RNA–Protein interactions for RNA: ENST00000414017.5

HLA-DMB-257, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-257ENST00000414017 NUP160Q12769 1436 aa17.17■□□□□ 0.34
HLA-DMB-257ENST00000414017 CLASP1Q7Z460 1538 aa17.15■□□□□ 0.34
HLA-DMB-257ENST00000414017 UBTFP17480 764 aaKnown RBP17.09■□□□□ 0.33
HLA-DMB-257ENST00000414017 KIF21BO75037 1637 aa17.09■□□□□ 0.33
HLA-DMB-257ENST00000414017 KIAA0586Q9BVV6 1533 aa17.08■□□□□ 0.32
HLA-DMB-257ENST00000414017 RANGAP1P46060 587 aaPredicted RBP17.07■□□□□ 0.32
HLA-DMB-257ENST00000414017 JPH4Q96JJ6 628 aa17.07■□□□□ 0.32
HLA-DMB-257ENST00000414017 GOLGA3Q08378 1498 aa17.05■□□□□ 0.32
HLA-DMB-257ENST00000414017 IQGAP2Q13576 1575 aa17.04■□□□□ 0.32
HLA-DMB-257ENST00000414017 ARHGEF11O15085 1522 aa17.04■□□□□ 0.32
HLA-DMB-257ENST00000414017 CTTNBP2Q8WZ74 1663 aa17.04■□□□□ 0.32
HLA-DMB-257ENST00000414017 PRG4Q92954 1404 aaPredicted RBP17.03■□□□□ 0.32
HLA-DMB-257ENST00000414017 TTBK1Q5TCY1 1321 aaPredicted RBP17.02■□□□□ 0.32
HLA-DMB-257ENST00000414017 RIMBP3CA6NJZ7 1639 aa17.02■□□□□ 0.31
HLA-DMB-257ENST00000414017 RIMBP3BA6NNM3 1639 aa17.02■□□□□ 0.31
HLA-DMB-257ENST00000414017 RIMBP3Q9UFD9 1639 aa17.02■□□□□ 0.31
HLA-DMB-257ENST00000414017 SHROOM2Q13796 1616 aa16.99■□□□□ 0.31
HLA-DMB-257ENST00000414017 ERCC6L2Q5T890 1561 aa16.99■□□□□ 0.31
HLA-DMB-257ENST00000414017 LOC105371045A0A1W2PR82 267 aa16.96■□□□□ 0.31
HLA-DMB-257ENST00000414017 CYB5RLQ6IPT4 315 aa16.95■□□□□ 0.3
HLA-DMB-257ENST00000414017 P3H3Q8IVL6 736 aa16.94■□□□□ 0.3
HLA-DMB-257ENST00000414017 CARMIL2Q6F5E8 1435 aa16.94■□□□□ 0.3
HLA-DMB-257ENST00000414017 ARAP1Q96P48 1450 aa16.93■□□□□ 0.3
HLA-DMB-257ENST00000414017 UGGT2Q9NYU1 1516 aa16.92■□□□□ 0.3
HLA-DMB-257ENST00000414017 DISP1Q96F81 1524 aa16.89■□□□□ 0.29
HLA-DMB-257ENST00000414017 KIAA0556O60303 1618 aa16.88■□□□□ 0.29
HLA-DMB-257ENST00000414017 TNIKQ9UKE5 1360 aa16.86■□□□□ 0.29
HLA-DMB-257ENST00000414017 PTPRGP23470 1445 aa16.85■□□□□ 0.29
HLA-DMB-257ENST00000414017 FHOD3Q2V2M9 1422 aa16.81■□□□□ 0.28
HLA-DMB-257ENST00000414017 SAMD9Q5K651 1589 aa16.81■□□□□ 0.28
HLA-DMB-257ENST00000414017 EFCAB5A4FU69 1503 aa16.78■□□□□ 0.28
HLA-DMB-257ENST00000414017 CLIP1P30622 1438 aa16.77■□□□□ 0.27
HLA-DMB-257ENST00000414017 ARHGAP35Q9NRY4 1499 aa16.76■□□□□ 0.27
HLA-DMB-257ENST00000414017 CEP162Q5TB80 1403 aa16.75■□□□□ 0.27
HLA-DMB-257ENST00000414017 ARID3CA6NKF2 412 aa16.73■□□□□ 0.27
HLA-DMB-257ENST00000414017 ATP1B4Q9UN42 357 aaPredicted RBP16.73■□□□□ 0.27
HLA-DMB-257ENST00000414017 UACAQ9BZF9 1416 aa16.72■□□□□ 0.27
HLA-DMB-257ENST00000414017 PLB1Q6P1J6 1458 aa16.72■□□□□ 0.27
HLA-DMB-257ENST00000414017 NPM1P06748 294 aaKnown RBP eCLIP16.71■□□□□ 0.27
HLA-DMB-257ENST00000414017 ADCY10Q96PN6 1610 aa16.7■□□□□ 0.26
HLA-DMB-257ENST00000414017 ABCC2Q92887 1545 aa16.67■□□□□ 0.26
HLA-DMB-257ENST00000414017 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.66■□□□□ 0.26
HLA-DMB-257ENST00000414017 HNRNPUL2Q1KMD3 747 aaKnown RBP16.66■□□□□ 0.26
HLA-DMB-257ENST00000414017 ABCA8O94911 1581 aa16.65■□□□□ 0.26
HLA-DMB-257ENST00000414017 FMN1Q68DA7 1419 aa16.65■□□□□ 0.26
HLA-DMB-257ENST00000414017 RAPGEF6Q8TEU7 1601 aa16.64■□□□□ 0.25
HLA-DMB-257ENST00000414017 UHRF1BP1LA0JNW5 1464 aa16.63■□□□□ 0.25
HLA-DMB-257ENST00000414017 TRHP20396 242 aaPredicted RBP16.6■□□□□ 0.25
HLA-DMB-257ENST00000414017 ZCCHC11Q5TAX3 1644 aaKnown RBP16.58■□□□□ 0.24
HLA-DMB-257ENST00000414017 PCF11O94913 1555 aaKnown RBP16.57■□□□□ 0.24
HLA-DMB-257ENST00000414017 NUP153P49790 1475 aaKnown RBP16.57■□□□□ 0.24
HLA-DMB-257ENST00000414017 KDM5BQ9UGL1 1544 aa16.56■□□□□ 0.24
HLA-DMB-257ENST00000414017 HECW1Q76N89 1606 aa16.56■□□□□ 0.24
HLA-DMB-257ENST00000414017 ATP10BO94823 1461 aa16.54■□□□□ 0.24
HLA-DMB-257ENST00000414017 FOXD1Q16676 465 aa16.54■□□□□ 0.24
HLA-DMB-257ENST00000414017 CDK13Q14004 1512 aaKnown RBP16.54■□□□□ 0.24
HLA-DMB-257ENST00000414017 ASXL2Q76L83 1435 aa16.53■□□□□ 0.24
HLA-DMB-257ENST00000414017 CASKIN1Q8WXD9 1431 aa16.53■□□□□ 0.24
HLA-DMB-257ENST00000414017 KCNH8Q96L42 1107 aa16.52■□□□□ 0.24
HLA-DMB-257ENST00000414017 FYCO1Q9BQS8 1478 aa16.51■□□□□ 0.23
HLA-DMB-257ENST00000414017 MAPKBP1O60336 1514 aa16.5■□□□□ 0.23
HLA-DMB-257ENST00000414017 EPRSP07814 1512 aaKnown RBP16.5■□□□□ 0.23
HLA-DMB-257ENST00000414017 VPS8Q8N3P4 1428 aa16.5■□□□□ 0.23
HLA-DMB-257ENST00000414017 PLEKHD1A6NEE1 506 aa16.48■□□□□ 0.23
HLA-DMB-257ENST00000414017 FAM69CQ0P6D2 419 aa16.48■□□□□ 0.23
HLA-DMB-257ENST00000414017 WDR7Q9Y4E6 1490 aa16.47■□□□□ 0.23
HLA-DMB-257ENST00000414017 CCDC18Q5T9S5 1454 aa16.46■□□□□ 0.23
HLA-DMB-257ENST00000414017 LRRIQ1Q96JM4 1722 aa16.45■□□□□ 0.22
HLA-DMB-257ENST00000414017 CDK11AQ9UQ88 783 aaPredicted RBP16.45■□□□□ 0.22
HLA-DMB-257ENST00000414017 ABCC10Q5T3U5 1492 aa16.43■□□□□ 0.22
HLA-DMB-257ENST00000414017 APLP2Q06481 763 aa16.43■□□□□ 0.22
HLA-DMB-257ENST00000414017 DIP2BQ9P265 1576 aa16.42■□□□□ 0.22
HLA-DMB-257ENST00000414017 KIF13AQ9H1H9 1805 aa16.38■□□□□ 0.21
HLA-DMB-257ENST00000414017 MTUS2Q5JR59 1369 aa16.37■□□□□ 0.21
HLA-DMB-257ENST00000414017 TROQ12816 1431 aaPredicted RBP16.36■□□□□ 0.21
HLA-DMB-257ENST00000414017 TSPOAP1O95153 1857 aa16.35■□□□□ 0.21
HLA-DMB-257ENST00000414017 MAGI3Q5TCQ9 1506 aa16.35■□□□□ 0.21
HLA-DMB-257ENST00000414017 TIAM1Q13009 1591 aa16.34■□□□□ 0.21
HLA-DMB-257ENST00000414017 CFAP43Q8NDM7 1665 aa16.34■□□□□ 0.21
HLA-DMB-257ENST00000414017 GLI2P10070 1586 aa16.33■□□□□ 0.2
HLA-DMB-257ENST00000414017 KIF14Q15058 1648 aa16.32■□□□□ 0.2
HLA-DMB-257ENST00000414017 CD109Q6YHK3 1445 aa16.32■□□□□ 0.2
HLA-DMB-257ENST00000414017 KANK4Q5T7N3 995 aaPredicted RBP16.3■□□□□ 0.2
HLA-DMB-257ENST00000414017 PPARGC1BQ86YN6 1023 aaKnown RBP16.3■□□□□ 0.2
HLA-DMB-257ENST00000414017 EHBP1L1Q8N3D4 1523 aa16.29■□□□□ 0.2
HLA-DMB-257ENST00000414017 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.29■□□□□ 0.2
HLA-DMB-257ENST00000414017 TTC37Q6PGP7 1564 aa16.29■□□□□ 0.2
HLA-DMB-257ENST00000414017 ABCA9Q8IUA7 1624 aa16.28■□□□□ 0.2
HLA-DMB-257ENST00000414017 MAP3K4Q9Y6R4 1608 aa16.28■□□□□ 0.2
HLA-DMB-257ENST00000414017 LRRC9Q6ZRR7 1453 aa16.28■□□□□ 0.2
HLA-DMB-257ENST00000414017 MAP3K1Q13233 1512 aa16.25■□□□□ 0.19
HLA-DMB-257ENST00000414017 CCNB3Q8WWL7 1395 aa16.23■□□□□ 0.19
HLA-DMB-257ENST00000414017 TEX14Q8IWB6 1497 aa16.22■□□□□ 0.19
HLA-DMB-257ENST00000414017 SUPT6HQ7KZ85 1726 aaKnown RBP16.22■□□□□ 0.19
HLA-DMB-257ENST00000414017 PPRC1Q5VV67 1664 aaKnown RBP16.22■□□□□ 0.19
HLA-DMB-257ENST00000414017 ZNF777Q9ULD5 760 aaPredicted RBP16.22■□□□□ 0.19
HLA-DMB-257ENST00000414017 NCOA2Q15596 1464 aa16.22■□□□□ 0.19
HLA-DMB-257ENST00000414017 MYO5CQ9NQX4 1742 aa16.21■□□□□ 0.19
HLA-DMB-257ENST00000414017 ARHGAP5Q13017 1502 aa16.2■□□□□ 0.18
HLA-DMB-257ENST00000414017 PLCH2O75038 1416 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms