RNA–Protein interactions for RNA: ENST00000413945.5

LINC00472-201, long intergenic non-protein coding RNA 472, humanhuman

TSL 3

Gene LINC00472, Length 662 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00472-201ENST00000413945 PITPNM1O00562 1244 aa12.12□□□□□ -0.47
LINC00472-201ENST00000413945 CEP164Q9UPV0 1460 aa12.12□□□□□ -0.47
LINC00472-201ENST00000413945 SMARCA4P51532 1647 aa12.11□□□□□ -0.47
LINC00472-201ENST00000413945 CHD1O14646 1710 aa12.08□□□□□ -0.48
LINC00472-201ENST00000413945 ZNF608Q9ULD9 1512 aaPredicted RBP12.06□□□□□ -0.48
LINC00472-201ENST00000413945 DISP3Q9P2K9 1392 aa12.05□□□□□ -0.48
LINC00472-201ENST00000413945 KCNA4P22459 653 aa12.05□□□□□ -0.48
LINC00472-201ENST00000413945 URB2Q14146 1524 aaKnown RBP12.02□□□□□ -0.48
LINC00472-201ENST00000413945 SYNJ2O15056 1496 aa12.01□□□□□ -0.49
LINC00472-201ENST00000413945 PEG3Q9GZU2 1588 aa12.01□□□□□ -0.49
LINC00472-201ENST00000413945 KIF13AQ9H1H9 1805 aa12□□□□□ -0.49
LINC00472-201ENST00000413945 LHX8Q68G74 356 aa11.99□□□□□ -0.49
LINC00472-201ENST00000413945 FANCD2Q9BXW9 1451 aa11.99□□□□□ -0.49
LINC00472-201ENST00000413945 CLASP1Q7Z460 1538 aa11.98□□□□□ -0.49
LINC00472-201ENST00000413945 MYCNP04198 464 aaPredicted RBP11.96□□□□□ -0.49
LINC00472-201ENST00000413945 EIF4G3O43432 1585 aaKnown RBP11.94□□□□□ -0.5
LINC00472-201ENST00000413945 IFT140Q96RY7 1462 aa11.94□□□□□ -0.5
LINC00472-201ENST00000413945 ADGRL1O94910 1474 aa11.92□□□□□ -0.5
LINC00472-201ENST00000413945 ATF5Q9Y2D1 282 aaPredicted RBP11.91□□□□□ -0.5
LINC00472-201ENST00000413945 ZBTB12Q9Y330 459 aaPredicted RBP11.9□□□□□ -0.5
LINC00472-201ENST00000413945 GAPVD1Q14C86 1478 aa11.89□□□□□ -0.51
LINC00472-201ENST00000413945 SPATA31D1Q6ZQQ2 1576 aa11.88□□□□□ -0.51
LINC00472-201ENST00000413945 PLSCR2Q9NRY7 297 aa11.87□□□□□ -0.51
LINC00472-201ENST00000413945 KDM6BO15054 1643 aa11.86□□□□□ -0.51
LINC00472-201ENST00000413945 GABBR2O75899 941 aa11.85□□□□□ -0.51
LINC00472-201ENST00000413945 C19orf67A6NJJ6 358 aa11.83□□□□□ -0.52
LINC00472-201ENST00000413945 FBLN2P98095 1184 aa11.79□□□□□ -0.52
LINC00472-201ENST00000413945 CFTRP13569 1480 aa11.76□□□□□ -0.53
LINC00472-201ENST00000413945 SYNJ1O43426 1573 aa11.76□□□□□ -0.53
LINC00472-201ENST00000413945 PRKAR2AP13861 404 aaKnown RBP11.76□□□□□ -0.53
LINC00472-201ENST00000413945 AQRO60306 1485 aaKnown RBP eCLIP11.75□□□□□ -0.53
LINC00472-201ENST00000413945 ABCC10Q5T3U5 1492 aa11.73□□□□□ -0.53
LINC00472-201ENST00000413945 TARBP1Q13395 1621 aaKnown RBP11.68□□□□□ -0.54
LINC00472-201ENST00000413945 POTEIP0CG38 1075 aa11.68□□□□□ -0.54
LINC00472-201ENST00000413945 DIP2BQ9P265 1576 aa11.67□□□□□ -0.54
LINC00472-201ENST00000413945 FAM69CQ0P6D2 419 aa11.66□□□□□ -0.54
LINC00472-201ENST00000413945 TOPBP1Q92547 1522 aa11.64□□□□□ -0.55
LINC00472-201ENST00000413945 MROH2BQ7Z745 1585 aa11.62□□□□□ -0.55
LINC00472-201ENST00000413945 SNAPC4Q5SXM2 1469 aa11.6□□□□□ -0.55
LINC00472-201ENST00000413945 CERKQ8TCT0 537 aa11.6□□□□□ -0.55
LINC00472-201ENST00000413945 MAPKBP1O60336 1514 aa11.6□□□□□ -0.55
LINC00472-201ENST00000413945 CLEC11AQ9Y240 323 aa11.56□□□□□ -0.56
LINC00472-201ENST00000413945 TOP2BQ02880 1626 aa11.56□□□□□ -0.56
LINC00472-201ENST00000413945 MAGI1Q96QZ7 1491 aaPredicted RBP11.55□□□□□ -0.56
LINC00472-201ENST00000413945 SPDYE2BA6NHP3 402 aa11.54□□□□□ -0.56
LINC00472-201ENST00000413945 SPDYE6P0CI01 402 aa11.54□□□□□ -0.56
LINC00472-201ENST00000413945 SPDYE2Q495Y8 402 aa11.54□□□□□ -0.56
LINC00472-201ENST00000413945 CHMP7Q8WUX9 453 aaPredicted RBP11.54□□□□□ -0.56
LINC00472-201ENST00000413945 TSPOAP1O95153 1857 aa11.54□□□□□ -0.56
LINC00472-201ENST00000413945 PRDM2Q13029 1718 aa11.52□□□□□ -0.57
LINC00472-201ENST00000413945 CHADLQ6NUI6 762 aa11.51□□□□□ -0.57
LINC00472-201ENST00000413945 SPDYE1Q8NFV5 336 aaPredicted RBP11.51□□□□□ -0.57
LINC00472-201ENST00000413945 ABCC8Q09428 1581 aa11.5□□□□□ -0.57
LINC00472-201ENST00000413945 CEP170Q5SW79 1584 aa11.49□□□□□ -0.57
LINC00472-201ENST00000413945 DNMBPQ6XZF7 1577 aa11.48□□□□□ -0.57
LINC00472-201ENST00000413945 WDR97A6NE52 1622 aa11.47□□□□□ -0.57
LINC00472-201ENST00000413945 PCF11O94913 1555 aaKnown RBP11.46□□□□□ -0.57
LINC00472-201ENST00000413945 COL17A1Q9UMD9 1497 aaPredicted RBP11.46□□□□□ -0.57
LINC00472-201ENST00000413945 PPRC1Q5VV67 1664 aaKnown RBP11.46□□□□□ -0.58
LINC00472-201ENST00000413945 TDRD9Q8NDG6 1382 aaKnown RBP11.44□□□□□ -0.58
LINC00472-201ENST00000413945 SHROOM2Q13796 1616 aa11.44□□□□□ -0.58
LINC00472-201ENST00000413945 POLA1P09884 1462 aaPredicted RBP11.44□□□□□ -0.58
LINC00472-201ENST00000413945 FOXD4L1Q9NU39 408 aa11.42□□□□□ -0.58
LINC00472-201ENST00000413945 GRIN2BQ13224 1484 aa11.38□□□□□ -0.59
LINC00472-201ENST00000413945 RAD54L2Q9Y4B4 1467 aa11.38□□□□□ -0.59
LINC00472-201ENST00000413945 SSUH2Q9Y2M2 353 aa11.37□□□□□ -0.59
LINC00472-201ENST00000413945 OTUD5Q96G74 571 aa11.36□□□□□ -0.59
LINC00472-201ENST00000413945 PTPRMP28827 1452 aa11.36□□□□□ -0.59
LINC00472-201ENST00000413945 WIZO95785 1651 aa11.35□□□□□ -0.59
LINC00472-201ENST00000413945 ADCY10Q96PN6 1610 aa11.35□□□□□ -0.59
LINC00472-201ENST00000413945 POTEMA6NI47 508 aa11.34□□□□□ -0.59
LINC00472-201ENST00000413945 CD44P16070 742 aaKnown RBP11.33□□□□□ -0.6
LINC00472-201ENST00000413945 NUP160Q12769 1436 aa11.32□□□□□ -0.6
LINC00472-201ENST00000413945 NPM1P06748 294 aaKnown RBP eCLIP11.31□□□□□ -0.6
LINC00472-201ENST00000413945 SOGA1O94964 1423 aa11.3□□□□□ -0.6
LINC00472-201ENST00000413945 MKRN4PQ13434 485 aaPredicted RBP11.3□□□□□ -0.6
LINC00472-201ENST00000413945 GLI2P10070 1586 aa11.29□□□□□ -0.6
LINC00472-201ENST00000413945 POTEB2H3BUK9 544 aa11.29□□□□□ -0.6
LINC00472-201ENST00000413945 ADAMTSL3P82987 1691 aa11.29□□□□□ -0.6
LINC00472-201ENST00000413945 POTEGQ6S5H5 508 aa11.28□□□□□ -0.6
LINC00472-201ENST00000413945 ZNF692Q9BU19 519 aaPredicted RBP11.27□□□□□ -0.61
LINC00472-201ENST00000413945 MED1Q15648 1581 aaPredicted RBP11.26□□□□□ -0.61
LINC00472-201ENST00000413945 DCBLD2Q96PD2 775 aa11.26□□□□□ -0.61
LINC00472-201ENST00000413945 PBRM1Q86U86 1689 aa11.26□□□□□ -0.61
LINC00472-201ENST00000413945 GRIN2AQ12879 1464 aa11.25□□□□□ -0.61
LINC00472-201ENST00000413945 PRR29P0C7W0 189 aa11.24□□□□□ -0.61
LINC00472-201ENST00000413945 CLCN6P51797 869 aa11.24□□□□□ -0.61
LINC00472-201ENST00000413945 KIF21BO75037 1637 aa11.24□□□□□ -0.61
LINC00472-201ENST00000413945 HSPA2P54652 639 aa11.22□□□□□ -0.61
LINC00472-201ENST00000413945 PRG4Q92954 1404 aaPredicted RBP11.22□□□□□ -0.61
LINC00472-201ENST00000413945 FARP1Q9Y4F1 1045 aaPredicted RBP11.22□□□□□ -0.61
LINC00472-201ENST00000413945 IQSEC2Q5JU85 1478 aa11.19□□□□□ -0.62
LINC00472-201ENST00000413945 MAP3K4Q9Y6R4 1608 aa11.18□□□□□ -0.62
LINC00472-201ENST00000413945 SRCAPQ6ZRS2 3230 aa11.17□□□□□ -0.62
LINC00472-201ENST00000413945 TEX14Q8IWB6 1497 aa11.17□□□□□ -0.62
LINC00472-201ENST00000413945 FGD5Q6ZNL6 1462 aa11.15□□□□□ -0.62
LINC00472-201ENST00000413945 TOP2AP11388 1531 aaKnown RBP11.14□□□□□ -0.63
LINC00472-201ENST00000413945 ZBTB22O15209 634 aa11.14□□□□□ -0.63
LINC00472-201ENST00000413945 ZNF579Q8NAF0 562 aaKnown RBP11.14□□□□□ -0.63
LINC00472-201ENST00000413945 SLC4A1APQ9BWU0 796 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms