RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 IQGAP2Q13576 1575 aa19.75■□□□□ 0.75
ATG4B-207ENST00000415107 ARHGEF11O15085 1522 aa19.75■□□□□ 0.75
ATG4B-207ENST00000415107 CTTNBP2Q8WZ74 1663 aa19.75■□□□□ 0.75
ATG4B-207ENST00000415107 GOLGA3Q08378 1498 aa19.7■□□□□ 0.74
ATG4B-207ENST00000415107 RIMBP3CA6NJZ7 1639 aa19.69■□□□□ 0.74
ATG4B-207ENST00000415107 RIMBP3BA6NNM3 1639 aa19.69■□□□□ 0.74
ATG4B-207ENST00000415107 RIMBP3Q9UFD9 1639 aa19.69■□□□□ 0.74
ATG4B-207ENST00000415107 FAM9AQ8IZU1 332 aaPredicted RBP19.69■□□□□ 0.74
ATG4B-207ENST00000415107 UGGT2Q9NYU1 1516 aa19.69■□□□□ 0.74
ATG4B-207ENST00000415107 JPH4Q96JJ6 628 aa19.66■□□□□ 0.74
ATG4B-207ENST00000415107 PRG4Q92954 1404 aaPredicted RBP19.63■□□□□ 0.73
ATG4B-207ENST00000415107 ERCC6L2Q5T890 1561 aa19.61■□□□□ 0.73
ATG4B-207ENST00000415107 ARAP1Q96P48 1450 aa19.6■□□□□ 0.73
ATG4B-207ENST00000415107 DISP1Q96F81 1524 aa19.59■□□□□ 0.73
ATG4B-207ENST00000415107 CARMIL2Q6F5E8 1435 aa19.58■□□□□ 0.72
ATG4B-207ENST00000415107 KIAA0556O60303 1618 aa19.57■□□□□ 0.72
ATG4B-207ENST00000415107 SAMD9Q5K651 1589 aa19.55■□□□□ 0.72
ATG4B-207ENST00000415107 EFCAB5A4FU69 1503 aa19.52■□□□□ 0.72
ATG4B-207ENST00000415107 TNIKQ9UKE5 1360 aa19.5■□□□□ 0.71
ATG4B-207ENST00000415107 UBTFP17480 764 aaKnown RBP19.46■□□□□ 0.71
ATG4B-207ENST00000415107 PTPRGP23470 1445 aa19.42■□□□□ 0.7
ATG4B-207ENST00000415107 CYB5RLQ6IPT4 315 aa19.4■□□□□ 0.7
ATG4B-207ENST00000415107 UHRF1BP1LA0JNW5 1464 aa19.39■□□□□ 0.69
ATG4B-207ENST00000415107 ARHGAP35Q9NRY4 1499 aa19.39■□□□□ 0.69
ATG4B-207ENST00000415107 ABCC2Q92887 1545 aa19.35■□□□□ 0.69
ATG4B-207ENST00000415107 ABCA8O94911 1581 aa19.35■□□□□ 0.69
ATG4B-207ENST00000415107 UACAQ9BZF9 1416 aa19.34■□□□□ 0.69
ATG4B-207ENST00000415107 ADCY10Q96PN6 1610 aa19.34■□□□□ 0.69
ATG4B-207ENST00000415107 CLIP1P30622 1438 aa19.32■□□□□ 0.68
ATG4B-207ENST00000415107 FHOD3Q2V2M9 1422 aa19.32■□□□□ 0.68
ATG4B-207ENST00000415107 EHMT2Q96KQ7 1210 aa19.3■□□□□ 0.68
ATG4B-207ENST00000415107 CEP162Q5TB80 1403 aa19.29■□□□□ 0.68
ATG4B-207ENST00000415107 FMN1Q68DA7 1419 aa19.29■□□□□ 0.68
ATG4B-207ENST00000415107 KDM5BQ9UGL1 1544 aa19.28■□□□□ 0.68
ATG4B-207ENST00000415107 PLB1Q6P1J6 1458 aa19.28■□□□□ 0.68
ATG4B-207ENST00000415107 RAPGEF6Q8TEU7 1601 aa19.26■□□□□ 0.67
ATG4B-207ENST00000415107 MAPKBP1O60336 1514 aa19.25■□□□□ 0.67
ATG4B-207ENST00000415107 LOC105371045A0A1W2PR82 267 aa19.25■□□□□ 0.67
ATG4B-207ENST00000415107 P3H3Q8IVL6 736 aa19.23■□□□□ 0.67
ATG4B-207ENST00000415107 RANGAP1P46060 587 aaPredicted RBP19.2■□□□□ 0.66
ATG4B-207ENST00000415107 NUP153P49790 1475 aaKnown RBP19.19■□□□□ 0.66
ATG4B-207ENST00000415107 ZCCHC11Q5TAX3 1644 aaKnown RBP19.18■□□□□ 0.66
ATG4B-207ENST00000415107 HECW1Q76N89 1606 aa19.18■□□□□ 0.66
ATG4B-207ENST00000415107 CASKIN1Q8WXD9 1431 aa19.16■□□□□ 0.66
ATG4B-207ENST00000415107 NPM1P06748 294 aaKnown RBP eCLIP19.15■□□□□ 0.66
ATG4B-207ENST00000415107 TTBK1Q5TCY1 1321 aaPredicted RBP19.15■□□□□ 0.66
ATG4B-207ENST00000415107 FYCO1Q9BQS8 1478 aa19.15■□□□□ 0.66
ATG4B-207ENST00000415107 ATP10BO94823 1461 aa19.13■□□□□ 0.65
ATG4B-207ENST00000415107 PCF11O94913 1555 aaKnown RBP19.13■□□□□ 0.65
ATG4B-207ENST00000415107 EPRSP07814 1512 aaKnown RBP19.1■□□□□ 0.65
ATG4B-207ENST00000415107 ASXL2Q76L83 1435 aa19.09■□□□□ 0.65
ATG4B-207ENST00000415107 ABCC10Q5T3U5 1492 aa19.09■□□□□ 0.65
ATG4B-207ENST00000415107 CCDC18Q5T9S5 1454 aa19.09■□□□□ 0.65
ATG4B-207ENST00000415107 VPS8Q8N3P4 1428 aa19.08■□□□□ 0.65
ATG4B-207ENST00000415107 WDR7Q9Y4E6 1490 aa19.08■□□□□ 0.64
ATG4B-207ENST00000415107 DIP2BQ9P265 1576 aa19.06■□□□□ 0.64
ATG4B-207ENST00000415107 GLI2P10070 1586 aa19.06■□□□□ 0.64
ATG4B-207ENST00000415107 LRRIQ1Q96JM4 1722 aa19.05■□□□□ 0.64
ATG4B-207ENST00000415107 CDK13Q14004 1512 aaKnown RBP19.02■□□□□ 0.64
ATG4B-207ENST00000415107 KIF13AQ9H1H9 1805 aa19.02■□□□□ 0.63
ATG4B-207ENST00000415107 MAP3K1Q13233 1512 aa18.98■□□□□ 0.63
ATG4B-207ENST00000415107 CFAP43Q8NDM7 1665 aa18.95■□□□□ 0.62
ATG4B-207ENST00000415107 TROQ12816 1431 aaPredicted RBP18.94■□□□□ 0.62
ATG4B-207ENST00000415107 ABCA9Q8IUA7 1624 aa18.94■□□□□ 0.62
ATG4B-207ENST00000415107 MAP3K4Q9Y6R4 1608 aa18.94■□□□□ 0.62
ATG4B-207ENST00000415107 CDK11AQ9UQ88 783 aaPredicted RBP18.94■□□□□ 0.62
ATG4B-207ENST00000415107 PLEKHD1A6NEE1 506 aa18.93■□□□□ 0.62
ATG4B-207ENST00000415107 TIAM1Q13009 1591 aa18.91■□□□□ 0.62
ATG4B-207ENST00000415107 ARID3CA6NKF2 412 aa18.9■□□□□ 0.62
ATG4B-207ENST00000415107 MAGI3Q5TCQ9 1506 aa18.9■□□□□ 0.62
ATG4B-207ENST00000415107 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.89■□□□□ 0.61
ATG4B-207ENST00000415107 FAM69CQ0P6D2 419 aa18.89■□□□□ 0.61
ATG4B-207ENST00000415107 HNRNPUL2Q1KMD3 747 aaKnown RBP18.89■□□□□ 0.61
ATG4B-207ENST00000415107 EHBP1L1Q8N3D4 1523 aa18.89■□□□□ 0.61
ATG4B-207ENST00000415107 KIF14Q15058 1648 aa18.89■□□□□ 0.61
ATG4B-207ENST00000415107 ATP1B4Q9UN42 357 aaPredicted RBP18.88■□□□□ 0.61
ATG4B-207ENST00000415107 TRHP20396 242 aaPredicted RBP18.87■□□□□ 0.61
ATG4B-207ENST00000415107 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.86■□□□□ 0.61
ATG4B-207ENST00000415107 PPRC1Q5VV67 1664 aaKnown RBP18.85■□□□□ 0.61
ATG4B-207ENST00000415107 ARAP3Q8WWN8 1544 aa18.84■□□□□ 0.61
ATG4B-207ENST00000415107 TTC37Q6PGP7 1564 aa18.83■□□□□ 0.6
ATG4B-207ENST00000415107 TEX14Q8IWB6 1497 aa18.83■□□□□ 0.6
ATG4B-207ENST00000415107 CD109Q6YHK3 1445 aa18.83■□□□□ 0.6
ATG4B-207ENST00000415107 LRRC9Q6ZRR7 1453 aa18.81■□□□□ 0.6
ATG4B-207ENST00000415107 MTUS2Q5JR59 1369 aa18.81■□□□□ 0.6
ATG4B-207ENST00000415107 KCNH8Q96L42 1107 aa18.8■□□□□ 0.6
ATG4B-207ENST00000415107 PHLDB1Q86UU1 1377 aa18.77■□□□□ 0.6
ATG4B-207ENST00000415107 MYO5CQ9NQX4 1742 aa18.77■□□□□ 0.59
ATG4B-207ENST00000415107 NEO1Q92859 1461 aa18.77■□□□□ 0.59
ATG4B-207ENST00000415107 PLCH2O75038 1416 aa18.76■□□□□ 0.59
ATG4B-207ENST00000415107 SUPT6HQ7KZ85 1726 aaKnown RBP18.76■□□□□ 0.59
ATG4B-207ENST00000415107 CFAP74Q9C0B2 1584 aa18.76■□□□□ 0.59
ATG4B-207ENST00000415107 PREX2Q70Z35 1606 aa18.74■□□□□ 0.59
ATG4B-207ENST00000415107 TSPOAP1O95153 1857 aa18.74■□□□□ 0.59
ATG4B-207ENST00000415107 APLP2Q06481 763 aa18.72■□□□□ 0.59
ATG4B-207ENST00000415107 CDC42BPAQ5VT25 1732 aa18.71■□□□□ 0.59
ATG4B-207ENST00000415107 NCOA2Q15596 1464 aa18.71■□□□□ 0.59
ATG4B-207ENST00000415107 GPATCH8Q9UKJ3 1502 aaKnown RBP18.7■□□□□ 0.58
ATG4B-207ENST00000415107 ITSN2Q9NZM3 1697 aa18.7■□□□□ 0.58
ATG4B-207ENST00000415107 FANCAO15360 1455 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms