RNA–Protein interactions for RNA: ENST00000412770.6

PPP6R1-201, Transcript of protein phosphatase 6 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP6R1, Length 3,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6R1-201ENST00000412770 KIF21AQ7Z4S6 1674 aa24.47■■□□□ 1.51
PPP6R1-201ENST00000412770 GRIN2BQ13224 1484 aa24.45■■□□□ 1.51
PPP6R1-201ENST00000412770 MTUS2Q5JR59 1369 aa24.45■■□□□ 1.5
PPP6R1-201ENST00000412770 CDK11AQ9UQ88 783 aaPredicted RBP24.44■■□□□ 1.5
PPP6R1-201ENST00000412770 FHAD1B1AJZ9 1412 aa24.44■■□□□ 1.5
PPP6R1-201ENST00000412770 FHOD3Q2V2M9 1422 aa24.44■■□□□ 1.5
PPP6R1-201ENST00000412770 KANK4Q5T7N3 995 aaPredicted RBP24.38■■□□□ 1.49
PPP6R1-201ENST00000412770 ZNF608Q9ULD9 1512 aaPredicted RBP24.36■■□□□ 1.49
PPP6R1-201ENST00000412770 JPH4Q96JJ6 628 aa24.31■■□□□ 1.48
PPP6R1-201ENST00000412770 SNAPC4Q5SXM2 1469 aa24.29■■□□□ 1.48
PPP6R1-201ENST00000412770 FMN1Q68DA7 1419 aa24.29■■□□□ 1.48
PPP6R1-201ENST00000412770 ZNF777Q9ULD5 760 aaPredicted RBP24.29■■□□□ 1.48
PPP6R1-201ENST00000412770 ARAP1Q96P48 1450 aa24.26■■□□□ 1.47
PPP6R1-201ENST00000412770 ARHGAP35Q9NRY4 1499 aa24.26■■□□□ 1.47
PPP6R1-201ENST00000412770 MYT1LQ9UL68 1186 aa24.24■■□□□ 1.47
PPP6R1-201ENST00000412770 CARMIL2Q6F5E8 1435 aa24.23■■□□□ 1.47
PPP6R1-201ENST00000412770 CUL7Q14999 1698 aa24.19■■□□□ 1.46
PPP6R1-201ENST00000412770 PLEKHD1A6NEE1 506 aa24.17■■□□□ 1.46
PPP6R1-201ENST00000412770 WDR62O43379 1518 aa24.16■■□□□ 1.46
PPP6R1-201ENST00000412770 TRIM52Q96A61 297 aa24.12■■□□□ 1.45
PPP6R1-201ENST00000412770 CHIC2Q9UKJ5 165 aa24.11■■□□□ 1.45
PPP6R1-201ENST00000412770 NPM1P06748 294 aaKnown RBP eCLIP24.1■■□□□ 1.45
PPP6R1-201ENST00000412770 KCNH8Q96L42 1107 aa24.1■■□□□ 1.45
PPP6R1-201ENST00000412770 CCNB3Q8WWL7 1395 aa24.07■■□□□ 1.44
PPP6R1-201ENST00000412770 MAGI1Q96QZ7 1491 aaPredicted RBP24.04■■□□□ 1.44
PPP6R1-201ENST00000412770 SYNJ2O15056 1496 aa24.03■■□□□ 1.44
PPP6R1-201ENST00000412770 GRIN2AQ12879 1464 aa24.03■■□□□ 1.44
PPP6R1-201ENST00000412770 EFCAB5A4FU69 1503 aa24■■□□□ 1.43
PPP6R1-201ENST00000412770 TARBP1Q13395 1621 aaKnown RBP24■■□□□ 1.43
PPP6R1-201ENST00000412770 KIAA0586Q9BVV6 1533 aa23.99■■□□□ 1.43
PPP6R1-201ENST00000412770 ABCA5Q8WWZ7 1642 aa23.99■■□□□ 1.43
PPP6R1-201ENST00000412770 CFDP1Q9UEE9 299 aaPredicted RBP23.98■■□□□ 1.43
PPP6R1-201ENST00000412770 NEUROD1Q13562 356 aa23.98■■□□□ 1.43
PPP6R1-201ENST00000412770 PTPRGP23470 1445 aa23.97■■□□□ 1.43
PPP6R1-201ENST00000412770 IQGAP2Q13576 1575 aa23.96■■□□□ 1.43
PPP6R1-201ENST00000412770 EIF4G3O43432 1585 aaKnown RBP23.95■■□□□ 1.43
PPP6R1-201ENST00000412770 CASKIN1Q8WXD9 1431 aa23.95■■□□□ 1.42
PPP6R1-201ENST00000412770 OSCARQ8IYS5 282 aa23.94■■□□□ 1.42
PPP6R1-201ENST00000412770 RRP7BPQ9NSQ0 103 aa23.93■■□□□ 1.42
PPP6R1-201ENST00000412770 ADAMTS12P58397 1594 aa23.9■■□□□ 1.42
PPP6R1-201ENST00000412770 PRG4Q92954 1404 aaPredicted RBP23.9■■□□□ 1.42
PPP6R1-201ENST00000412770 FYCO1Q9BQS8 1478 aa23.87■■□□□ 1.41
PPP6R1-201ENST00000412770 THOC2Q8NI27 1593 aaKnown RBP23.87■■□□□ 1.41
PPP6R1-201ENST00000412770 LRRC9Q6ZRR7 1453 aa23.86■■□□□ 1.41
PPP6R1-201ENST00000412770 TSPY4P0CV99 314 aa23.86■■□□□ 1.41
PPP6R1-201ENST00000412770 TSPY10P0CW01 314 aa23.86■■□□□ 1.41
PPP6R1-201ENST00000412770 PBRM1Q86U86 1689 aa23.85■■□□□ 1.41
PPP6R1-201ENST00000412770 CCDC18Q5T9S5 1454 aa23.79■■□□□ 1.4
PPP6R1-201ENST00000412770 PHLDB1Q86UU1 1377 aa23.79■■□□□ 1.4
PPP6R1-201ENST00000412770 PCF11O94913 1555 aaKnown RBP23.79■■□□□ 1.4
PPP6R1-201ENST00000412770 CTTNBP2Q8WZ74 1663 aa23.77■■□□□ 1.4
PPP6R1-201ENST00000412770 TIAM1Q13009 1591 aa23.76■■□□□ 1.39
PPP6R1-201ENST00000412770 WDR97A6NE52 1622 aa23.75■■□□□ 1.39
PPP6R1-201ENST00000412770 PLB1Q6P1J6 1458 aa23.67■■□□□ 1.38
PPP6R1-201ENST00000412770 CDK13Q14004 1512 aaKnown RBP23.67■■□□□ 1.38
PPP6R1-201ENST00000412770 NCOA2Q15596 1464 aa23.66■■□□□ 1.38
PPP6R1-201ENST00000412770 SETD5Q9C0A6 1442 aa23.65■■□□□ 1.38
PPP6R1-201ENST00000412770 EPRSP07814 1512 aaKnown RBP23.64■■□□□ 1.38
PPP6R1-201ENST00000412770 HECW1Q76N89 1606 aa23.64■■□□□ 1.37
PPP6R1-201ENST00000412770 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.64■■□□□ 1.371e-6■□□□□ 10.1
PPP6R1-201ENST00000412770 FGD6Q6ZV73 1430 aa23.63■■□□□ 1.37
PPP6R1-201ENST00000412770 CYB5RLQ6IPT4 315 aa23.63■■□□□ 1.37
PPP6R1-201ENST00000412770 RAB3GAP2Q9H2M9 1393 aa23.62■■□□□ 1.37
PPP6R1-201ENST00000412770 NUP160Q12769 1436 aa23.62■■□□□ 1.37
PPP6R1-201ENST00000412770 MYOM3Q5VTT5 1437 aa23.62■■□□□ 1.37
PPP6R1-201ENST00000412770 UGGT2Q9NYU1 1516 aa23.61■■□□□ 1.37
PPP6R1-201ENST00000412770 ZNF644Q9H582 1327 aaPredicted RBP23.59■■□□□ 1.37
PPP6R1-201ENST00000412770 RRBP1Q9P2E9 1410 aaKnown RBP23.58■■□□□ 1.37
PPP6R1-201ENST00000412770 SLC4A1APQ9BWU0 796 aaKnown RBP23.58■■□□□ 1.36
PPP6R1-201ENST00000412770 HNRNPMP52272 730 aaKnown RBP eCLIP23.56■■□□□ 1.366e-7■■■■□ 25.6
PPP6R1-201ENST00000412770 MAP3K1Q13233 1512 aa23.56■■□□□ 1.36
PPP6R1-201ENST00000412770 ZNF326Q5BKZ1 582 aaKnown RBP23.56■■□□□ 1.36
PPP6R1-201ENST00000412770 EHBP1L1Q8N3D4 1523 aa23.55■■□□□ 1.36
PPP6R1-201ENST00000412770 CEP170Q5SW79 1584 aa23.54■■□□□ 1.36
PPP6R1-201ENST00000412770 EFCAB2Q5VUJ9 269 aa23.54■■□□□ 1.36
PPP6R1-201ENST00000412770 TONSLQ96HA7 1378 aa23.54■■□□□ 1.36
PPP6R1-201ENST00000412770 UACAQ9BZF9 1416 aa23.52■■□□□ 1.36
PPP6R1-201ENST00000412770 DISP1Q96F81 1524 aa23.52■■□□□ 1.36
PPP6R1-201ENST00000412770 KIAA0556O60303 1618 aa23.52■■□□□ 1.36
PPP6R1-201ENST00000412770 TROQ12816 1431 aaPredicted RBP23.52■■□□□ 1.36
PPP6R1-201ENST00000412770 SIN3AQ96ST3 1273 aa23.51■■□□□ 1.35
PPP6R1-201ENST00000412770 ZNF316A6NFI3 1004 aaPredicted RBP23.49■■□□□ 1.35
PPP6R1-201ENST00000412770 DIEXFQ68CQ4 756 aaKnown RBP23.48■■□□□ 1.35
PPP6R1-201ENST00000412770 SAMD9Q5K651 1589 aa23.48■■□□□ 1.35
PPP6R1-201ENST00000412770 POLR3GLQ9BT43 218 aa23.44■■□□□ 1.34
PPP6R1-201ENST00000412770 CLSPNQ9HAW4 1339 aa23.44■■□□□ 1.34
PPP6R1-201ENST00000412770 NUP153P49790 1475 aaKnown RBP23.43■■□□□ 1.34
PPP6R1-201ENST00000412770 SUPT6HQ7KZ85 1726 aaKnown RBP23.43■■□□□ 1.34
PPP6R1-201ENST00000412770 RAPGEF6Q8TEU7 1601 aa23.41■■□□□ 1.34
PPP6R1-201ENST00000412770 ANKRD30AQ9BXX3 1397 aa23.4■■□□□ 1.34
PPP6R1-201ENST00000412770 DHX57Q6P158 1386 aaKnown RBP23.39■■□□□ 1.33
PPP6R1-201ENST00000412770 FOXD1Q16676 465 aa23.36■■□□□ 1.33
PPP6R1-201ENST00000412770 MIA2Q96PC5 1412 aa23.34■■□□□ 1.33
PPP6R1-201ENST00000412770 ACIN1Q9UKV3 1341 aaKnown RBP23.34■■□□□ 1.33
PPP6R1-201ENST00000412770 RSPH4AQ5TD94 716 aa23.34■■□□□ 1.33
PPP6R1-201ENST00000412770 ATP10BO94823 1461 aa23.34■■□□□ 1.33
PPP6R1-201ENST00000412770 CHD1O14646 1710 aa23.32■■□□□ 1.32
PPP6R1-201ENST00000412770 MPHOSPH9Q99550 1183 aa23.31■■□□□ 1.32
PPP6R1-201ENST00000412770 CFAP43Q8NDM7 1665 aa23.3■■□□□ 1.32
PPP6R1-201ENST00000412770 ARHGEF11O15085 1522 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms