RNA–Protein interactions for RNA: ENST00000414120.1

LINC00887-202, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 2,880 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-202ENST00000414120 URB2Q14146 1524 aaKnown RBP19.56■□□□□ 0.72
LINC00887-202ENST00000414120 TAF7LQ5H9L4 462 aa19.54■□□□□ 0.72
LINC00887-202ENST00000414120 CCER1Q8TC90 406 aaPredicted RBP19.54■□□□□ 0.72
LINC00887-202ENST00000414120 AAMPQ13685 434 aa19.53■□□□□ 0.72
LINC00887-202ENST00000414120 CUX1P39880 1505 aa19.5■□□□□ 0.71
LINC00887-202ENST00000414120 TOPBP1Q92547 1522 aa19.5■□□□□ 0.71
LINC00887-202ENST00000414120 RSPH6AQ9H0K4 717 aa19.48■□□□□ 0.71
LINC00887-202ENST00000414120 THOC2Q8NI27 1593 aaKnown RBP19.46■□□□□ 0.71
LINC00887-202ENST00000414120 MIER1Q8N108 512 aa19.46■□□□□ 0.71
LINC00887-202ENST00000414120 SYNJ1O43426 1573 aa19.45■□□□□ 0.7
LINC00887-202ENST00000414120 C11orf95C9JLR9 678 aaPredicted RBP19.44■□□□□ 0.7
LINC00887-202ENST00000414120 DNMBPQ6XZF7 1577 aa19.43■□□□□ 0.7
LINC00887-202ENST00000414120 FGD5Q6ZNL6 1462 aa19.42■□□□□ 0.7
LINC00887-202ENST00000414120 WDR62O43379 1518 aa19.41■□□□□ 0.7
LINC00887-202ENST00000414120 RAD54L2Q9Y4B4 1467 aa19.4■□□□□ 0.7
LINC00887-202ENST00000414120 IL27Q8NEV9 243 aa19.4■□□□□ 0.7
LINC00887-202ENST00000414120 POLA1P09884 1462 aaPredicted RBP19.39■□□□□ 0.69
LINC00887-202ENST00000414120 SOGA1O94964 1423 aa19.38■□□□□ 0.69
LINC00887-202ENST00000414120 RBM10P98175 930 aaKnown RBP19.36■□□□□ 0.69
LINC00887-202ENST00000414120 BCL11BQ9C0K0 894 aaPredicted RBP19.35■□□□□ 0.69
LINC00887-202ENST00000414120 TOP2BQ02880 1626 aa19.34■□□□□ 0.69
LINC00887-202ENST00000414120 TDRD9Q8NDG6 1382 aaKnown RBP19.33■□□□□ 0.69
LINC00887-202ENST00000414120 CUX2O14529 1486 aa19.32■□□□□ 0.68
LINC00887-202ENST00000414120 VSIG10Q8N0Z9 540 aa19.31■□□□□ 0.68
LINC00887-202ENST00000414120 EHMT2Q96KQ7 1210 aa19.3■□□□□ 0.68
LINC00887-202ENST00000414120 BIVM-ERCC5R4GMW8 1640 aa19.27■□□□□ 0.67
LINC00887-202ENST00000414120 TIMELESSQ9UNS1 1208 aa19.26■□□□□ 0.67
LINC00887-202ENST00000414120 ZNF608Q9ULD9 1512 aaPredicted RBP19.26■□□□□ 0.67
LINC00887-202ENST00000414120 ZNF326Q5BKZ1 582 aaKnown RBP19.26■□□□□ 0.67
LINC00887-202ENST00000414120 HOMEZQ8IX15 550 aa19.26■□□□□ 0.67
LINC00887-202ENST00000414120 AQRO60306 1485 aaKnown RBP eCLIP19.25■□□□□ 0.67
LINC00887-202ENST00000414120 IFT140Q96RY7 1462 aa19.24■□□□□ 0.67
LINC00887-202ENST00000414120 A0A0U1RQG5 324 aaPredicted RBP19.22■□□□□ 0.67
LINC00887-202ENST00000414120 LOC105371045A0A1W2PR82 267 aa19.19■□□□□ 0.66
LINC00887-202ENST00000414120 FBLN2P98095 1184 aa19.19■□□□□ 0.66
LINC00887-202ENST00000414120 RUSC2Q8N2Y8 1516 aa19.17■□□□□ 0.66
LINC00887-202ENST00000414120 RSPH4AQ5TD94 716 aa19.16■□□□□ 0.66
LINC00887-202ENST00000414120 RTN4Q9NQC3 1192 aaKnown RBP19.16■□□□□ 0.66
LINC00887-202ENST00000414120 RTL5Q5HYW3 569 aaPredicted RBP19.16■□□□□ 0.66
LINC00887-202ENST00000414120 TARBP1Q13395 1621 aaKnown RBP19.15■□□□□ 0.66
LINC00887-202ENST00000414120 ABCA10Q8WWZ4 1543 aa19.14■□□□□ 0.65
LINC00887-202ENST00000414120 WASHC2CQ9Y4E1 1318 aa19.14■□□□□ 0.65
LINC00887-202ENST00000414120 KIF27Q86VH2 1401 aa19.14■□□□□ 0.65
LINC00887-202ENST00000414120 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.12■□□□□ 0.65
LINC00887-202ENST00000414120 GAPVD1Q14C86 1478 aa19.12■□□□□ 0.65
LINC00887-202ENST00000414120 WASHC2AQ641Q2 1341 aa19.1■□□□□ 0.65
LINC00887-202ENST00000414120 NOP58Q9Y2X3 529 aaKnown RBP19.1■□□□□ 0.65
LINC00887-202ENST00000414120 BRD2P25440 801 aaKnown RBP19.08■□□□□ 0.65
LINC00887-202ENST00000414120 EIF4G3O43432 1585 aaKnown RBP19.07■□□□□ 0.64
LINC00887-202ENST00000414120 RRP9O43818 475 aaKnown RBP19.07■□□□□ 0.64
LINC00887-202ENST00000414120 CHMP7Q8WUX9 453 aaPredicted RBP19.03■□□□□ 0.64
LINC00887-202ENST00000414120 USP35Q9P2H5 1018 aa19.03■□□□□ 0.64
LINC00887-202ENST00000414120 GRIN2BQ13224 1484 aa19.02■□□□□ 0.64
LINC00887-202ENST00000414120 CDK11AQ9UQ88 783 aaPredicted RBP19.02■□□□□ 0.64
LINC00887-202ENST00000414120 FKBP8Q14318 412 aa19.02■□□□□ 0.63
LINC00887-202ENST00000414120 IGF1RP08069 1367 aa19.01■□□□□ 0.63
LINC00887-202ENST00000414120 SNAPC4Q5SXM2 1469 aa19.01■□□□□ 0.63
LINC00887-202ENST00000414120 WDR97A6NE52 1622 aa19■□□□□ 0.63
LINC00887-202ENST00000414120 FAM43AQ8N2R8 423 aa18.98■□□□□ 0.63
LINC00887-202ENST00000414120 ABCA5Q8WWZ7 1642 aa18.97■□□□□ 0.63
LINC00887-202ENST00000414120 CARMIL1Q5VZK9 1371 aa18.95■□□□□ 0.62
LINC00887-202ENST00000414120 AEBP2Q6ZN18 517 aaPredicted RBP18.93■□□□□ 0.62
LINC00887-202ENST00000414120 UBTFP17480 764 aaKnown RBP18.92■□□□□ 0.62
LINC00887-202ENST00000414120 NBR1Q14596 966 aa18.92■□□□□ 0.62
LINC00887-202ENST00000414120 EEA1Q15075 1411 aa18.91■□□□□ 0.62
LINC00887-202ENST00000414120 BCANQ96GW7 911 aa18.91■□□□□ 0.62
LINC00887-202ENST00000414120 PBRM1Q86U86 1689 aa18.9■□□□□ 0.62
LINC00887-202ENST00000414120 ERICH3Q5RHP9 1530 aa18.88■□□□□ 0.61
LINC00887-202ENST00000414120 HSP90AA2PQ14568 343 aaPredicted RBP18.88■□□□□ 0.61
LINC00887-202ENST00000414120 NAP1L5Q96NT1 182 aaPredicted RBP18.87■□□□□ 0.61
LINC00887-202ENST00000414120 MAGI1Q96QZ7 1491 aaPredicted RBP18.87■□□□□ 0.61
LINC00887-202ENST00000414120 FHAD1B1AJZ9 1412 aa18.87■□□□□ 0.61
LINC00887-202ENST00000414120 CENPJQ9HC77 1338 aaPredicted RBP18.86■□□□□ 0.61
LINC00887-202ENST00000414120 CALD1Q05682 793 aaKnown RBP18.84■□□□□ 0.61
LINC00887-202ENST00000414120 CHMP4AQ9BY43 222 aa18.83■□□□□ 0.61
LINC00887-202ENST00000414120 NAP1L2Q9ULW6 460 aaPredicted RBP18.83■□□□□ 0.61
LINC00887-202ENST00000414120 SYNJ2O15056 1496 aa18.83■□□□□ 0.61
LINC00887-202ENST00000414120 TULP1O00294 542 aaPredicted RBP18.83■□□□□ 0.6
LINC00887-202ENST00000414120 IPO4Q8TEX9 1081 aaKnown RBP18.83■□□□□ 0.6
LINC00887-202ENST00000414120 RAPGEF2Q9Y4G8 1499 aa18.82■□□□□ 0.6
LINC00887-202ENST00000414120 OSCARQ8IYS5 282 aa18.81■□□□□ 0.6
LINC00887-202ENST00000414120 ADAMTS12P58397 1594 aa18.81■□□□□ 0.6
LINC00887-202ENST00000414120 PLPPR3Q6T4P5 718 aa18.79■□□□□ 0.6
LINC00887-202ENST00000414120 GRIN2AQ12879 1464 aa18.78■□□□□ 0.6
LINC00887-202ENST00000414120 PRXQ9BXM0 1461 aa18.78■□□□□ 0.6
LINC00887-202ENST00000414120 NPM2Q86SE8 214 aaKnown RBP18.78■□□□□ 0.6
LINC00887-202ENST00000414120 PAXIP1Q6ZW49 1069 aaPredicted RBP18.76■□□□□ 0.59
LINC00887-202ENST00000414120 PRDM4Q9UKN5 801 aa18.76■□□□□ 0.59
LINC00887-202ENST00000414120 CUL7Q14999 1698 aa18.76■□□□□ 0.59
LINC00887-202ENST00000414120 CHD1O14646 1710 aa18.74■□□□□ 0.59
LINC00887-202ENST00000414120 BCCIPQ9P287 314 aaKnown RBP eCLIP18.73■□□□□ 0.59
LINC00887-202ENST00000414120 GOLGA3Q08378 1498 aa18.71■□□□□ 0.59
LINC00887-202ENST00000414120 PAK3O75914 559 aaPredicted RBP18.7■□□□□ 0.58
LINC00887-202ENST00000414120 P3H3Q8IVL6 736 aa18.69■□□□□ 0.58
LINC00887-202ENST00000414120 HSP90AA1P07900 732 aaKnown RBP18.69■□□□□ 0.58
LINC00887-202ENST00000414120 IPO9Q96P70 1041 aaKnown RBP18.69■□□□□ 0.58
LINC00887-202ENST00000414120 BRPF3Q9ULD4 1205 aa18.68■□□□□ 0.58
LINC00887-202ENST00000414120 SAMD1Q6SPF0 538 aaPredicted RBP18.67■□□□□ 0.58
LINC00887-202ENST00000414120 NEFMP07197 916 aa18.67■□□□□ 0.58
LINC00887-202ENST00000414120 NCLP19338 710 aaKnown RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms