RNA–Protein interactions for RNA: ENST00000412678.6

CDHR4-202, Transcript of cadherin related family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDHR4, Length 2,476 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-202ENST00000412678 NBR1Q14596 966 aa15.88■□□□□ 0.13
CDHR4-202ENST00000412678 RTL5Q5HYW3 569 aaPredicted RBP15.88■□□□□ 0.13
CDHR4-202ENST00000412678 KIF21BO75037 1637 aa15.87■□□□□ 0.13
CDHR4-202ENST00000412678 IRX6P78412 446 aaPredicted RBP15.87■□□□□ 0.13
CDHR4-202ENST00000412678 KANK4Q5T7N3 995 aaPredicted RBP15.87■□□□□ 0.13
CDHR4-202ENST00000412678 IL27Q8NEV9 243 aa15.85■□□□□ 0.13
CDHR4-202ENST00000412678 HIRIP3Q9BW71 556 aaPredicted RBP15.85■□□□□ 0.13
CDHR4-202ENST00000412678 RAPGEF2Q9Y4G8 1499 aa15.84■□□□□ 0.13
CDHR4-202ENST00000412678 PPP1R15AO75807 674 aaPredicted RBP15.82■□□□□ 0.12
CDHR4-202ENST00000412678 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.82■□□□□ 0.12
CDHR4-202ENST00000412678 PPP4R2Q9NY27 417 aa15.8■□□□□ 0.12
CDHR4-202ENST00000412678 ANP32CO43423 234 aa15.79■□□□□ 0.12
CDHR4-202ENST00000412678 CADPSQ9ULU8 1353 aa15.79■□□□□ 0.12
CDHR4-202ENST00000412678 EIF5BO60841 1220 aaKnown RBP15.78■□□□□ 0.12
CDHR4-202ENST00000412678 CFTRP13569 1480 aa15.78■□□□□ 0.12
CDHR4-202ENST00000412678 PAK3O75914 559 aaPredicted RBP15.77■□□□□ 0.11
CDHR4-202ENST00000412678 WDR97A6NE52 1622 aa15.77■□□□□ 0.11
CDHR4-202ENST00000412678 SIN3AQ96ST3 1273 aa15.75■□□□□ 0.11
CDHR4-202ENST00000412678 RTN4Q9NQC3 1192 aaKnown RBP15.75■□□□□ 0.11
CDHR4-202ENST00000412678 RRBP1Q9P2E9 1410 aaKnown RBP15.75■□□□□ 0.11
CDHR4-202ENST00000412678 C11orf95C9JLR9 678 aaPredicted RBP15.74■□□□□ 0.11
CDHR4-202ENST00000412678 PKNOX2Q96KN3 472 aa15.74■□□□□ 0.11
CDHR4-202ENST00000412678 SYNJ1O43426 1573 aa15.74■□□□□ 0.11
CDHR4-202ENST00000412678 MAPKBP1O60336 1514 aa15.74■□□□□ 0.11
CDHR4-202ENST00000412678 CUX2O14529 1486 aa15.73■□□□□ 0.11
CDHR4-202ENST00000412678 RAB3GAP2Q9H2M9 1393 aa15.73■□□□□ 0.11
CDHR4-202ENST00000412678 WASHC2AQ641Q2 1341 aa15.72■□□□□ 0.11
CDHR4-202ENST00000412678 CCNB3Q8WWL7 1395 aa15.71■□□□□ 0.11
CDHR4-202ENST00000412678 IPO9Q96P70 1041 aaKnown RBP15.71■□□□□ 0.1
CDHR4-202ENST00000412678 HNRNPUQ00839 825 aaKnown RBP eCLIP15.7■□□□□ 0.1
CDHR4-202ENST00000412678 ANP32AP39687 249 aaKnown RBP15.69■□□□□ 0.1
CDHR4-202ENST00000412678 USP35Q9P2H5 1018 aa15.68■□□□□ 0.1
CDHR4-202ENST00000412678 LAMC3Q9Y6N6 1575 aa15.68■□□□□ 0.1
CDHR4-202ENST00000412678 ARAP1Q96P48 1450 aa15.68■□□□□ 0.1
CDHR4-202ENST00000412678 ZBTB47Q9UFB7 747 aaPredicted RBP15.68■□□□□ 0.1
CDHR4-202ENST00000412678 SLC24A1O60721 1099 aa15.67■□□□□ 0.1
CDHR4-202ENST00000412678 NESP48681 1621 aa15.66■□□□□ 0.1
CDHR4-202ENST00000412678 WASHC2CQ9Y4E1 1318 aa15.65■□□□□ 0.1
CDHR4-202ENST00000412678 B4GALNT3Q6L9W6 998 aa15.62■□□□□ 0.09
CDHR4-202ENST00000412678 PDS5BQ9NTI5 1447 aa15.62■□□□□ 0.09
CDHR4-202ENST00000412678 PRDM2Q13029 1718 aa15.62■□□□□ 0.09
CDHR4-202ENST00000412678 FANCD2Q9BXW9 1451 aa15.6■□□□□ 0.09
CDHR4-202ENST00000412678 RSPH6AQ9H0K4 717 aa15.59■□□□□ 0.09
CDHR4-202ENST00000412678 SETD5Q9C0A6 1442 aa15.57■□□□□ 0.08
CDHR4-202ENST00000412678 TIMELESSQ9UNS1 1208 aa15.57■□□□□ 0.08
CDHR4-202ENST00000412678 GLIPR1L2Q4G1C9 344 aa15.56■□□□□ 0.08
CDHR4-202ENST00000412678 NEFMP07197 916 aa15.51■□□□□ 0.07
CDHR4-202ENST00000412678 PPM1GO15355 546 aaPredicted RBP15.5■□□□□ 0.07
CDHR4-202ENST00000412678 FAM50AQ14320 339 aaKnown RBP15.5■□□□□ 0.07
CDHR4-202ENST00000412678 ERCC6Q03468 1493 aa15.47■□□□□ 0.07
CDHR4-202ENST00000412678 PRXQ9BXM0 1461 aa15.47■□□□□ 0.07
CDHR4-202ENST00000412678 BRPF3Q9ULD4 1205 aa15.46■□□□□ 0.07
CDHR4-202ENST00000412678 ERICH3Q5RHP9 1530 aa15.46■□□□□ 0.07
CDHR4-202ENST00000412678 TOP2BQ02880 1626 aa15.46■□□□□ 0.07
CDHR4-202ENST00000412678 CUX1P39880 1505 aa15.46■□□□□ 0.07
CDHR4-202ENST00000412678 CCDC184Q52MB2 194 aa15.45■□□□□ 0.06
CDHR4-202ENST00000412678 KIF21AQ7Z4S6 1674 aa15.44■□□□□ 0.06
CDHR4-202ENST00000412678 GSE1Q14687 1217 aa15.43■□□□□ 0.06
CDHR4-202ENST00000412678 TONSLQ96HA7 1378 aa15.42■□□□□ 0.06
CDHR4-202ENST00000412678 FAM9BQ8IZU0 186 aa15.42■□□□□ 0.06
CDHR4-202ENST00000412678 FAM43AQ8N2R8 423 aa15.42■□□□□ 0.06
CDHR4-202ENST00000412678 ARHGAP35Q9NRY4 1499 aa15.42■□□□□ 0.06
CDHR4-202ENST00000412678 BIVM-ERCC5R4GMW8 1640 aa15.42■□□□□ 0.06
CDHR4-202ENST00000412678 PHLDB1Q86UU1 1377 aa15.41■□□□□ 0.06
CDHR4-202ENST00000412678 DAXXQ9UER7 740 aaPredicted RBP15.4■□□□□ 0.06
CDHR4-202ENST00000412678 DNMBPQ6XZF7 1577 aa15.4■□□□□ 0.06
CDHR4-202ENST00000412678 TOPBP1Q92547 1522 aa15.39■□□□□ 0.05
CDHR4-202ENST00000412678 PODXL2Q9NZ53 605 aa15.38■□□□□ 0.05
CDHR4-202ENST00000412678 ZBED9Q6R2W3 1325 aa15.38■□□□□ 0.05
CDHR4-202ENST00000412678 MRC2Q9UBG0 1479 aa15.38■□□□□ 0.05
CDHR4-202ENST00000412678 URB2Q14146 1524 aaKnown RBP15.38■□□□□ 0.05
CDHR4-202ENST00000412678 ZMYND15Q9H091 742 aa15.37■□□□□ 0.05
CDHR4-202ENST00000412678 LAS1LQ9Y4W2 734 aaKnown RBP15.37■□□□□ 0.05
CDHR4-202ENST00000412678 FGD5Q6ZNL6 1462 aa15.35■□□□□ 0.05
CDHR4-202ENST00000412678 TIAM1Q13009 1591 aa15.35■□□□□ 0.05
CDHR4-202ENST00000412678 LRRC9Q6ZRR7 1453 aa15.32■□□□□ 0.04
CDHR4-202ENST00000412678 VSIG10Q8N0Z9 540 aa15.32■□□□□ 0.04
CDHR4-202ENST00000412678 MRS2Q9HD23 443 aa15.32■□□□□ 0.04
CDHR4-202ENST00000412678 NPM2Q86SE8 214 aaKnown RBP15.31■□□□□ 0.04
CDHR4-202ENST00000412678 HSPA5P11021 654 aaKnown RBP15.31■□□□□ 0.04
CDHR4-202ENST00000412678 POLA1P09884 1462 aaPredicted RBP15.31■□□□□ 0.04
CDHR4-202ENST00000412678 ATP1B4Q9UN42 357 aaPredicted RBP15.29■□□□□ 0.04
CDHR4-202ENST00000412678 AKNAQ7Z591 1439 aa15.29■□□□□ 0.04
CDHR4-202ENST00000412678 RNF123Q5XPI4 1314 aa15.29■□□□□ 0.04
CDHR4-202ENST00000412678 TCERG1O14776 1098 aaKnown RBP15.28■□□□□ 0.04
CDHR4-202ENST00000412678 FHAD1B1AJZ9 1412 aa15.28■□□□□ 0.04
CDHR4-202ENST00000412678 DDRGK1Q96HY6 314 aa15.27■□□□□ 0.04
CDHR4-202ENST00000412678 WDR62O43379 1518 aa15.27■□□□□ 0.04
CDHR4-202ENST00000412678 SMG6Q86US8 1419 aaKnown RBP15.27■□□□□ 0.04
CDHR4-202ENST00000412678 PLEKHG5O94827 1062 aa15.27■□□□□ 0.03
CDHR4-202ENST00000412678 FRAT1Q92837 279 aaPredicted RBP15.27■□□□□ 0.03
CDHR4-202ENST00000412678 PRKRIP1Q9H875 184 aaPredicted RBP15.27■□□□□ 0.03
CDHR4-202ENST00000412678 KIF27Q86VH2 1401 aa15.26■□□□□ 0.03
CDHR4-202ENST00000412678 RAD54L2Q9Y4B4 1467 aa15.25■□□□□ 0.03
CDHR4-202ENST00000412678 SENP3-EIF4A1A0A087X0R7 540 aa15.24■□□□□ 0.03
CDHR4-202ENST00000412678 THOC2Q8NI27 1593 aaKnown RBP15.24■□□□□ 0.03
CDHR4-202ENST00000412678 MAP3K1Q13233 1512 aa15.23■□□□□ 0.03
CDHR4-202ENST00000412678 CNTLNQ9NXG0 1405 aa15.23■□□□□ 0.03
CDHR4-202ENST00000412678 MS4A1P11836 297 aa15.23■□□□□ 0.03
CDHR4-202ENST00000412678 NFKBIBQ15653 356 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms