RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-206ENST00000413725 CTTNBP2Q8WZ74 1663 aa21.72■■□□□ 1.07
SF1-206ENST00000413725 KIAA0586Q9BVV6 1533 aa21.64■■□□□ 1.05
SF1-206ENST00000413725 SHROOM2Q13796 1616 aa21.62■■□□□ 1.05
SF1-206ENST00000413725 IQGAP2Q13576 1575 aa21.62■■□□□ 1.05
SF1-206ENST00000413725 GOLGA3Q08378 1498 aa21.6■■□□□ 1.05
SF1-206ENST00000413725 RIMBP3CA6NJZ7 1639 aa21.54■■□□□ 1.04
SF1-206ENST00000413725 RIMBP3BA6NNM3 1639 aa21.54■■□□□ 1.04
SF1-206ENST00000413725 RIMBP3Q9UFD9 1639 aa21.54■■□□□ 1.04
SF1-206ENST00000413725 ARHGEF11O15085 1522 aa21.54■■□□□ 1.04
SF1-206ENST00000413725 JPH4Q96JJ6 628 aa21.52■■□□□ 1.04
SF1-206ENST00000413725 EHMT2Q96KQ7 1210 aa21.5■■□□□ 1.03
SF1-206ENST00000413725 UBTFP17480 764 aaKnown RBP21.49■■□□□ 1.03
SF1-206ENST00000413725 UGGT2Q9NYU1 1516 aa21.48■■□□□ 1.03
SF1-206ENST00000413725 PRG4Q92954 1404 aaPredicted RBP21.47■■□□□ 1.03
SF1-206ENST00000413725 ERCC6L2Q5T890 1561 aa21.44■■□□□ 1.02
SF1-206ENST00000413725 CARMIL2Q6F5E8 1435 aa21.43■■□□□ 1.02
SF1-206ENST00000413725 KIAA0556O60303 1618 aa21.4■■□□□ 1.02
SF1-206ENST00000413725 DISP1Q96F81 1524 aa21.38■■□□□ 1.01
SF1-206ENST00000413725 ARAP1Q96P48 1450 aa21.37■■□□□ 1.01
SF1-206ENST00000413725 SAMD9Q5K651 1589 aa21.36■■□□□ 1.01
SF1-206ENST00000413725 TNIKQ9UKE5 1360 aa21.35■■□□□ 1.01
SF1-206ENST00000413725 EFCAB5A4FU69 1503 aa21.34■■□□□ 1.01
SF1-206ENST00000413725 RANGAP1P46060 587 aaPredicted RBP21.31■■□□□ 1
SF1-206ENST00000413725 LOC105371045A0A1W2PR82 267 aa21.28■■□□□ 1
SF1-206ENST00000413725 CYB5RLQ6IPT4 315 aa21.27■■□□□ 1
SF1-206ENST00000413725 PTPRGP23470 1445 aa21.26■□□□□ 0.99
SF1-206ENST00000413725 P3H3Q8IVL6 736 aa21.22■□□□□ 0.99
SF1-206ENST00000413725 TTBK1Q5TCY1 1321 aaPredicted RBP21.22■□□□□ 0.99
SF1-206ENST00000413725 ARHGAP35Q9NRY4 1499 aa21.21■□□□□ 0.99
SF1-206ENST00000413725 CLIP1P30622 1438 aa21.2■□□□□ 0.98
SF1-206ENST00000413725 FHOD3Q2V2M9 1422 aa21.2■□□□□ 0.98
SF1-206ENST00000413725 CEP162Q5TB80 1403 aa21.18■□□□□ 0.98
SF1-206ENST00000413725 ADCY10Q96PN6 1610 aa21.16■□□□□ 0.98
SF1-206ENST00000413725 UACAQ9BZF9 1416 aa21.13■□□□□ 0.97
SF1-206ENST00000413725 ABCA8O94911 1581 aa21.13■□□□□ 0.97
SF1-206ENST00000413725 RAPGEF6Q8TEU7 1601 aa21.12■□□□□ 0.97
SF1-206ENST00000413725 ABCC2Q92887 1545 aa21.12■□□□□ 0.97
SF1-206ENST00000413725 UHRF1BP1LA0JNW5 1464 aa21.11■□□□□ 0.97
SF1-206ENST00000413725 FMN1Q68DA7 1419 aa21.11■□□□□ 0.97
SF1-206ENST00000413725 PLB1Q6P1J6 1458 aa21.1■□□□□ 0.97
SF1-206ENST00000413725 NPM1P06748 294 aaKnown RBP eCLIP21.03■□□□□ 0.96
SF1-206ENST00000413725 ZCCHC11Q5TAX3 1644 aaKnown RBP21.03■□□□□ 0.96
SF1-206ENST00000413725 HECW1Q76N89 1606 aa21.02■□□□□ 0.96
SF1-206ENST00000413725 KDM5BQ9UGL1 1544 aa21■□□□□ 0.95
SF1-206ENST00000413725 PCF11O94913 1555 aaKnown RBP21■□□□□ 0.95
SF1-206ENST00000413725 NUP153P49790 1475 aaKnown RBP20.97■□□□□ 0.95
SF1-206ENST00000413725 MAPKBP1O60336 1514 aa20.96■□□□□ 0.95
SF1-206ENST00000413725 CASKIN1Q8WXD9 1431 aa20.95■□□□□ 0.95
SF1-206ENST00000413725 FYCO1Q9BQS8 1478 aa20.95■□□□□ 0.94
SF1-206ENST00000413725 LRRIQ1Q96JM4 1722 aa20.95■□□□□ 0.94
SF1-206ENST00000413725 ATP1B4Q9UN42 357 aaPredicted RBP20.92■□□□□ 0.94
SF1-206ENST00000413725 ATP10BO94823 1461 aa20.92■□□□□ 0.94
SF1-206ENST00000413725 VPS8Q8N3P4 1428 aa20.91■□□□□ 0.94
SF1-206ENST00000413725 EPRSP07814 1512 aaKnown RBP20.89■□□□□ 0.94
SF1-206ENST00000413725 ARID3CA6NKF2 412 aa20.89■□□□□ 0.93
SF1-206ENST00000413725 CCDC18Q5T9S5 1454 aa20.88■□□□□ 0.93
SF1-206ENST00000413725 ASXL2Q76L83 1435 aa20.87■□□□□ 0.93
SF1-206ENST00000413725 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.87■□□□□ 0.93
SF1-206ENST00000413725 HNRNPUL2Q1KMD3 747 aaKnown RBP20.87■□□□□ 0.93
SF1-206ENST00000413725 CDK13Q14004 1512 aaKnown RBP20.87■□□□□ 0.93
SF1-206ENST00000413725 KIF13AQ9H1H9 1805 aa20.85■□□□□ 0.93
SF1-206ENST00000413725 WDR7Q9Y4E6 1490 aa20.83■□□□□ 0.93
SF1-206ENST00000413725 DIP2BQ9P265 1576 aa20.81■□□□□ 0.92
SF1-206ENST00000413725 CFAP43Q8NDM7 1665 aa20.81■□□□□ 0.92
SF1-206ENST00000413725 ABCC10Q5T3U5 1492 aa20.79■□□□□ 0.92
SF1-206ENST00000413725 CDK11AQ9UQ88 783 aaPredicted RBP20.78■□□□□ 0.92
SF1-206ENST00000413725 PLEKHD1A6NEE1 506 aa20.77■□□□□ 0.92
SF1-206ENST00000413725 TRHP20396 242 aaPredicted RBP20.76■□□□□ 0.91
SF1-206ENST00000413725 GLI2P10070 1586 aa20.75■□□□□ 0.91
SF1-206ENST00000413725 TIAM1Q13009 1591 aa20.74■□□□□ 0.91
SF1-206ENST00000413725 TSPOAP1O95153 1857 aa20.73■□□□□ 0.91
SF1-206ENST00000413725 MAP3K1Q13233 1512 aa20.72■□□□□ 0.91
SF1-206ENST00000413725 KIF14Q15058 1648 aa20.71■□□□□ 0.91
SF1-206ENST00000413725 TROQ12816 1431 aaPredicted RBP20.71■□□□□ 0.91
SF1-206ENST00000413725 FAM69CQ0P6D2 419 aa20.71■□□□□ 0.91
SF1-206ENST00000413725 KCNH8Q96L42 1107 aa20.71■□□□□ 0.91
SF1-206ENST00000413725 ABCA9Q8IUA7 1624 aa20.69■□□□□ 0.9
SF1-206ENST00000413725 MAP3K4Q9Y6R4 1608 aa20.69■□□□□ 0.9
SF1-206ENST00000413725 APLP2Q06481 763 aa20.69■□□□□ 0.9
SF1-206ENST00000413725 MAGI3Q5TCQ9 1506 aa20.68■□□□□ 0.9
SF1-206ENST00000413725 EHBP1L1Q8N3D4 1523 aa20.68■□□□□ 0.9
SF1-206ENST00000413725 MTUS2Q5JR59 1369 aa20.66■□□□□ 0.9
SF1-206ENST00000413725 MYO5CQ9NQX4 1742 aa20.64■□□□□ 0.89
SF1-206ENST00000413725 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.63■□□□□ 0.892e-6■□□□□ 11.2
SF1-206ENST00000413725 SUPT6HQ7KZ85 1726 aaKnown RBP20.63■□□□□ 0.89
SF1-206ENST00000413725 TTC37Q6PGP7 1564 aa20.63■□□□□ 0.89
SF1-206ENST00000413725 PPRC1Q5VV67 1664 aaKnown RBP20.61■□□□□ 0.89
SF1-206ENST00000413725 LRRC9Q6ZRR7 1453 aa20.61■□□□□ 0.89
SF1-206ENST00000413725 CD109Q6YHK3 1445 aa20.6■□□□□ 0.89
SF1-206ENST00000413725 CDC42BPAQ5VT25 1732 aa20.57■□□□□ 0.88
SF1-206ENST00000413725 TEX14Q8IWB6 1497 aa20.56■□□□□ 0.88
SF1-206ENST00000413725 ITSN2Q9NZM3 1697 aa20.54■□□□□ 0.88
SF1-206ENST00000413725 PREX2Q70Z35 1606 aa20.54■□□□□ 0.88
SF1-206ENST00000413725 CFAP74Q9C0B2 1584 aa20.54■□□□□ 0.88
SF1-206ENST00000413725 CDC42BPBQ9Y5S2 1711 aa20.53■□□□□ 0.88
SF1-206ENST00000413725 KANK4Q5T7N3 995 aaPredicted RBP20.52■□□□□ 0.88
SF1-206ENST00000413725 ARAP3Q8WWN8 1544 aa20.52■□□□□ 0.87
SF1-206ENST00000413725 NCOA2Q15596 1464 aa20.51■□□□□ 0.87
SF1-206ENST00000413725 PLCH2O75038 1416 aa20.49■□□□□ 0.87
SF1-206ENST00000413725 ARHGAP5Q13017 1502 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms