RNA–Protein interactions for RNA: ENST00000413509.6

HDAC9-207, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-207ENST00000413509 SYNJ2O15056 1496 aa13.13□□□□□ -0.31
HDAC9-207ENST00000413509 ARHGAP35Q9NRY4 1499 aa13.13□□□□□ -0.31
HDAC9-207ENST00000413509 GRIN2AQ12879 1464 aa13.11□□□□□ -0.31
HDAC9-207ENST00000413509 EFCAB5A4FU69 1503 aa13.11□□□□□ -0.31
HDAC9-207ENST00000413509 VPS8Q8N3P4 1428 aa13.11□□□□□ -0.31
HDAC9-207ENST00000413509 SAMD9Q5K651 1589 aa13.09□□□□□ -0.31
HDAC9-207ENST00000413509 IQGAP2Q13576 1575 aa13.07□□□□□ -0.32
HDAC9-207ENST00000413509 NUP160Q12769 1436 aa13.06□□□□□ -0.32
HDAC9-207ENST00000413509 KIAA0586Q9BVV6 1533 aa13.05□□□□□ -0.32
HDAC9-207ENST00000413509 UGGT2Q9NYU1 1516 aa13.04□□□□□ -0.32
HDAC9-207ENST00000413509 CEP170Q5SW79 1584 aa13.04□□□□□ -0.32
HDAC9-207ENST00000413509 CHD1O14646 1710 aa12.99□□□□□ -0.33
HDAC9-207ENST00000413509 CHMP7Q8WUX9 453 aaPredicted RBP12.98□□□□□ -0.33
HDAC9-207ENST00000413509 MAP3K1Q13233 1512 aa12.97□□□□□ -0.33
HDAC9-207ENST00000413509 FHOD3Q2V2M9 1422 aa12.96□□□□□ -0.33
HDAC9-207ENST00000413509 DISP1Q96F81 1524 aa12.96□□□□□ -0.33
HDAC9-207ENST00000413509 RANGAP1P46060 587 aaPredicted RBP12.95□□□□□ -0.34
HDAC9-207ENST00000413509 KIAA0556O60303 1618 aa12.95□□□□□ -0.34
HDAC9-207ENST00000413509 PCF11O94913 1555 aaKnown RBP12.94□□□□□ -0.34
HDAC9-207ENST00000413509 FYCO1Q9BQS8 1478 aa12.94□□□□□ -0.34
HDAC9-207ENST00000413509 FMN1Q68DA7 1419 aa12.94□□□□□ -0.34
HDAC9-207ENST00000413509 CASKIN1Q8WXD9 1431 aa12.94□□□□□ -0.34
HDAC9-207ENST00000413509 SHROOM2Q13796 1616 aa12.92□□□□□ -0.34
HDAC9-207ENST00000413509 CFAP43Q8NDM7 1665 aa12.91□□□□□ -0.34
HDAC9-207ENST00000413509 CLASP1Q7Z460 1538 aa12.9□□□□□ -0.34
HDAC9-207ENST00000413509 TIAM1Q13009 1591 aa12.9□□□□□ -0.35
HDAC9-207ENST00000413509 TRIM26Q12899 539 aaPredicted RBP12.89□□□□□ -0.35
HDAC9-207ENST00000413509 FBLN2P98095 1184 aa12.87□□□□□ -0.35
HDAC9-207ENST00000413509 P3H3Q8IVL6 736 aa12.86□□□□□ -0.35
HDAC9-207ENST00000413509 LRRIQ1Q96JM4 1722 aa12.85□□□□□ -0.35
HDAC9-207ENST00000413509 JPH4Q96JJ6 628 aa12.85□□□□□ -0.35
HDAC9-207ENST00000413509 CARMIL2Q6F5E8 1435 aa12.84□□□□□ -0.35
HDAC9-207ENST00000413509 HECW1Q76N89 1606 aa12.83□□□□□ -0.36
HDAC9-207ENST00000413509 LRRC9Q6ZRR7 1453 aa12.82□□□□□ -0.36
HDAC9-207ENST00000413509 CCDC18Q5T9S5 1454 aa12.81□□□□□ -0.36
HDAC9-207ENST00000413509 APLP2Q06481 763 aa12.81□□□□□ -0.36
HDAC9-207ENST00000413509 PPARGC1BQ86YN6 1023 aaKnown RBP12.8□□□□□ -0.36
HDAC9-207ENST00000413509 RAPGEF6Q8TEU7 1601 aa12.8□□□□□ -0.36
HDAC9-207ENST00000413509 PRG4Q92954 1404 aaPredicted RBP12.79□□□□□ -0.36
HDAC9-207ENST00000413509 KANK4Q5T7N3 995 aaPredicted RBP12.79□□□□□ -0.36
HDAC9-207ENST00000413509 ABCA8O94911 1581 aa12.78□□□□□ -0.36
HDAC9-207ENST00000413509 PCGF6Q9BYE7 350 aa12.78□□□□□ -0.36
HDAC9-207ENST00000413509 NUP153P49790 1475 aaKnown RBP12.78□□□□□ -0.36
HDAC9-207ENST00000413509 EPRSP07814 1512 aaKnown RBP12.78□□□□□ -0.36
HDAC9-207ENST00000413509 ERCC6L2Q5T890 1561 aa12.74□□□□□ -0.37
HDAC9-207ENST00000413509 EHBP1L1Q8N3D4 1523 aa12.74□□□□□ -0.37
HDAC9-207ENST00000413509 PLB1Q6P1J6 1458 aa12.73□□□□□ -0.37
HDAC9-207ENST00000413509 RRBP1Q9P2E9 1410 aaKnown RBP12.73□□□□□ -0.37
HDAC9-207ENST00000413509 ARHGEF11O15085 1522 aa12.72□□□□□ -0.37
HDAC9-207ENST00000413509 MAGI3Q5TCQ9 1506 aa12.72□□□□□ -0.37
HDAC9-207ENST00000413509 CDK13Q14004 1512 aaKnown RBP12.72□□□□□ -0.37
HDAC9-207ENST00000413509 PTPRGP23470 1445 aa12.71□□□□□ -0.38
HDAC9-207ENST00000413509 SUPT6HQ7KZ85 1726 aaKnown RBP12.68□□□□□ -0.38
HDAC9-207ENST00000413509 PHLDB1Q86UU1 1377 aa12.68□□□□□ -0.38
HDAC9-207ENST00000413509 TTBK1Q5TCY1 1321 aaPredicted RBP12.67□□□□□ -0.38
HDAC9-207ENST00000413509 UHRF1BP1LA0JNW5 1464 aa12.67□□□□□ -0.38
HDAC9-207ENST00000413509 MTUS2Q5JR59 1369 aa12.67□□□□□ -0.38
HDAC9-207ENST00000413509 ABCC2Q92887 1545 aa12.67□□□□□ -0.38
HDAC9-207ENST00000413509 UACAQ9BZF9 1416 aa12.66□□□□□ -0.38
HDAC9-207ENST00000413509 OSCARQ8IYS5 282 aa12.66□□□□□ -0.38
HDAC9-207ENST00000413509 ADCY10Q96PN6 1610 aa12.66□□□□□ -0.38
HDAC9-207ENST00000413509 NCOA2Q15596 1464 aa12.65□□□□□ -0.38
HDAC9-207ENST00000413509 ATP1B4Q9UN42 357 aaPredicted RBP12.65□□□□□ -0.38
HDAC9-207ENST00000413509 ATP10BO94823 1461 aa12.65□□□□□ -0.38
HDAC9-207ENST00000413509 CCNB3Q8WWL7 1395 aa12.64□□□□□ -0.39
HDAC9-207ENST00000413509 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.64□□□□□ -0.39
HDAC9-207ENST00000413509 TROQ12816 1431 aaPredicted RBP12.62□□□□□ -0.39
HDAC9-207ENST00000413509 MYOM3Q5VTT5 1437 aa12.62□□□□□ -0.39
HDAC9-207ENST00000413509 FGD6Q6ZV73 1430 aa12.61□□□□□ -0.39
HDAC9-207ENST00000413509 KDM5BQ9UGL1 1544 aa12.59□□□□□ -0.39
HDAC9-207ENST00000413509 TCOF1Q13428 1488 aaKnown RBP12.59□□□□□ -0.39
HDAC9-207ENST00000413509 CDK11AQ9UQ88 783 aaPredicted RBP12.58□□□□□ -0.4
HDAC9-207ENST00000413509 KIF14Q15058 1648 aa12.57□□□□□ -0.4
HDAC9-207ENST00000413509 MIA2Q96PC5 1412 aa12.56□□□□□ -0.4
HDAC9-207ENST00000413509 ZCCHC11Q5TAX3 1644 aaKnown RBP12.56□□□□□ -0.4
HDAC9-207ENST00000413509 ABCC10Q5T3U5 1492 aa12.56□□□□□ -0.4
HDAC9-207ENST00000413509 PTPN23Q9H3S7 1636 aa12.55□□□□□ -0.4
HDAC9-207ENST00000413509 ITSN2Q9NZM3 1697 aa12.54□□□□□ -0.4
HDAC9-207ENST00000413509 ARID3CA6NKF2 412 aa12.53□□□□□ -0.4
HDAC9-207ENST00000413509 GPATCH8Q9UKJ3 1502 aaKnown RBP12.52□□□□□ -0.41
HDAC9-207ENST00000413509 CDC42BPAQ5VT25 1732 aa12.51□□□□□ -0.41
HDAC9-207ENST00000413509 PLEKHD1A6NEE1 506 aa12.5□□□□□ -0.41
HDAC9-207ENST00000413509 PREX2Q70Z35 1606 aa12.48□□□□□ -0.41
HDAC9-207ENST00000413509 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.47□□□□□ -0.41
HDAC9-207ENST00000413509 HNRNPUL2Q1KMD3 747 aaKnown RBP12.47□□□□□ -0.41
HDAC9-207ENST00000413509 RIMBP3CA6NJZ7 1639 aa12.47□□□□□ -0.41
HDAC9-207ENST00000413509 RIMBP3BA6NNM3 1639 aa12.47□□□□□ -0.41
HDAC9-207ENST00000413509 RIMBP3Q9UFD9 1639 aa12.47□□□□□ -0.41
HDAC9-207ENST00000413509 TTC37Q6PGP7 1564 aa12.47□□□□□ -0.41
HDAC9-207ENST00000413509 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.47□□□□□ -0.41
HDAC9-207ENST00000413509 HRCP23327 699 aa12.46□□□□□ -0.41
HDAC9-207ENST00000413509 PTPRKQ15262 1439 aa12.45□□□□□ -0.42
HDAC9-207ENST00000413509 DNMT1P26358 1616 aaKnown RBP12.45□□□□□ -0.42
HDAC9-207ENST00000413509 WDR7Q9Y4E6 1490 aa12.45□□□□□ -0.42
HDAC9-207ENST00000413509 CDC42BPBQ9Y5S2 1711 aa12.45□□□□□ -0.42
HDAC9-207ENST00000413509 AKNAQ7Z591 1439 aa12.45□□□□□ -0.42
HDAC9-207ENST00000413509 FAM50AQ14320 339 aaKnown RBP12.44□□□□□ -0.42
HDAC9-207ENST00000413509 CAMSAP2Q08AD1 1489 aa12.44□□□□□ -0.42
HDAC9-207ENST00000413509 ARAP3Q8WWN8 1544 aa12.43□□□□□ -0.42
HDAC9-207ENST00000413509 MYO5CQ9NQX4 1742 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms