RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 CHD1O14646 1710 aa16.17■□□□□ 0.18
DDB1-202ENST00000414411 SLC24A1O60721 1099 aa16.17■□□□□ 0.18
DDB1-202ENST00000414411 GOLGA3Q08378 1498 aa16.13■□□□□ 0.17
DDB1-202ENST00000414411 LOC105371045A0A1W2PR82 267 aa16.13■□□□□ 0.17
DDB1-202ENST00000414411 NUP160Q12769 1436 aa16.12■□□□□ 0.17
DDB1-202ENST00000414411 EHMT2Q96KQ7 1210 aa16.11■□□□□ 0.17
DDB1-202ENST00000414411 CEP170Q5SW79 1584 aa16.09■□□□□ 0.17
DDB1-202ENST00000414411 OSCARQ8IYS5 282 aa16.09■□□□□ 0.17
DDB1-202ENST00000414411 UBTFP17480 764 aaKnown RBP16.07■□□□□ 0.16
DDB1-202ENST00000414411 KIAA0586Q9BVV6 1533 aa16.05■□□□□ 0.16
DDB1-202ENST00000414411 TNIKQ9UKE5 1360 aa16.04■□□□□ 0.16
DDB1-202ENST00000414411 CTTNBP2Q8WZ74 1663 aa16.02■□□□□ 0.16
DDB1-202ENST00000414411 CLASP1Q7Z460 1538 aa16.02■□□□□ 0.16
DDB1-202ENST00000414411 IQGAP2Q13576 1575 aa15.99■□□□□ 0.15
DDB1-202ENST00000414411 JPH4Q96JJ6 628 aa15.98■□□□□ 0.15
DDB1-202ENST00000414411 SHROOM2Q13796 1616 aa15.95■□□□□ 0.14
DDB1-202ENST00000414411 UGGT2Q9NYU1 1516 aa15.94■□□□□ 0.14
DDB1-202ENST00000414411 RANGAP1P46060 587 aaPredicted RBP15.89■□□□□ 0.13
DDB1-202ENST00000414411 PRG4Q92954 1404 aaPredicted RBP15.89■□□□□ 0.13
DDB1-202ENST00000414411 DISP1Q96F81 1524 aa15.89■□□□□ 0.13
DDB1-202ENST00000414411 CEP162Q5TB80 1403 aa15.88■□□□□ 0.13
DDB1-202ENST00000414411 SAMD9Q5K651 1589 aa15.87■□□□□ 0.13
DDB1-202ENST00000414411 CLIP1P30622 1438 aa15.86■□□□□ 0.13
DDB1-202ENST00000414411 ARHGAP35Q9NRY4 1499 aa15.86■□□□□ 0.13
DDB1-202ENST00000414411 ERCC6L2Q5T890 1561 aa15.85■□□□□ 0.13
DDB1-202ENST00000414411 EFCAB5A4FU69 1503 aa15.85■□□□□ 0.13
DDB1-202ENST00000414411 CARMIL2Q6F5E8 1435 aa15.84■□□□□ 0.13
DDB1-202ENST00000414411 KIAA0556O60303 1618 aa15.83■□□□□ 0.13
DDB1-202ENST00000414411 P3H3Q8IVL6 736 aa15.82■□□□□ 0.12
DDB1-202ENST00000414411 ARHGEF11O15085 1522 aa15.8■□□□□ 0.12
DDB1-202ENST00000414411 ARAP1Q96P48 1450 aa15.8■□□□□ 0.12
DDB1-202ENST00000414411 DNAJC5Q9H3Z4 198 aa15.78■□□□□ 0.12
DDB1-202ENST00000414411 FHOD3Q2V2M9 1422 aa15.78■□□□□ 0.12
DDB1-202ENST00000414411 RIMBP3CA6NJZ7 1639 aa15.75■□□□□ 0.11
DDB1-202ENST00000414411 RIMBP3BA6NNM3 1639 aa15.75■□□□□ 0.11
DDB1-202ENST00000414411 RIMBP3Q9UFD9 1639 aa15.75■□□□□ 0.11
DDB1-202ENST00000414411 PTPRGP23470 1445 aa15.75■□□□□ 0.11
DDB1-202ENST00000414411 FMN1Q68DA7 1419 aa15.71■□□□□ 0.11
DDB1-202ENST00000414411 TTBK1Q5TCY1 1321 aaPredicted RBP15.7■□□□□ 0.1
DDB1-202ENST00000414411 VPS8Q8N3P4 1428 aa15.67■□□□□ 0.1
DDB1-202ENST00000414411 PLB1Q6P1J6 1458 aa15.66■□□□□ 0.1
DDB1-202ENST00000414411 UACAQ9BZF9 1416 aa15.66■□□□□ 0.1
DDB1-202ENST00000414411 ABCA8O94911 1581 aa15.66■□□□□ 0.1
DDB1-202ENST00000414411 CYB5RLQ6IPT4 315 aa15.65■□□□□ 0.1
DDB1-202ENST00000414411 CASKIN1Q8WXD9 1431 aa15.64■□□□□ 0.09
DDB1-202ENST00000414411 RAPGEF6Q8TEU7 1601 aa15.63■□□□□ 0.09
DDB1-202ENST00000414411 KCNA4P22459 653 aa15.62■□□□□ 0.09
DDB1-202ENST00000414411 PCGF6Q9BYE7 350 aa15.62■□□□□ 0.09
DDB1-202ENST00000414411 UHRF1BP1LA0JNW5 1464 aa15.62■□□□□ 0.09
DDB1-202ENST00000414411 PCF11O94913 1555 aaKnown RBP15.61■□□□□ 0.09
DDB1-202ENST00000414411 ABCC2Q92887 1545 aa15.6■□□□□ 0.09
DDB1-202ENST00000414411 NUP153P49790 1475 aaKnown RBP15.6■□□□□ 0.09
DDB1-202ENST00000414411 FYCO1Q9BQS8 1478 aa15.6■□□□□ 0.09
DDB1-202ENST00000414411 ADCY10Q96PN6 1610 aa15.59■□□□□ 0.09
DDB1-202ENST00000414411 HECW1Q76N89 1606 aa15.56■□□□□ 0.08
DDB1-202ENST00000414411 ATP1B4Q9UN42 357 aaPredicted RBP15.56■□□□□ 0.08
DDB1-202ENST00000414411 KDM5BQ9UGL1 1544 aa15.56■□□□□ 0.08
DDB1-202ENST00000414411 LRRIQ1Q96JM4 1722 aa15.55■□□□□ 0.08
DDB1-202ENST00000414411 HRCP23327 699 aa15.55■□□□□ 0.08
DDB1-202ENST00000414411 ATP10BO94823 1461 aa15.55■□□□□ 0.08
DDB1-202ENST00000414411 EPRSP07814 1512 aaKnown RBP15.55■□□□□ 0.08
DDB1-202ENST00000414411 PIAS4Q8N2W9 510 aaPredicted RBP15.55■□□□□ 0.08
DDB1-202ENST00000414411 ARID3CA6NKF2 412 aa15.52■□□□□ 0.07
DDB1-202ENST00000414411 CCDC18Q5T9S5 1454 aa15.51■□□□□ 0.07
DDB1-202ENST00000414411 MAP3K1Q13233 1512 aa15.51■□□□□ 0.07
DDB1-202ENST00000414411 CDK13Q14004 1512 aaKnown RBP15.51■□□□□ 0.07
DDB1-202ENST00000414411 ZCCHC11Q5TAX3 1644 aaKnown RBP15.49■□□□□ 0.07
DDB1-202ENST00000414411 NPM1P06748 294 aaKnown RBP eCLIP15.49■□□□□ 0.07
DDB1-202ENST00000414411 TIAM1Q13009 1591 aa15.47■□□□□ 0.07
DDB1-202ENST00000414411 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.47■□□□□ 0.07
DDB1-202ENST00000414411 TRIM26Q12899 539 aaPredicted RBP15.47■□□□□ 0.07
DDB1-202ENST00000414411 HNRNPUL2Q1KMD3 747 aaKnown RBP15.47■□□□□ 0.07
DDB1-202ENST00000414411 APLP2Q06481 763 aa15.46■□□□□ 0.07
DDB1-202ENST00000414411 CFAP43Q8NDM7 1665 aa15.45■□□□□ 0.06
DDB1-202ENST00000414411 KANK4Q5T7N3 995 aaPredicted RBP15.45■□□□□ 0.06
DDB1-202ENST00000414411 CDK11AQ9UQ88 783 aaPredicted RBP15.45■□□□□ 0.06
DDB1-202ENST00000414411 PLEKHD1A6NEE1 506 aa15.44■□□□□ 0.06
DDB1-202ENST00000414411 MAGI3Q5TCQ9 1506 aa15.43■□□□□ 0.06
DDB1-202ENST00000414411 MAPKBP1O60336 1514 aa15.42■□□□□ 0.06
DDB1-202ENST00000414411 ASXL2Q76L83 1435 aa15.42■□□□□ 0.06
DDB1-202ENST00000414411 LRRC9Q6ZRR7 1453 aa15.42■□□□□ 0.06
DDB1-202ENST00000414411 TROQ12816 1431 aaPredicted RBP15.4■□□□□ 0.06
DDB1-202ENST00000414411 MTUS2Q5JR59 1369 aa15.39■□□□□ 0.05
DDB1-202ENST00000414411 WDR7Q9Y4E6 1490 aa15.39■□□□□ 0.05
DDB1-202ENST00000414411 EHBP1L1Q8N3D4 1523 aa15.36■□□□□ 0.05
DDB1-202ENST00000414411 PPARGC1BQ86YN6 1023 aaKnown RBP15.35■□□□□ 0.05
DDB1-202ENST00000414411 KCNH8Q96L42 1107 aa15.35■□□□□ 0.05
DDB1-202ENST00000414411 KIF14Q15058 1648 aa15.32■□□□□ 0.04
DDB1-202ENST00000414411 ABCC10Q5T3U5 1492 aa15.31■□□□□ 0.04
DDB1-202ENST00000414411 NCOA2Q15596 1464 aa15.3■□□□□ 0.04
DDB1-202ENST00000414411 SUPT6HQ7KZ85 1726 aaKnown RBP15.3■□□□□ 0.04
DDB1-202ENST00000414411 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.29■□□□□ 0.04
DDB1-202ENST00000414411 PPP4R3CPQ6ZMV5 832 aa15.29■□□□□ 0.04
DDB1-202ENST00000414411 GLI2P10070 1586 aa15.28■□□□□ 0.04
DDB1-202ENST00000414411 DIP2BQ9P265 1576 aa15.28■□□□□ 0.04
DDB1-202ENST00000414411 ABCA9Q8IUA7 1624 aa15.27■□□□□ 0.04
DDB1-202ENST00000414411 FAM69CQ0P6D2 419 aa15.27■□□□□ 0.03
DDB1-202ENST00000414411 TTC37Q6PGP7 1564 aa15.27■□□□□ 0.03
DDB1-202ENST00000414411 PHLDB1Q86UU1 1377 aa15.26■□□□□ 0.03
DDB1-202ENST00000414411 KIF13AQ9H1H9 1805 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms