RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 FBLN2P98095 1184 aa22.54■■□□□ 1.2
HMGA1P1-201ENST00000415560 GRIN2AQ12879 1464 aa22.53■■□□□ 1.2
HMGA1P1-201ENST00000415560 KIAA0586Q9BVV6 1533 aa22.42■■□□□ 1.18
HMGA1P1-201ENST00000415560 IQGAP2Q13576 1575 aa22.42■■□□□ 1.18
HMGA1P1-201ENST00000415560 EFCAB5A4FU69 1503 aa22.41■■□□□ 1.18
HMGA1P1-201ENST00000415560 ARHGAP35Q9NRY4 1499 aa22.4■■□□□ 1.18
HMGA1P1-201ENST00000415560 CHD1O14646 1710 aa22.39■■□□□ 1.17
HMGA1P1-201ENST00000415560 NUP160Q12769 1436 aa22.37■■□□□ 1.17
HMGA1P1-201ENST00000415560 VPS8Q8N3P4 1428 aa22.36■■□□□ 1.17
HMGA1P1-201ENST00000415560 CEP170Q5SW79 1584 aa22.35■■□□□ 1.17
HMGA1P1-201ENST00000415560 ARAP1Q96P48 1450 aa22.33■■□□□ 1.16
HMGA1P1-201ENST00000415560 APLP2Q06481 763 aa22.31■■□□□ 1.16
HMGA1P1-201ENST00000415560 P3H3Q8IVL6 736 aa22.31■■□□□ 1.16
HMGA1P1-201ENST00000415560 UGGT2Q9NYU1 1516 aa22.3■■□□□ 1.16
HMGA1P1-201ENST00000415560 SAMD9Q5K651 1589 aa22.29■■□□□ 1.16
HMGA1P1-201ENST00000415560 JPH4Q96JJ6 628 aa22.26■■□□□ 1.15
HMGA1P1-201ENST00000415560 FMN1Q68DA7 1419 aa22.23■■□□□ 1.15
HMGA1P1-201ENST00000415560 FHOD3Q2V2M9 1422 aa22.23■■□□□ 1.15
HMGA1P1-201ENST00000415560 CARMIL2Q6F5E8 1435 aa22.23■■□□□ 1.15
HMGA1P1-201ENST00000415560 KIAA0556O60303 1618 aa22.17■■□□□ 1.14
HMGA1P1-201ENST00000415560 DISP1Q96F81 1524 aa22.15■■□□□ 1.14
HMGA1P1-201ENST00000415560 OSCARQ8IYS5 282 aa22.13■■□□□ 1.13
HMGA1P1-201ENST00000415560 ATP1B4Q9UN42 357 aaPredicted RBP22.12■■□□□ 1.13
HMGA1P1-201ENST00000415560 CASKIN1Q8WXD9 1431 aa22.11■■□□□ 1.13
HMGA1P1-201ENST00000415560 PRG4Q92954 1404 aaPredicted RBP22.1■■□□□ 1.13
HMGA1P1-201ENST00000415560 CLASP1Q7Z460 1538 aa22.1■■□□□ 1.13
HMGA1P1-201ENST00000415560 SHROOM2Q13796 1616 aa22.09■■□□□ 1.13
HMGA1P1-201ENST00000415560 FYCO1Q9BQS8 1478 aa22.09■■□□□ 1.13
HMGA1P1-201ENST00000415560 MAP3K1Q13233 1512 aa22.06■■□□□ 1.12
HMGA1P1-201ENST00000415560 PPARGC1BQ86YN6 1023 aaKnown RBP22.06■■□□□ 1.12
HMGA1P1-201ENST00000415560 PCF11O94913 1555 aaKnown RBP22.06■■□□□ 1.12
HMGA1P1-201ENST00000415560 TRIM26Q12899 539 aaPredicted RBP22.03■■□□□ 1.12
HMGA1P1-201ENST00000415560 TTBK1Q5TCY1 1321 aaPredicted RBP22.03■■□□□ 1.12
HMGA1P1-201ENST00000415560 HECW1Q76N89 1606 aa22■■□□□ 1.11
HMGA1P1-201ENST00000415560 TIAM1Q13009 1591 aa21.98■■□□□ 1.11
HMGA1P1-201ENST00000415560 PTPRGP23470 1445 aa21.97■■□□□ 1.11
HMGA1P1-201ENST00000415560 RAPGEF6Q8TEU7 1601 aa21.96■■□□□ 1.11
HMGA1P1-201ENST00000415560 CCDC18Q5T9S5 1454 aa21.96■■□□□ 1.11
HMGA1P1-201ENST00000415560 CFAP43Q8NDM7 1665 aa21.95■■□□□ 1.1
HMGA1P1-201ENST00000415560 KANK4Q5T7N3 995 aaPredicted RBP21.92■■□□□ 1.1
HMGA1P1-201ENST00000415560 LRRC9Q6ZRR7 1453 aa21.89■■□□□ 1.09
HMGA1P1-201ENST00000415560 PCGF6Q9BYE7 350 aa21.88■■□□□ 1.09
HMGA1P1-201ENST00000415560 CDK11AQ9UQ88 783 aaPredicted RBP21.88■■□□□ 1.09
HMGA1P1-201ENST00000415560 EPRSP07814 1512 aaKnown RBP21.88■■□□□ 1.09
HMGA1P1-201ENST00000415560 LRRIQ1Q96JM4 1722 aa21.87■■□□□ 1.09
HMGA1P1-201ENST00000415560 PLB1Q6P1J6 1458 aa21.86■■□□□ 1.09
HMGA1P1-201ENST00000415560 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.86■■□□□ 1.09
HMGA1P1-201ENST00000415560 HNRNPUL2Q1KMD3 747 aaKnown RBP21.86■■□□□ 1.09
HMGA1P1-201ENST00000415560 ABCA8O94911 1581 aa21.86■■□□□ 1.09
HMGA1P1-201ENST00000415560 ERCC6L2Q5T890 1561 aa21.86■■□□□ 1.09
HMGA1P1-201ENST00000415560 MTUS2Q5JR59 1369 aa21.85■■□□□ 1.09
HMGA1P1-201ENST00000415560 UACAQ9BZF9 1416 aa21.83■■□□□ 1.09
HMGA1P1-201ENST00000415560 NUP153P49790 1475 aaKnown RBP21.83■■□□□ 1.08
HMGA1P1-201ENST00000415560 ARID3CA6NKF2 412 aa21.78■■□□□ 1.08
HMGA1P1-201ENST00000415560 EHBP1L1Q8N3D4 1523 aa21.78■■□□□ 1.08
HMGA1P1-201ENST00000415560 CDK13Q14004 1512 aaKnown RBP21.77■■□□□ 1.08
HMGA1P1-201ENST00000415560 PLEKHD1A6NEE1 506 aa21.75■■□□□ 1.07
HMGA1P1-201ENST00000415560 SUPT6HQ7KZ85 1726 aaKnown RBP21.75■■□□□ 1.07
HMGA1P1-201ENST00000415560 ABCC2Q92887 1545 aa21.74■■□□□ 1.07
HMGA1P1-201ENST00000415560 UHRF1BP1LA0JNW5 1464 aa21.73■■□□□ 1.07
HMGA1P1-201ENST00000415560 ATP10BO94823 1461 aa21.72■■□□□ 1.07
HMGA1P1-201ENST00000415560 MAGI3Q5TCQ9 1506 aa21.66■■□□□ 1.06
HMGA1P1-201ENST00000415560 TROQ12816 1431 aaPredicted RBP21.66■■□□□ 1.06
HMGA1P1-201ENST00000415560 NCOA2Q15596 1464 aa21.65■■□□□ 1.06
HMGA1P1-201ENST00000415560 ARHGEF11O15085 1522 aa21.64■■□□□ 1.05
HMGA1P1-201ENST00000415560 RRBP1Q9P2E9 1410 aaKnown RBP21.63■■□□□ 1.05
HMGA1P1-201ENST00000415560 NPM1P06748 294 aaKnown RBP eCLIP21.63■■□□□ 1.05
HMGA1P1-201ENST00000415560 PHLDB1Q86UU1 1377 aa21.62■■□□□ 1.05
HMGA1P1-201ENST00000415560 CCNB3Q8WWL7 1395 aa21.61■■□□□ 1.05
HMGA1P1-201ENST00000415560 KDM5BQ9UGL1 1544 aa21.61■■□□□ 1.05
HMGA1P1-201ENST00000415560 DNAJC5Q9H3Z4 198 aa21.6■■□□□ 1.05
HMGA1P1-201ENST00000415560 ZCCHC11Q5TAX3 1644 aaKnown RBP21.58■■□□□ 1.05
HMGA1P1-201ENST00000415560 ADCY10Q96PN6 1610 aa21.58■■□□□ 1.05
HMGA1P1-201ENST00000415560 MYOM3Q5VTT5 1437 aa21.58■■□□□ 1.05
HMGA1P1-201ENST00000415560 RIMBP3CA6NJZ7 1639 aa21.56■■□□□ 1.04
HMGA1P1-201ENST00000415560 RIMBP3BA6NNM3 1639 aa21.56■■□□□ 1.04
HMGA1P1-201ENST00000415560 RIMBP3Q9UFD9 1639 aa21.56■■□□□ 1.04
HMGA1P1-201ENST00000415560 KIF14Q15058 1648 aa21.55■■□□□ 1.04
HMGA1P1-201ENST00000415560 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.54■■□□□ 1.04
HMGA1P1-201ENST00000415560 FAM50AQ14320 339 aaKnown RBP21.54■■□□□ 1.04
HMGA1P1-201ENST00000415560 FGD6Q6ZV73 1430 aa21.54■■□□□ 1.04
HMGA1P1-201ENST00000415560 MIA2Q96PC5 1412 aa21.53■■□□□ 1.04
HMGA1P1-201ENST00000415560 ITSN2Q9NZM3 1697 aa21.5■■□□□ 1.03
HMGA1P1-201ENST00000415560 CYB5RLQ6IPT4 315 aa21.5■■□□□ 1.03
HMGA1P1-201ENST00000415560 KCNH8Q96L42 1107 aa21.47■■□□□ 1.03
HMGA1P1-201ENST00000415560 CFDP1Q9UEE9 299 aaPredicted RBP21.46■■□□□ 1.03
HMGA1P1-201ENST00000415560 PTPN23Q9H3S7 1636 aa21.46■■□□□ 1.03
HMGA1P1-201ENST00000415560 ABCC10Q5T3U5 1492 aa21.44■■□□□ 1.02
HMGA1P1-201ENST00000415560 ITGAEP38570 1179 aa21.43■■□□□ 1.02
HMGA1P1-201ENST00000415560 TCOF1Q13428 1488 aaKnown RBP21.43■■□□□ 1.02
HMGA1P1-201ENST00000415560 GPATCH8Q9UKJ3 1502 aaKnown RBP21.43■■□□□ 1.02
HMGA1P1-201ENST00000415560 WDR7Q9Y4E6 1490 aa21.42■■□□□ 1.02
HMGA1P1-201ENST00000415560 CDC42BPAQ5VT25 1732 aa21.41■■□□□ 1.02
HMGA1P1-201ENST00000415560 ASXL2Q76L83 1435 aa21.4■■□□□ 1.02
HMGA1P1-201ENST00000415560 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.38■■□□□ 1.01
HMGA1P1-201ENST00000415560 MYO5CQ9NQX4 1742 aa21.36■■□□□ 1.01
HMGA1P1-201ENST00000415560 ZNF777Q9ULD5 760 aaPredicted RBP21.36■■□□□ 1.01
HMGA1P1-201ENST00000415560 PREX2Q70Z35 1606 aa21.33■■□□□ 1.01
HMGA1P1-201ENST00000415560 TTC37Q6PGP7 1564 aa21.32■■□□□ 1
HMGA1P1-201ENST00000415560 CDC42BPBQ9Y5S2 1711 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms