RNA–Protein interactions for RNA: ENST00000414034.7

GHDC-202, Transcript of GH3 domain containing, humanhuman

TSL 2 BASIC

Gene GHDC, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-202ENST00000414034 PPP1R15AO75807 674 aaPredicted RBP24.45■■□□□ 1.51
GHDC-202ENST00000414034 RAB3GAP2Q9H2M9 1393 aa24.44■■□□□ 1.5
GHDC-202ENST00000414034 TRIM52Q96A61 297 aa24.43■■□□□ 1.5
GHDC-202ENST00000414034 ERICH6Q7L0X2 663 aa24.41■■□□□ 1.5
GHDC-202ENST00000414034 PRXQ9BXM0 1461 aa24.4■■□□□ 1.5
GHDC-202ENST00000414034 ANP32CO43423 234 aa24.4■■□□□ 1.5
GHDC-202ENST00000414034 WDR97A6NE52 1622 aa24.39■■□□□ 1.49
GHDC-202ENST00000414034 MYT1LQ9UL68 1186 aa24.36■■□□□ 1.49
GHDC-202ENST00000414034 TOP2BQ02880 1626 aa24.35■■□□□ 1.49
GHDC-202ENST00000414034 CDK11AQ9UQ88 783 aaPredicted RBP24.35■■□□□ 1.49
GHDC-202ENST00000414034 CADPSQ9ULU8 1353 aa24.34■■□□□ 1.49
GHDC-202ENST00000414034 LAMC3Q9Y6N6 1575 aa24.34■■□□□ 1.49
GHDC-202ENST00000414034 TIMELESSQ9UNS1 1208 aa24.34■■□□□ 1.49
GHDC-202ENST00000414034 SETD5Q9C0A6 1442 aa24.31■■□□□ 1.48
GHDC-202ENST00000414034 SIN3AQ96ST3 1273 aa24.26■■□□□ 1.47
GHDC-202ENST00000414034 KIF21AQ7Z4S6 1674 aa24.25■■□□□ 1.47
GHDC-202ENST00000414034 BIVM-ERCC5R4GMW8 1640 aa24.22■■□□□ 1.47
GHDC-202ENST00000414034 PDS5BQ9NTI5 1447 aa24.22■■□□□ 1.47
GHDC-202ENST00000414034 ARHGAP35Q9NRY4 1499 aa24.19■■□□□ 1.46
GHDC-202ENST00000414034 HIRIP3Q9BW71 556 aaPredicted RBP24.18■■□□□ 1.46
GHDC-202ENST00000414034 ERICH6BQ5W0A0 696 aa24.16■■□□□ 1.46
GHDC-202ENST00000414034 CFTRP13569 1480 aa24.15■■□□□ 1.46
GHDC-202ENST00000414034 THOC2Q8NI27 1593 aaKnown RBP24.15■■□□□ 1.46
GHDC-202ENST00000414034 MAP3K1Q13233 1512 aa24.13■■□□□ 1.45
GHDC-202ENST00000414034 DEKP35659 375 aaKnown RBP24.11■■□□□ 1.45
GHDC-202ENST00000414034 HNRNPUQ00839 825 aaKnown RBP eCLIP24.11■■□□□ 1.45
GHDC-202ENST00000414034 TIAM1Q13009 1591 aa24.1■■□□□ 1.45
GHDC-202ENST00000414034 KIF27Q86VH2 1401 aa24.09■■□□□ 1.45
GHDC-202ENST00000414034 IRX6P78412 446 aaPredicted RBP24.09■■□□□ 1.45
GHDC-202ENST00000414034 FANCD2Q9BXW9 1451 aa24.08■■□□□ 1.44
GHDC-202ENST00000414034 PPP4R2Q9NY27 417 aa24.06■■□□□ 1.44
GHDC-202ENST00000414034 PRKCSHP14314 528 aaPredicted RBP24.06■■□□□ 1.44
GHDC-202ENST00000414034 FAM50AQ14320 339 aaKnown RBP24.04■■□□□ 1.44
GHDC-202ENST00000414034 LRRC9Q6ZRR7 1453 aa24.02■■□□□ 1.44
GHDC-202ENST00000414034 PHLDB1Q86UU1 1377 aa24.02■■□□□ 1.44
GHDC-202ENST00000414034 MRC2Q9UBG0 1479 aa24■■□□□ 1.43
GHDC-202ENST00000414034 TONSLQ96HA7 1378 aa23.98■■□□□ 1.43
GHDC-202ENST00000414034 NOP58Q9Y2X3 529 aaKnown RBP23.92■■□□□ 1.42
GHDC-202ENST00000414034 CUX1P39880 1505 aa23.91■■□□□ 1.42
GHDC-202ENST00000414034 WDR62O43379 1518 aa23.91■■□□□ 1.42
GHDC-202ENST00000414034 URB2Q14146 1524 aaKnown RBP23.88■■□□□ 1.41
GHDC-202ENST00000414034 FHAD1B1AJZ9 1412 aa23.86■■□□□ 1.41
GHDC-202ENST00000414034 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.85■■□□□ 1.41
GHDC-202ENST00000414034 PRDM2Q13029 1718 aa23.84■■□□□ 1.41
GHDC-202ENST00000414034 B4GALNT3Q6L9W6 998 aa23.84■■□□□ 1.41
GHDC-202ENST00000414034 NBR1Q14596 966 aa23.83■■□□□ 1.4
GHDC-202ENST00000414034 CFAP43Q8NDM7 1665 aa23.82■■□□□ 1.4
GHDC-202ENST00000414034 PAK3O75914 559 aaPredicted RBP23.76■■□□□ 1.39
GHDC-202ENST00000414034 UACAQ9BZF9 1416 aa23.76■■□□□ 1.39
GHDC-202ENST00000414034 WASHC2AQ641Q2 1341 aa23.74■■□□□ 1.39
GHDC-202ENST00000414034 CCDC18Q5T9S5 1454 aa23.74■■□□□ 1.39
GHDC-202ENST00000414034 IGF1RP08069 1367 aa23.73■■□□□ 1.39
GHDC-202ENST00000414034 ZBED9Q6R2W3 1325 aa23.73■■□□□ 1.39
GHDC-202ENST00000414034 RTL5Q5HYW3 569 aaPredicted RBP23.71■■□□□ 1.39
GHDC-202ENST00000414034 DNAJC5Q9H3Z4 198 aa23.71■■□□□ 1.39
GHDC-202ENST00000414034 PCF11O94913 1555 aaKnown RBP23.71■■□□□ 1.39
GHDC-202ENST00000414034 ANP32AP39687 249 aaKnown RBP23.69■■□□□ 1.38
GHDC-202ENST00000414034 HFM1A2PYH4 1435 aa23.68■■□□□ 1.38
GHDC-202ENST00000414034 CNTLNQ9NXG0 1405 aa23.68■■□□□ 1.38
GHDC-202ENST00000414034 NCOA2Q15596 1464 aa23.68■■□□□ 1.38
GHDC-202ENST00000414034 HSPA5P11021 654 aaKnown RBP23.68■■□□□ 1.38
GHDC-202ENST00000414034 ATP1B4Q9UN42 357 aaPredicted RBP23.68■■□□□ 1.38
GHDC-202ENST00000414034 TOPBP1Q92547 1522 aa23.68■■□□□ 1.38
GHDC-202ENST00000414034 CCDC184Q52MB2 194 aa23.67■■□□□ 1.38
GHDC-202ENST00000414034 IPO9Q96P70 1041 aaKnown RBP23.67■■□□□ 1.38
GHDC-202ENST00000414034 KDM5BQ9UGL1 1544 aa23.67■■□□□ 1.38
GHDC-202ENST00000414034 ANO8Q9HCE9 1232 aaPredicted RBP23.67■■□□□ 1.38
GHDC-202ENST00000414034 CARMIL1Q5VZK9 1371 aa23.66■■□□□ 1.38
GHDC-202ENST00000414034 FAM9BQ8IZU0 186 aa23.66■■□□□ 1.38
GHDC-202ENST00000414034 FGD6Q6ZV73 1430 aa23.63■■□□□ 1.37
GHDC-202ENST00000414034 PRKRIP1Q9H875 184 aaPredicted RBP23.63■■□□□ 1.37
GHDC-202ENST00000414034 EIF4G2P78344 907 aaKnown RBP eCLIP23.62■■□□□ 1.37
GHDC-202ENST00000414034 MRS2Q9HD23 443 aa23.62■■□□□ 1.37
GHDC-202ENST00000414034 FYCO1Q9BQS8 1478 aa23.62■■□□□ 1.37
GHDC-202ENST00000414034 ZBTB47Q9UFB7 747 aaPredicted RBP23.62■■□□□ 1.37
GHDC-202ENST00000414034 PTPN23Q9H3S7 1636 aa23.61■■□□□ 1.37
GHDC-202ENST00000414034 P3H3Q8IVL6 736 aa23.58■■□□□ 1.37
GHDC-202ENST00000414034 DNMBPQ6XZF7 1577 aa23.57■■□□□ 1.36
GHDC-202ENST00000414034 ZNF608Q9ULD9 1512 aaPredicted RBP23.56■■□□□ 1.36
GHDC-202ENST00000414034 CASKIN1Q8WXD9 1431 aa23.56■■□□□ 1.36
GHDC-202ENST00000414034 NAIPQ13075 1403 aa23.55■■□□□ 1.36
GHDC-202ENST00000414034 PTPRKQ15262 1439 aa23.54■■□□□ 1.36
GHDC-202ENST00000414034 CCDC136Q96JN2 1154 aa23.54■■□□□ 1.36
GHDC-202ENST00000414034 AQRO60306 1485 aaKnown RBP eCLIP23.54■■□□□ 1.36
GHDC-202ENST00000414034 FGD5Q6ZNL6 1462 aa23.54■■□□□ 1.36
GHDC-202ENST00000414034 FMN1Q68DA7 1419 aa23.53■■□□□ 1.36
GHDC-202ENST00000414034 SALL2Q9Y467 1007 aaPredicted RBP23.52■■□□□ 1.36
GHDC-202ENST00000414034 SMG6Q86US8 1419 aaKnown RBP23.52■■□□□ 1.36
GHDC-202ENST00000414034 FHOD3Q2V2M9 1422 aa23.51■■□□□ 1.35
GHDC-202ENST00000414034 CCDC7Q96M83 1385 aa23.51■■□□□ 1.35
GHDC-202ENST00000414034 NCOA1Q15788 1441 aa23.5■■□□□ 1.35
GHDC-202ENST00000414034 POLA1P09884 1462 aaPredicted RBP23.49■■□□□ 1.35
GHDC-202ENST00000414034 IFT140Q96RY7 1462 aa23.49■■□□□ 1.35
GHDC-202ENST00000414034 EFCAB5A4FU69 1503 aa23.47■■□□□ 1.35
GHDC-202ENST00000414034 RNF123Q5XPI4 1314 aa23.47■■□□□ 1.35
GHDC-202ENST00000414034 RAD54L2Q9Y4B4 1467 aa23.47■■□□□ 1.35
GHDC-202ENST00000414034 AKNAQ7Z591 1439 aa23.47■■□□□ 1.35
GHDC-202ENST00000414034 IL27Q8NEV9 243 aa23.45■■□□□ 1.35
GHDC-202ENST00000414034 C11orf95C9JLR9 678 aaPredicted RBP23.44■■□□□ 1.34
GHDC-202ENST00000414034 NUDCQ9Y266 331 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 416.5 ms