RNA–Protein interactions for RNA: ENST00000412913.1

SMARCAL1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-204ENST00000412913 IQGAP2Q13576 1575 aa17.27■□□□□ 0.35
SMARCAL1-204ENST00000412913 CLASP1Q7Z460 1538 aa17.26■□□□□ 0.35
SMARCAL1-204ENST00000412913 CHMP7Q8WUX9 453 aaPredicted RBP17.23■□□□□ 0.35
SMARCAL1-204ENST00000412913 KIAA0586Q9BVV6 1533 aa17.22■□□□□ 0.35
SMARCAL1-204ENST00000412913 SHROOM2Q13796 1616 aa17.22■□□□□ 0.35
SMARCAL1-204ENST00000412913 SAMD9Q5K651 1589 aa17.2■□□□□ 0.34
SMARCAL1-204ENST00000412913 UGGT2Q9NYU1 1516 aa17.18■□□□□ 0.34
SMARCAL1-204ENST00000412913 UBTFP17480 764 aaKnown RBP17.18■□□□□ 0.34
SMARCAL1-204ENST00000412913 FBLN2P98095 1184 aa17.18■□□□□ 0.34
SMARCAL1-204ENST00000412913 CEP162Q5TB80 1403 aa17.18■□□□□ 0.34
SMARCAL1-204ENST00000412913 EFCAB5A4FU69 1503 aa17.15■□□□□ 0.34
SMARCAL1-204ENST00000412913 KIAA0556O60303 1618 aa17.14■□□□□ 0.33
SMARCAL1-204ENST00000412913 ARHGAP35Q9NRY4 1499 aa17.13■□□□□ 0.33
SMARCAL1-204ENST00000412913 CLIP1P30622 1438 aa17.11■□□□□ 0.33
SMARCAL1-204ENST00000412913 DISP1Q96F81 1524 aa17.11■□□□□ 0.33
SMARCAL1-204ENST00000412913 ARAP1Q96P48 1450 aa17.09■□□□□ 0.33
SMARCAL1-204ENST00000412913 ERCC6L2Q5T890 1561 aa17.07■□□□□ 0.32
SMARCAL1-204ENST00000412913 FHOD3Q2V2M9 1422 aa17.02■□□□□ 0.31
SMARCAL1-204ENST00000412913 OSCARQ8IYS5 282 aa17■□□□□ 0.31
SMARCAL1-204ENST00000412913 PRG4Q92954 1404 aaPredicted RBP17■□□□□ 0.31
SMARCAL1-204ENST00000412913 RANGAP1P46060 587 aaPredicted RBP16.98■□□□□ 0.31
SMARCAL1-204ENST00000412913 JPH4Q96JJ6 628 aa16.98■□□□□ 0.31
SMARCAL1-204ENST00000412913 PCF11O94913 1555 aaKnown RBP16.98■□□□□ 0.31
SMARCAL1-204ENST00000412913 CARMIL2Q6F5E8 1435 aa16.95■□□□□ 0.3
SMARCAL1-204ENST00000412913 VPS8Q8N3P4 1428 aa16.95■□□□□ 0.3
SMARCAL1-204ENST00000412913 LRRIQ1Q96JM4 1722 aa16.94■□□□□ 0.3
SMARCAL1-204ENST00000412913 ARHGEF11O15085 1522 aa16.92■□□□□ 0.3
SMARCAL1-204ENST00000412913 RIMBP3CA6NJZ7 1639 aa16.92■□□□□ 0.3
SMARCAL1-204ENST00000412913 RIMBP3BA6NNM3 1639 aa16.92■□□□□ 0.3
SMARCAL1-204ENST00000412913 RIMBP3Q9UFD9 1639 aa16.92■□□□□ 0.3
SMARCAL1-204ENST00000412913 RAPGEF6Q8TEU7 1601 aa16.9■□□□□ 0.3
SMARCAL1-204ENST00000412913 ABCA8O94911 1581 aa16.89■□□□□ 0.3
SMARCAL1-204ENST00000412913 FMN1Q68DA7 1419 aa16.89■□□□□ 0.29
SMARCAL1-204ENST00000412913 P3H3Q8IVL6 736 aa16.89■□□□□ 0.29
SMARCAL1-204ENST00000412913 HECW1Q76N89 1606 aa16.88■□□□□ 0.29
SMARCAL1-204ENST00000412913 CFAP43Q8NDM7 1665 aa16.88■□□□□ 0.29
SMARCAL1-204ENST00000412913 FYCO1Q9BQS8 1478 aa16.87■□□□□ 0.29
SMARCAL1-204ENST00000412913 CASKIN1Q8WXD9 1431 aa16.85■□□□□ 0.29
SMARCAL1-204ENST00000412913 PLB1Q6P1J6 1458 aa16.84■□□□□ 0.29
SMARCAL1-204ENST00000412913 ADCY10Q96PN6 1610 aa16.81■□□□□ 0.28
SMARCAL1-204ENST00000412913 NUP153P49790 1475 aaKnown RBP16.81■□□□□ 0.28
SMARCAL1-204ENST00000412913 PTPRGP23470 1445 aa16.81■□□□□ 0.28
SMARCAL1-204ENST00000412913 ABCC2Q92887 1545 aa16.8■□□□□ 0.28
SMARCAL1-204ENST00000412913 TIAM1Q13009 1591 aa16.79■□□□□ 0.28
SMARCAL1-204ENST00000412913 UHRF1BP1LA0JNW5 1464 aa16.77■□□□□ 0.28
SMARCAL1-204ENST00000412913 UACAQ9BZF9 1416 aa16.76■□□□□ 0.27
SMARCAL1-204ENST00000412913 EPRSP07814 1512 aaKnown RBP16.75■□□□□ 0.27
SMARCAL1-204ENST00000412913 MAP3K1Q13233 1512 aa16.75■□□□□ 0.27
SMARCAL1-204ENST00000412913 CDK13Q14004 1512 aaKnown RBP16.75■□□□□ 0.27
SMARCAL1-204ENST00000412913 CCDC18Q5T9S5 1454 aa16.74■□□□□ 0.27
SMARCAL1-204ENST00000412913 ZCCHC11Q5TAX3 1644 aaKnown RBP16.74■□□□□ 0.27
SMARCAL1-204ENST00000412913 TTBK1Q5TCY1 1321 aaPredicted RBP16.72■□□□□ 0.27
SMARCAL1-204ENST00000412913 MAGI3Q5TCQ9 1506 aa16.71■□□□□ 0.27
SMARCAL1-204ENST00000412913 KDM5BQ9UGL1 1544 aa16.7■□□□□ 0.26
SMARCAL1-204ENST00000412913 ATP10BO94823 1461 aa16.67■□□□□ 0.26
SMARCAL1-204ENST00000412913 EHBP1L1Q8N3D4 1523 aa16.66■□□□□ 0.26
SMARCAL1-204ENST00000412913 LRRC9Q6ZRR7 1453 aa16.65■□□□□ 0.26
SMARCAL1-204ENST00000412913 KIF14Q15058 1648 aa16.6■□□□□ 0.25
SMARCAL1-204ENST00000412913 SUPT6HQ7KZ85 1726 aaKnown RBP16.59■□□□□ 0.25
SMARCAL1-204ENST00000412913 ARID3CA6NKF2 412 aa16.58■□□□□ 0.24
SMARCAL1-204ENST00000412913 ATP1B4Q9UN42 357 aaPredicted RBP16.58■□□□□ 0.24
SMARCAL1-204ENST00000412913 MAPKBP1O60336 1514 aa16.57■□□□□ 0.24
SMARCAL1-204ENST00000412913 KANK4Q5T7N3 995 aaPredicted RBP16.57■□□□□ 0.24
SMARCAL1-204ENST00000412913 DNAJC5Q9H3Z4 198 aa16.57■□□□□ 0.24
SMARCAL1-204ENST00000412913 TROQ12816 1431 aaPredicted RBP16.56■□□□□ 0.24
SMARCAL1-204ENST00000412913 CYB5RLQ6IPT4 315 aa16.54■□□□□ 0.24
SMARCAL1-204ENST00000412913 WDR7Q9Y4E6 1490 aa16.53■□□□□ 0.24
SMARCAL1-204ENST00000412913 MTUS2Q5JR59 1369 aa16.52■□□□□ 0.24
SMARCAL1-204ENST00000412913 TTC37Q6PGP7 1564 aa16.51■□□□□ 0.23
SMARCAL1-204ENST00000412913 NCOA2Q15596 1464 aa16.51■□□□□ 0.23
SMARCAL1-204ENST00000412913 APLP2Q06481 763 aa16.51■□□□□ 0.23
SMARCAL1-204ENST00000412913 ASXL2Q76L83 1435 aa16.51■□□□□ 0.23
SMARCAL1-204ENST00000412913 CDC42BPAQ5VT25 1732 aa16.5■□□□□ 0.23
SMARCAL1-204ENST00000412913 ABCC10Q5T3U5 1492 aa16.5■□□□□ 0.23
SMARCAL1-204ENST00000412913 PPARGC1BQ86YN6 1023 aaKnown RBP16.49■□□□□ 0.23
SMARCAL1-204ENST00000412913 ITSN2Q9NZM3 1697 aa16.49■□□□□ 0.23
SMARCAL1-204ENST00000412913 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.49■□□□□ 0.23
SMARCAL1-204ENST00000412913 ABCA9Q8IUA7 1624 aa16.48■□□□□ 0.23
SMARCAL1-204ENST00000412913 PREX2Q70Z35 1606 aa16.47■□□□□ 0.23
SMARCAL1-204ENST00000412913 MYO5CQ9NQX4 1742 aa16.47■□□□□ 0.23
SMARCAL1-204ENST00000412913 PHLDB1Q86UU1 1377 aa16.46■□□□□ 0.23
SMARCAL1-204ENST00000412913 DIP2BQ9P265 1576 aa16.46■□□□□ 0.23
SMARCAL1-204ENST00000412913 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.45■□□□□ 0.22
SMARCAL1-204ENST00000412913 HNRNPUL2Q1KMD3 747 aaKnown RBP16.45■□□□□ 0.22
SMARCAL1-204ENST00000412913 KIF13AQ9H1H9 1805 aa16.45■□□□□ 0.22
SMARCAL1-204ENST00000412913 CDC42BPBQ9Y5S2 1711 aa16.45■□□□□ 0.22
SMARCAL1-204ENST00000412913 CDK11AQ9UQ88 783 aaPredicted RBP16.44■□□□□ 0.22
SMARCAL1-204ENST00000412913 MAP3K4Q9Y6R4 1608 aa16.42■□□□□ 0.22
SMARCAL1-204ENST00000412913 PLEKHD1A6NEE1 506 aa16.42■□□□□ 0.22
SMARCAL1-204ENST00000412913 GLI2P10070 1586 aa16.42■□□□□ 0.22
SMARCAL1-204ENST00000412913 MYOM3Q5VTT5 1437 aa16.41■□□□□ 0.22
SMARCAL1-204ENST00000412913 GPATCH8Q9UKJ3 1502 aaKnown RBP16.4■□□□□ 0.22
SMARCAL1-204ENST00000412913 RRBP1Q9P2E9 1410 aaKnown RBP16.39■□□□□ 0.21
SMARCAL1-204ENST00000412913 NPM1P06748 294 aaKnown RBP eCLIP16.39■□□□□ 0.21
SMARCAL1-204ENST00000412913 ARAP3Q8WWN8 1544 aa16.38■□□□□ 0.21
SMARCAL1-204ENST00000412913 PTPN23Q9H3S7 1636 aa16.37■□□□□ 0.21
SMARCAL1-204ENST00000412913 FGD6Q6ZV73 1430 aa16.37■□□□□ 0.21
SMARCAL1-204ENST00000412913 PPRC1Q5VV67 1664 aaKnown RBP16.37■□□□□ 0.21
SMARCAL1-204ENST00000412913 TCOF1Q13428 1488 aaKnown RBP16.35■□□□□ 0.21
SMARCAL1-204ENST00000412913 SAMD9LQ8IVG5 1584 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms