RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 RIMBP3CA6NJZ7 1639 aa27.32■■□□□ 1.96
LINC00398-201ENST00000414407 RIMBP3BA6NNM3 1639 aa27.32■■□□□ 1.96
LINC00398-201ENST00000414407 SHROOM2Q13796 1616 aa27.32■■□□□ 1.96
LINC00398-201ENST00000414407 RIMBP3Q9UFD9 1639 aa27.32■■□□□ 1.96
LINC00398-201ENST00000414407 JPH4Q96JJ6 628 aa27.3■■□□□ 1.96
LINC00398-201ENST00000414407 KIF21BO75037 1637 aa27.23■■□□□ 1.95
LINC00398-201ENST00000414407 IQGAP2Q13576 1575 aa27.22■■□□□ 1.95
LINC00398-201ENST00000414407 PRG4Q92954 1404 aaPredicted RBP27.21■■□□□ 1.95
LINC00398-201ENST00000414407 ARAP1Q96P48 1450 aa27.16■■□□□ 1.94
LINC00398-201ENST00000414407 CTTNBP2Q8WZ74 1663 aa27.15■■□□□ 1.94
LINC00398-201ENST00000414407 ERCC6L2Q5T890 1561 aa27.14■■□□□ 1.94
LINC00398-201ENST00000414407 UGGT2Q9NYU1 1516 aa27.11■■□□□ 1.93
LINC00398-201ENST00000414407 CYB5RLQ6IPT4 315 aa27.1■■□□□ 1.93
LINC00398-201ENST00000414407 GOLGA3Q08378 1498 aa27.09■■□□□ 1.93
LINC00398-201ENST00000414407 CARMIL2Q6F5E8 1435 aa27.08■■□□□ 1.93
LINC00398-201ENST00000414407 DISP1Q96F81 1524 aa27.02■■□□□ 1.92
LINC00398-201ENST00000414407 UBTFP17480 764 aaKnown RBP26.98■■□□□ 1.91
LINC00398-201ENST00000414407 TNIKQ9UKE5 1360 aa26.97■■□□□ 1.91
LINC00398-201ENST00000414407 KIAA0556O60303 1618 aa26.94■■□□□ 1.9
LINC00398-201ENST00000414407 PTPRGP23470 1445 aa26.92■■□□□ 1.9
LINC00398-201ENST00000414407 EHMT2Q96KQ7 1210 aa26.91■■□□□ 1.9
LINC00398-201ENST00000414407 SAMD9Q5K651 1589 aa26.85■■□□□ 1.89
LINC00398-201ENST00000414407 EFCAB5A4FU69 1503 aa26.81■■□□□ 1.88
LINC00398-201ENST00000414407 TTBK1Q5TCY1 1321 aaPredicted RBP26.77■■□□□ 1.88
LINC00398-201ENST00000414407 RANGAP1P46060 587 aaPredicted RBP26.77■■□□□ 1.88
LINC00398-201ENST00000414407 UACAQ9BZF9 1416 aa26.76■■□□□ 1.87
LINC00398-201ENST00000414407 P3H3Q8IVL6 736 aa26.75■■□□□ 1.87
LINC00398-201ENST00000414407 UHRF1BP1LA0JNW5 1464 aa26.74■■□□□ 1.87
LINC00398-201ENST00000414407 ADCY10Q96PN6 1610 aa26.73■■□□□ 1.87
LINC00398-201ENST00000414407 NPM1P06748 294 aaKnown RBP eCLIP26.69■■□□□ 1.86
LINC00398-201ENST00000414407 ABCC2Q92887 1545 aa26.69■■□□□ 1.86
LINC00398-201ENST00000414407 FHOD3Q2V2M9 1422 aa26.68■■□□□ 1.86
LINC00398-201ENST00000414407 ARHGAP35Q9NRY4 1499 aa26.68■■□□□ 1.86
LINC00398-201ENST00000414407 PLB1Q6P1J6 1458 aa26.66■■□□□ 1.86
LINC00398-201ENST00000414407 ABCA8O94911 1581 aa26.66■■□□□ 1.86
LINC00398-201ENST00000414407 LOC105371045A0A1W2PR82 267 aa26.64■■□□□ 1.86
LINC00398-201ENST00000414407 KDM5BQ9UGL1 1544 aa26.6■■□□□ 1.85
LINC00398-201ENST00000414407 CLIP1P30622 1438 aa26.6■■□□□ 1.85
LINC00398-201ENST00000414407 MAPKBP1O60336 1514 aa26.58■■□□□ 1.85
LINC00398-201ENST00000414407 FMN1Q68DA7 1419 aa26.57■■□□□ 1.84
LINC00398-201ENST00000414407 RAPGEF6Q8TEU7 1601 aa26.54■■□□□ 1.84
LINC00398-201ENST00000414407 CEP162Q5TB80 1403 aa26.53■■□□□ 1.84
LINC00398-201ENST00000414407 ZCCHC11Q5TAX3 1644 aaKnown RBP26.48■■□□□ 1.83
LINC00398-201ENST00000414407 TRHP20396 242 aaPredicted RBP26.46■■□□□ 1.83
LINC00398-201ENST00000414407 NUP153P49790 1475 aaKnown RBP26.46■■□□□ 1.83
LINC00398-201ENST00000414407 ASXL2Q76L83 1435 aa26.45■■□□□ 1.82
LINC00398-201ENST00000414407 ATP10BO94823 1461 aa26.44■■□□□ 1.82
LINC00398-201ENST00000414407 ABCC10Q5T3U5 1492 aa26.42■■□□□ 1.82
LINC00398-201ENST00000414407 CASKIN1Q8WXD9 1431 aa26.38■■□□□ 1.81
LINC00398-201ENST00000414407 HECW1Q76N89 1606 aa26.37■■□□□ 1.81
LINC00398-201ENST00000414407 WDR7Q9Y4E6 1490 aa26.36■■□□□ 1.81
LINC00398-201ENST00000414407 ARID3CA6NKF2 412 aa26.35■■□□□ 1.81
LINC00398-201ENST00000414407 DIP2BQ9P265 1576 aa26.34■■□□□ 1.81
LINC00398-201ENST00000414407 FAM69CQ0P6D2 419 aa26.33■■□□□ 1.81
LINC00398-201ENST00000414407 FYCO1Q9BQS8 1478 aa26.32■■□□□ 1.8
LINC00398-201ENST00000414407 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.32■■□□□ 1.8
LINC00398-201ENST00000414407 HNRNPUL2Q1KMD3 747 aaKnown RBP26.32■■□□□ 1.8
LINC00398-201ENST00000414407 EPRSP07814 1512 aaKnown RBP26.31■■□□□ 1.8
LINC00398-201ENST00000414407 ATP1B4Q9UN42 357 aaPredicted RBP26.31■■□□□ 1.8
LINC00398-201ENST00000414407 PCF11O94913 1555 aaKnown RBP26.3■■□□□ 1.8
LINC00398-201ENST00000414407 KIF13AQ9H1H9 1805 aa26.3■■□□□ 1.8
LINC00398-201ENST00000414407 GLI2P10070 1586 aa26.29■■□□□ 1.8
LINC00398-201ENST00000414407 PLEKHD1A6NEE1 506 aa26.27■■□□□ 1.8
LINC00398-201ENST00000414407 CDK13Q14004 1512 aaKnown RBP26.25■■□□□ 1.79
LINC00398-201ENST00000414407 CCDC18Q5T9S5 1454 aa26.25■■□□□ 1.79
LINC00398-201ENST00000414407 CDK11AQ9UQ88 783 aaPredicted RBP26.23■■□□□ 1.79
LINC00398-201ENST00000414407 VPS8Q8N3P4 1428 aa26.22■■□□□ 1.79
LINC00398-201ENST00000414407 KCNH8Q96L42 1107 aa26.21■■□□□ 1.79
LINC00398-201ENST00000414407 LRRIQ1Q96JM4 1722 aa26.18■■□□□ 1.78
LINC00398-201ENST00000414407 MAP3K4Q9Y6R4 1608 aa26.14■■□□□ 1.77
LINC00398-201ENST00000414407 TROQ12816 1431 aaPredicted RBP26.12■■□□□ 1.77
LINC00398-201ENST00000414407 CFAP43Q8NDM7 1665 aa26.11■■□□□ 1.77
LINC00398-201ENST00000414407 ABCA9Q8IUA7 1624 aa26.1■■□□□ 1.77
LINC00398-201ENST00000414407 CD109Q6YHK3 1445 aa26.1■■□□□ 1.77
LINC00398-201ENST00000414407 MAGI3Q5TCQ9 1506 aa26.06■■□□□ 1.76
LINC00398-201ENST00000414407 TEX14Q8IWB6 1497 aa26.04■■□□□ 1.76
LINC00398-201ENST00000414407 PPRC1Q5VV67 1664 aaKnown RBP26.03■■□□□ 1.76
LINC00398-201ENST00000414407 TSPOAP1O95153 1857 aa26.03■■□□□ 1.76
LINC00398-201ENST00000414407 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.03■■□□□ 1.76
LINC00398-201ENST00000414407 MAP3K1Q13233 1512 aa26.01■■□□□ 1.75
LINC00398-201ENST00000414407 KIF14Q15058 1648 aa26.01■■□□□ 1.75
LINC00398-201ENST00000414407 MTUS2Q5JR59 1369 aa25.98■■□□□ 1.75
LINC00398-201ENST00000414407 TIAM1Q13009 1591 aa25.98■■□□□ 1.75
LINC00398-201ENST00000414407 TTC37Q6PGP7 1564 aa25.96■■□□□ 1.75
LINC00398-201ENST00000414407 PHLDB1Q86UU1 1377 aa25.94■■□□□ 1.74
LINC00398-201ENST00000414407 EHBP1L1Q8N3D4 1523 aa25.93■■□□□ 1.74
LINC00398-201ENST00000414407 PLCH2O75038 1416 aa25.92■■□□□ 1.74
LINC00398-201ENST00000414407 APLP2Q06481 763 aa25.91■■□□□ 1.74
LINC00398-201ENST00000414407 ARAP3Q8WWN8 1544 aa25.9■■□□□ 1.74
LINC00398-201ENST00000414407 NEO1Q92859 1461 aa25.9■■□□□ 1.74
LINC00398-201ENST00000414407 LRRC9Q6ZRR7 1453 aa25.88■■□□□ 1.73
LINC00398-201ENST00000414407 MYO5CQ9NQX4 1742 aa25.85■■□□□ 1.73
LINC00398-201ENST00000414407 KDM6BO15054 1643 aa25.85■■□□□ 1.73
LINC00398-201ENST00000414407 FANCAO15360 1455 aa25.85■■□□□ 1.73
LINC00398-201ENST00000414407 CFAP74Q9C0B2 1584 aa25.83■■□□□ 1.73
LINC00398-201ENST00000414407 EFCAB2Q5VUJ9 269 aa25.83■■□□□ 1.73
LINC00398-201ENST00000414407 KANK4Q5T7N3 995 aaPredicted RBP25.81■■□□□ 1.72
LINC00398-201ENST00000414407 AKNAQ7Z591 1439 aa25.8■■□□□ 1.72
LINC00398-201ENST00000414407 COL17A1Q9UMD9 1497 aaPredicted RBP25.8■■□□□ 1.72
LINC00398-201ENST00000414407 CCNB3Q8WWL7 1395 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms