RNA–Protein interactions for RNA: ENST00000414670.2

ITGB1-203, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-203ENST00000414670 CLIP1P30622 1438 aa9.84□□□□□ -0.83
ITGB1-203ENST00000414670 SNAPC4Q5SXM2 1469 aa9.84□□□□□ -0.83
ITGB1-203ENST00000414670 MAGI1Q96QZ7 1491 aaPredicted RBP9.83□□□□□ -0.84
ITGB1-203ENST00000414670 RANGAP1P46060 587 aaPredicted RBP9.82□□□□□ -0.84
ITGB1-203ENST00000414670 ADAMTS12P58397 1594 aa9.82□□□□□ -0.84
ITGB1-203ENST00000414670 PBRM1Q86U86 1689 aa9.81□□□□□ -0.84
ITGB1-203ENST00000414670 CHMP7Q8WUX9 453 aaPredicted RBP9.81□□□□□ -0.84
ITGB1-203ENST00000414670 SYNJ2O15056 1496 aa9.79□□□□□ -0.84
ITGB1-203ENST00000414670 FBLN2P98095 1184 aa9.78□□□□□ -0.84
ITGB1-203ENST00000414670 GRIN2AQ12879 1464 aa9.78□□□□□ -0.84
ITGB1-203ENST00000414670 ARHGAP35Q9NRY4 1499 aa9.75□□□□□ -0.85
ITGB1-203ENST00000414670 VPS8Q8N3P4 1428 aa9.73□□□□□ -0.85
ITGB1-203ENST00000414670 KIAA0586Q9BVV6 1533 aa9.73□□□□□ -0.85
ITGB1-203ENST00000414670 ARAP1Q96P48 1450 aa9.72□□□□□ -0.85
ITGB1-203ENST00000414670 NUP160Q12769 1436 aa9.72□□□□□ -0.85
ITGB1-203ENST00000414670 P3H3Q8IVL6 736 aa9.71□□□□□ -0.86
ITGB1-203ENST00000414670 EFCAB5A4FU69 1503 aa9.71□□□□□ -0.86
ITGB1-203ENST00000414670 IQGAP2Q13576 1575 aa9.7□□□□□ -0.86
ITGB1-203ENST00000414670 CTTNBP2Q8WZ74 1663 aa9.69□□□□□ -0.86
ITGB1-203ENST00000414670 CEP170Q5SW79 1584 aa9.68□□□□□ -0.86
ITGB1-203ENST00000414670 FHOD3Q2V2M9 1422 aa9.68□□□□□ -0.86
ITGB1-203ENST00000414670 APLP2Q06481 763 aa9.68□□□□□ -0.86
ITGB1-203ENST00000414670 UGGT2Q9NYU1 1516 aa9.67□□□□□ -0.86
ITGB1-203ENST00000414670 JPH4Q96JJ6 628 aa9.67□□□□□ -0.86
ITGB1-203ENST00000414670 PIAS4Q8N2W9 510 aaPredicted RBP9.66□□□□□ -0.86
ITGB1-203ENST00000414670 PPARGC1BQ86YN6 1023 aaKnown RBP9.65□□□□□ -0.86
ITGB1-203ENST00000414670 SAMD9Q5K651 1589 aa9.65□□□□□ -0.86
ITGB1-203ENST00000414670 FMN1Q68DA7 1419 aa9.65□□□□□ -0.87
ITGB1-203ENST00000414670 CARMIL2Q6F5E8 1435 aa9.63□□□□□ -0.87
ITGB1-203ENST00000414670 DISP1Q96F81 1524 aa9.62□□□□□ -0.87
ITGB1-203ENST00000414670 CASKIN1Q8WXD9 1431 aa9.62□□□□□ -0.87
ITGB1-203ENST00000414670 TRIM26Q12899 539 aaPredicted RBP9.61□□□□□ -0.87
ITGB1-203ENST00000414670 ILDR1Q86SU0 546 aaPredicted RBP9.61□□□□□ -0.87
ITGB1-203ENST00000414670 ATP1B4Q9UN42 357 aaPredicted RBP9.61□□□□□ -0.87
ITGB1-203ENST00000414670 KIAA0556O60303 1618 aa9.6□□□□□ -0.87
ITGB1-203ENST00000414670 CHD1O14646 1710 aa9.59□□□□□ -0.87
ITGB1-203ENST00000414670 PRG4Q92954 1404 aaPredicted RBP9.59□□□□□ -0.87
ITGB1-203ENST00000414670 FYCO1Q9BQS8 1478 aa9.59□□□□□ -0.87
ITGB1-203ENST00000414670 TTBK1Q5TCY1 1321 aaPredicted RBP9.58□□□□□ -0.88
ITGB1-203ENST00000414670 OSCARQ8IYS5 282 aa9.58□□□□□ -0.88
ITGB1-203ENST00000414670 CLASP1Q7Z460 1538 aa9.57□□□□□ -0.88
ITGB1-203ENST00000414670 MYT1Q01538 1121 aa9.57□□□□□ -0.88
ITGB1-203ENST00000414670 KANK4Q5T7N3 995 aaPredicted RBP9.57□□□□□ -0.88
ITGB1-203ENST00000414670 PCGF6Q9BYE7 350 aa9.57□□□□□ -0.88
ITGB1-203ENST00000414670 PCF11O94913 1555 aaKnown RBP9.57□□□□□ -0.88
ITGB1-203ENST00000414670 MAP3K1Q13233 1512 aa9.56□□□□□ -0.88
ITGB1-203ENST00000414670 PTPRGP23470 1445 aa9.54□□□□□ -0.88
ITGB1-203ENST00000414670 SHROOM2Q13796 1616 aa9.53□□□□□ -0.88
ITGB1-203ENST00000414670 ZEB1P37275 1124 aaPredicted RBP9.53□□□□□ -0.88
ITGB1-203ENST00000414670 TIAM1Q13009 1591 aa9.53□□□□□ -0.88
ITGB1-203ENST00000414670 LRRC9Q6ZRR7 1453 aa9.52□□□□□ -0.89
ITGB1-203ENST00000414670 CCDC18Q5T9S5 1454 aa9.51□□□□□ -0.89
ITGB1-203ENST00000414670 PLB1Q6P1J6 1458 aa9.51□□□□□ -0.89
ITGB1-203ENST00000414670 EPRSP07814 1512 aaKnown RBP9.51□□□□□ -0.89
ITGB1-203ENST00000414670 HECW1Q76N89 1606 aa9.5□□□□□ -0.89
ITGB1-203ENST00000414670 ARID3CA6NKF2 412 aa9.5□□□□□ -0.89
ITGB1-203ENST00000414670 NUP153P49790 1475 aaKnown RBP9.5□□□□□ -0.89
ITGB1-203ENST00000414670 MTUS2Q5JR59 1369 aa9.5□□□□□ -0.89
ITGB1-203ENST00000414670 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.49□□□□□ -0.89
ITGB1-203ENST00000414670 HNRNPUL2Q1KMD3 747 aaKnown RBP9.49□□□□□ -0.89
ITGB1-203ENST00000414670 ERCC6L2Q5T890 1561 aa9.49□□□□□ -0.89
ITGB1-203ENST00000414670 CDK11AQ9UQ88 783 aaPredicted RBP9.48□□□□□ -0.89
ITGB1-203ENST00000414670 RAPGEF6Q8TEU7 1601 aa9.48□□□□□ -0.89
ITGB1-203ENST00000414670 UACAQ9BZF9 1416 aa9.48□□□□□ -0.89
ITGB1-203ENST00000414670 ABCA8O94911 1581 aa9.47□□□□□ -0.89
ITGB1-203ENST00000414670 CFAP43Q8NDM7 1665 aa9.47□□□□□ -0.89
ITGB1-203ENST00000414670 CDK13Q14004 1512 aaKnown RBP9.46□□□□□ -0.89
ITGB1-203ENST00000414670 ATP10BO94823 1461 aa9.44□□□□□ -0.9
ITGB1-203ENST00000414670 EHBP1L1Q8N3D4 1523 aa9.44□□□□□ -0.9
ITGB1-203ENST00000414670 RRBP1Q9P2E9 1410 aaKnown RBP9.43□□□□□ -0.9
ITGB1-203ENST00000414670 PHLDB1Q86UU1 1377 aa9.43□□□□□ -0.9
ITGB1-203ENST00000414670 PLEKHD1A6NEE1 506 aa9.43□□□□□ -0.9
ITGB1-203ENST00000414670 MAGI3Q5TCQ9 1506 aa9.42□□□□□ -0.9
ITGB1-203ENST00000414670 ABCC2Q92887 1545 aa9.42□□□□□ -0.9
ITGB1-203ENST00000414670 UHRF1BP1LA0JNW5 1464 aa9.42□□□□□ -0.9
ITGB1-203ENST00000414670 NCOA2Q15596 1464 aa9.42□□□□□ -0.9
ITGB1-203ENST00000414670 CCNB3Q8WWL7 1395 aa9.42□□□□□ -0.9
ITGB1-203ENST00000414670 TROQ12816 1431 aaPredicted RBP9.41□□□□□ -0.9
ITGB1-203ENST00000414670 LRRIQ1Q96JM4 1722 aa9.4□□□□□ -0.9
ITGB1-203ENST00000414670 MYOM3Q5VTT5 1437 aa9.39□□□□□ -0.91
ITGB1-203ENST00000414670 ARHGEF11O15085 1522 aa9.38□□□□□ -0.91
ITGB1-203ENST00000414670 FAM50AQ14320 339 aaKnown RBP9.38□□□□□ -0.91
ITGB1-203ENST00000414670 KDM5BQ9UGL1 1544 aa9.37□□□□□ -0.91
ITGB1-203ENST00000414670 FGD6Q6ZV73 1430 aa9.37□□□□□ -0.91
ITGB1-203ENST00000414670 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.37□□□□□ -0.91
ITGB1-203ENST00000414670 SUPT6HQ7KZ85 1726 aaKnown RBP9.36□□□□□ -0.91
ITGB1-203ENST00000414670 NPM1P06748 294 aaKnown RBP eCLIP9.35□□□□□ -0.91
ITGB1-203ENST00000414670 MIA2Q96PC5 1412 aa9.35□□□□□ -0.91
ITGB1-203ENST00000414670 ITGAEP38570 1179 aa9.34□□□□□ -0.91
ITGB1-203ENST00000414670 CYB5RLQ6IPT4 315 aa9.33□□□□□ -0.92
ITGB1-203ENST00000414670 CFDP1Q9UEE9 299 aaPredicted RBP9.33□□□□□ -0.92
ITGB1-203ENST00000414670 ADCY10Q96PN6 1610 aa9.33□□□□□ -0.92
ITGB1-203ENST00000414670 GPATCH8Q9UKJ3 1502 aaKnown RBP9.32□□□□□ -0.92
ITGB1-203ENST00000414670 KCNH8Q96L42 1107 aa9.32□□□□□ -0.92
ITGB1-203ENST00000414670 ABCC10Q5T3U5 1492 aa9.32□□□□□ -0.92
ITGB1-203ENST00000414670 KIF14Q15058 1648 aa9.31□□□□□ -0.92
ITGB1-203ENST00000414670 TCOF1Q13428 1488 aaKnown RBP9.31□□□□□ -0.92
ITGB1-203ENST00000414670 ZCCHC11Q5TAX3 1644 aaKnown RBP9.31□□□□□ -0.92
ITGB1-203ENST00000414670 WDR7Q9Y4E6 1490 aa9.29□□□□□ -0.92
ITGB1-203ENST00000414670 PPP6R1Q9UPN7 881 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms