□ -0.29
MECP2-204ENST00000415944 PTPRGP23470 1445 aa13.26□□□□□ -0.29
MECP2-204ENST00000415944 FHOD3Q2V2M9 1422 aa13.24□□□□□ -0.29
MECP2-204ENST00000415944 VPS8Q8N3P4 1428 aa13.24□□□□□ -0.29
MECP2-204ENST00000415944 APLP2Q06481 763 aa13.23□□□□□ -0.29
MECP2-204ENST00000415944 CYB5RLQ6IPT4 315 aa13.23□□□□□ -0.29
MECP2-204ENST00000415944 ADCY10Q96PN6 1610 aa13.23□□□□□ -0.29
MECP2-204ENST00000415944 ABCA8O94911 1581 aa13.23□□□□□ -0.29
MECP2-204ENST00000415944 UHRF1BP1LA0JNW5 1464 aa13.22□□□□□ -0.29
MECP2-204ENST00000415944 RANGAP1P46060 587 aaPredicted RBP13.21□□□□□ -0.29
MECP2-204ENST00000415944 ABCC2Q92887 1545 aa13.21□□□□□ -0.29
MECP2-204ENST00000415944 UACAQ9BZF9 1416 aa13.2□□□□□ -0.3
MECP2-204ENST00000415944 P3H3Q8IVL6 736 aa13.19□□□□□ -0.3
MECP2-204ENST00000415944 RAPGEF6Q8TEU7 1601 aa13.19□□□□□ -0.3
MECP2-204ENST00000415944 PLB1Q6P1J6 1458 aa13.18□□□□□ -0.3
MECP2-204ENST00000415944 FMN1Q68DA7 1419 aa13.17□□□□□ -0.3
MECP2-204ENST00000415944 TTBK1Q5TCY1 1321 aaPredicted RBP13.14□□□□□ -0.31
MECP2-204ENST00000415944 KDM5BQ9UGL1 1544 aa13.14□□□□□ -0.31
MECP2-204ENST00000415944 PCF11O94913 1555 aaKnown RBP13.13□□□□□ -0.31
MECP2-204ENST00000415944 ZCCHC11Q5TAX3 1644 aaKnown RBP13.13□□□□□ -0.31
MECP2-204ENST00000415944 HECW1Q76N89 1606 aa13.13□□□□□ -0.31
MECP2-204ENST00000415944 NUP153P49790 1475 aaKnown RBP13.12□□□□□ -0.31
MECP2-204ENST00000415944 MAPKBP1O60336 1514 aa13.12□□□□□ -0.31
MECP2-204ENST00000415944 LRRIQ1Q96JM4 1722 aa13.1□□□□□ -0.31
MECP2-204ENST00000415944 MAP3K1Q13233 1512 aa13.1□□□□□ -0.31
MECP2-204ENST00000415944 CASKIN1Q8WXD9 1431 aa13.1□□□□□ -0.31
MECP2-204ENST00000415944 FYCO1Q9BQS8 1478 aa13.1□□□□□ -0.31
MECP2-204ENST00000415944 ATP10BO94823 1461 aa13.08□□□□□ -0.32
MECP2-204ENST00000415944 EPRSP07814 1512 aaKnown RBP13.06□□□□□ -0.32
MECP2-204ENST00000415944 NPM1P06748 294 aaKnown RBP eCLIP13.05□□□□□ -0.32
MECP2-204ENST00000415944 CCDC18Q5T9S5 1454 aa13.04□□□□□ -0.32
MECP2-204ENST00000415944 CDK13Q14004 1512 aaKnown RBP13.04□□□□□ -0.32
MECP2-204ENST00000415944 ASXL2Q76L83 1435 aa13.03□□□□□ -0.32
MECP2-204ENST00000415944 CLSPNQ9HAW4 1339 aa13.02□□□□□ -0.33
MECP2-204ENST00000415944 WDR7Q9Y4E6 1490 aa13.02□□□□□ -0.33
MECP2-204ENST00000415944 CFAP43Q8NDM7 1665 aa13.02□□□□□ -0.33
MECP2-204ENST00000415944 KIF13AQ9H1H9 1805 aa13.02□□□□□ -0.33
MECP2-204ENST00000415944 DIP2BQ9P265 1576 aa13.01□□□□□ -0.33
MECP2-204ENST00000415944 ABCC10Q5T3U5 1492 aa12.99□□□□□ -0.33
MECP2-204ENST00000415944 GLI2P10070 1586 aa12.98□□□□□ -0.33
MECP2-204ENST00000415944 ARID3CA6NKF2 412 aa12.98□□□□□ -0.33
MECP2-204ENST00000415944 CCER1Q8TC90 406 aaPredicted RBP12.97□□□□□ -0.33
MECP2-204ENST00000415944 TIAM1Q13009 1591 aa12.97□□□□□ -0.33
MECP2-204ENST00000415944 MAGI3Q5TCQ9 1506 aa12.96□□□□□ -0.33
MECP2-204ENST00000415944 ATP1B4Q9UN42 357 aaPredicted RBP12.95□□□□□ -0.34
MECP2-204ENST00000415944 TROQ12816 1431 aaPredicted RBP12.95□□□□□ -0.34
MECP2-204ENST00000415944 ABCA9Q8IUA7 1624 aa12.94□□□□□ -0.34
MECP2-204ENST00000415944 MAP3K4Q9Y6R4 1608 aa12.94□□□□□ -0.34
MECP2-204ENST00000415944 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.93□□□□□ -0.34
MECP2-204ENST00000415944 HNRNPUL2Q1KMD3 747 aaKnown RBP12.93□□□□□ -0.34
MECP2-204ENST00000415944 EHBP1L1Q8N3D4 1523 aa12.93□□□□□ -0.34
MECP2-204ENST00000415944 KIF14Q15058 1648 aa12.92□□□□□ -0.34
MECP2-204ENST00000415944 PLEKHD1A6NEE1 506 aa12.92□□□□□ -0.34
MECP2-204ENST00000415944 RRBP1Q9P2E9 1410 aaKnown RBP12.92□□□□□ -0.34
MECP2-204ENST00000415944 CDK11AQ9UQ88 783 aaPredicted RBP12.92□□□□□ -0.34
MECP2-204ENST00000415944 PPRC1Q5VV67 1664 aaKnown RBP12.9□□□□□ -0.34
MECP2-204ENST00000415944 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.9□□□□□ -0.34
MECP2-204ENST00000415944 TTC37Q6PGP7 1564 aa12.9□□□□□ -0.35
MECP2-204ENST00000415944 FAM69CQ0P6D2 419 aa12.89□□□□□ -0.35
MECP2-204ENST00000415944 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.88□□□□□ -0.35
MECP2-204ENST00000415944 LRRC9Q6ZRR7 1453 aa12.88□□□□□ -0.35
MECP2-204ENST00000415944 TSPOAP1O95153 1857 aa12.88□□□□□ -0.35
MECP2-204ENST00000415944 MTUS2Q5JR59 1369 aa12.87□□□□□ -0.35
MECP2-204ENST00000415944 PPARGC1BQ86YN6 1023 aaKnown RBP12.87□□□□□ -0.35
MECP2-204ENST00000415944 SUPT6HQ7KZ85 1726 aaKnown RBP12.87□□□□□ -0.35
MECP2-204ENST00000415944 MYO5CQ9NQX4 1742 aa12.87□□□□□ -0.35
MECP2-204ENST00000415944 TRHP20396 242 aaPredicted RBP12.86□□□□□ -0.35
MECP2-204ENST00000415944 KCNH8Q96L42 1107 aa12.86□□□□□ -0.35
MECP2-204ENST00000415944 ACIN1Q9UKV3 1341 aaKnown RBP12.86□□□□□ -0.35
MECP2-204ENST00000415944 ARAP3Q8WWN8 1544 aa12.85□□□□□ -0.35
MECP2-204ENST00000415944 CDC42BPAQ5VT25 1732 aa12.85□□□□□ -0.35
MECP2-204ENST00000415944 CD109Q6YHK3 1445 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms