RNA–Protein interactions for RNA: ENST00000412446.5

LINC00476-202, long intergenic non-protein coding RNA 476, humanhuman

TSL 1 (best)

Gene LINC00476, Length 809 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00476-202ENST00000412446 CCDC88BA6NC98 1476 aa15.16■□□□□ 0.02
LINC00476-202ENST00000412446 ABCC8Q09428 1581 aa15.15■□□□□ 0.02
LINC00476-202ENST00000412446 ABCC10Q5T3U5 1492 aa15.14■□□□□ 0.01
LINC00476-202ENST00000412446 FAM69CQ0P6D2 419 aa15.13■□□□□ 0.01
LINC00476-202ENST00000412446 MAPK8IP2Q13387 824 aaPredicted RBP15.12■□□□□ 0.01
LINC00476-202ENST00000412446 CHMP7Q8WUX9 453 aaPredicted RBP15.11■□□□□ 0.01
LINC00476-202ENST00000412446 DIP2BQ9P265 1576 aa15.1■□□□□ 0.01
LINC00476-202ENST00000412446 FOXD4L1Q9NU39 408 aa15.08■□□□□ 0
LINC00476-202ENST00000412446 DNMBPQ6XZF7 1577 aa15.07■□□□□ 0
LINC00476-202ENST00000412446 TSPOAP1O95153 1857 aa15.07■□□□□ 0
LINC00476-202ENST00000412446 TDRD9Q8NDG6 1382 aaKnown RBP15.06■□□□□ 0
LINC00476-202ENST00000412446 MAGI1Q96QZ7 1491 aaPredicted RBP15.06■□□□□ 0
LINC00476-202ENST00000412446 SPATA31D1Q6ZQQ2 1576 aa15.03■□□□□ -0
LINC00476-202ENST00000412446 POLA1P09884 1462 aaPredicted RBP15.03■□□□□ -0
LINC00476-202ENST00000412446 RAD54L2Q9Y4B4 1467 aa15.01□□□□□ -0.01
LINC00476-202ENST00000412446 RNF216Q9NWF9 866 aaPredicted RBP14.98□□□□□ -0.01
LINC00476-202ENST00000412446 CEP170Q5SW79 1584 aa14.98□□□□□ -0.01
LINC00476-202ENST00000412446 MAPKBP1O60336 1514 aa14.97□□□□□ -0.01
LINC00476-202ENST00000412446 WDR97A6NE52 1622 aa14.96□□□□□ -0.01
LINC00476-202ENST00000412446 GRIN2BQ13224 1484 aa14.91□□□□□ -0.02
LINC00476-202ENST00000412446 SHROOM2Q13796 1616 aa14.9□□□□□ -0.02
LINC00476-202ENST00000412446 SOGA1O94964 1423 aa14.88□□□□□ -0.03
LINC00476-202ENST00000412446 PPRC1Q5VV67 1664 aaKnown RBP14.87□□□□□ -0.03
LINC00476-202ENST00000412446 COL17A1Q9UMD9 1497 aaPredicted RBP14.86□□□□□ -0.03
LINC00476-202ENST00000412446 TOP2BQ02880 1626 aa14.83□□□□□ -0.04
LINC00476-202ENST00000412446 PBRM1Q86U86 1689 aa14.82□□□□□ -0.04
LINC00476-202ENST00000412446 CERKQ8TCT0 537 aa14.82□□□□□ -0.04
LINC00476-202ENST00000412446 ADCY10Q96PN6 1610 aa14.8□□□□□ -0.04
LINC00476-202ENST00000412446 FGD5Q6ZNL6 1462 aa14.79□□□□□ -0.04
LINC00476-202ENST00000412446 NUP160Q12769 1436 aa14.78□□□□□ -0.04
LINC00476-202ENST00000412446 CUX1P39880 1505 aa14.76□□□□□ -0.05
LINC00476-202ENST00000412446 GRIN2AQ12879 1464 aa14.75□□□□□ -0.05
LINC00476-202ENST00000412446 NPM1P06748 294 aaKnown RBP eCLIP14.74□□□□□ -0.05
LINC00476-202ENST00000412446 HOXD11P31277 338 aaPredicted RBP14.73□□□□□ -0.05
LINC00476-202ENST00000412446 DMRT2Q9Y5R5 561 aa14.71□□□□□ -0.05
LINC00476-202ENST00000412446 PCF11O94913 1555 aaKnown RBP14.7□□□□□ -0.06
LINC00476-202ENST00000412446 ABCA10Q8WWZ4 1543 aa14.7□□□□□ -0.06
LINC00476-202ENST00000412446 PRG4Q92954 1404 aaPredicted RBP14.69□□□□□ -0.06
LINC00476-202ENST00000412446 ABCA5Q8WWZ7 1642 aa14.66□□□□□ -0.06
LINC00476-202ENST00000412446 SLC4A2P04920 1241 aa14.66□□□□□ -0.06
LINC00476-202ENST00000412446 BIVM-ERCC5R4GMW8 1640 aa14.64□□□□□ -0.07
LINC00476-202ENST00000412446 WRNQ14191 1432 aaPredicted RBP eCLIP14.64□□□□□ -0.07
LINC00476-202ENST00000412446 GLI2P10070 1586 aa14.64□□□□□ -0.07
LINC00476-202ENST00000412446 PTPRMP28827 1452 aa14.63□□□□□ -0.07
LINC00476-202ENST00000412446 SUPT5HO00267 1087 aaKnown RBP14.62□□□□□ -0.07
LINC00476-202ENST00000412446 ADAMTS12P58397 1594 aa14.6□□□□□ -0.07
LINC00476-202ENST00000412446 KIF21BO75037 1637 aa14.59□□□□□ -0.07
LINC00476-202ENST00000412446 ADAMTSL3P82987 1691 aa14.57□□□□□ -0.08
LINC00476-202ENST00000412446 JPH4Q96JJ6 628 aa14.55□□□□□ -0.08
LINC00476-202ENST00000412446 ERICH3Q5RHP9 1530 aa14.55□□□□□ -0.08
LINC00476-202ENST00000412446 MAP3K4Q9Y6R4 1608 aa14.53□□□□□ -0.08
LINC00476-202ENST00000412446 HSPA2P54652 639 aa14.53□□□□□ -0.08
LINC00476-202ENST00000412446 FHAD1B1AJZ9 1412 aa14.5□□□□□ -0.09
LINC00476-202ENST00000412446 ASXL2Q76L83 1435 aa14.49□□□□□ -0.09
LINC00476-202ENST00000412446 TEX14Q8IWB6 1497 aa14.47□□□□□ -0.09
LINC00476-202ENST00000412446 MYCNP04198 464 aaPredicted RBP14.47□□□□□ -0.09
LINC00476-202ENST00000412446 ATXN8OSP0DMR3 200 aa14.46□□□□□ -0.09
LINC00476-202ENST00000412446 PLB1Q6P1J6 1458 aa14.45□□□□□ -0.1
LINC00476-202ENST00000412446 RTN4Q9NQC3 1192 aaKnown RBP14.45□□□□□ -0.1
LINC00476-202ENST00000412446 RUSC2Q8N2Y8 1516 aa14.43□□□□□ -0.1
LINC00476-202ENST00000412446 EPRSP07814 1512 aaKnown RBP14.41□□□□□ -0.1
LINC00476-202ENST00000412446 MADDQ8WXG6 1647 aa14.41□□□□□ -0.1
LINC00476-202ENST00000412446 AMER1Q5JTC6 1135 aaPredicted RBP14.4□□□□□ -0.1
LINC00476-202ENST00000412446 ABCC2Q92887 1545 aa14.4□□□□□ -0.1
LINC00476-202ENST00000412446 CUL7Q14999 1698 aa14.38□□□□□ -0.11
LINC00476-202ENST00000412446 KIAA0586Q9BVV6 1533 aa14.37□□□□□ -0.11
LINC00476-202ENST00000412446 BCORL1Q5H9F3 1711 aa14.37□□□□□ -0.11
LINC00476-202ENST00000412446 MED1Q15648 1581 aaPredicted RBP14.35□□□□□ -0.11
LINC00476-202ENST00000412446 KIF27Q86VH2 1401 aa14.34□□□□□ -0.11
LINC00476-202ENST00000412446 RIMS1Q86UR5 1692 aaKnown RBP14.31□□□□□ -0.12
LINC00476-202ENST00000412446 SLC24A1O60721 1099 aa14.31□□□□□ -0.12
LINC00476-202ENST00000412446 FKBP8Q14318 412 aa14.31□□□□□ -0.12
LINC00476-202ENST00000412446 STRCQ7RTU9 1775 aa14.31□□□□□ -0.12
LINC00476-202ENST00000412446 SRCAPQ6ZRS2 3230 aa14.28□□□□□ -0.12
LINC00476-202ENST00000412446 LTBP4Q8N2S1 1624 aa14.27□□□□□ -0.12
LINC00476-202ENST00000412446 IQSEC2Q5JU85 1478 aa14.25□□□□□ -0.13
LINC00476-202ENST00000412446 PTPRGP23470 1445 aa14.25□□□□□ -0.13
LINC00476-202ENST00000412446 IGF1RP08069 1367 aa14.25□□□□□ -0.13
LINC00476-202ENST00000412446 MAGI3Q5TCQ9 1506 aa14.24□□□□□ -0.13
LINC00476-202ENST00000412446 UHRF1BP1LA0JNW5 1464 aa14.23□□□□□ -0.13
LINC00476-202ENST00000412446 YEATS2Q9ULM3 1422 aa14.22□□□□□ -0.13
LINC00476-202ENST00000412446 KDM5BQ9UGL1 1544 aa14.19□□□□□ -0.14
LINC00476-202ENST00000412446 CARMIL1Q5VZK9 1371 aa14.18□□□□□ -0.14
LINC00476-202ENST00000412446 ARAP3Q8WWN8 1544 aa14.17□□□□□ -0.14
LINC00476-202ENST00000412446 ZCCHC11Q5TAX3 1644 aaKnown RBP14.17□□□□□ -0.14
LINC00476-202ENST00000412446 TTBK1Q5TCY1 1321 aaPredicted RBP14.16□□□□□ -0.14
LINC00476-202ENST00000412446 CFAP43Q8NDM7 1665 aa14.16□□□□□ -0.14
LINC00476-202ENST00000412446 CARMIL2Q6F5E8 1435 aa14.15□□□□□ -0.14
LINC00476-202ENST00000412446 CD109Q6YHK3 1445 aa14.15□□□□□ -0.14
LINC00476-202ENST00000412446 IQGAP2Q13576 1575 aa14.14□□□□□ -0.15
LINC00476-202ENST00000412446 TNIKQ9UKE5 1360 aa14.12□□□□□ -0.15
LINC00476-202ENST00000412446 PTPRTO14522 1441 aa14.12□□□□□ -0.15
LINC00476-202ENST00000412446 UACAQ9BZF9 1416 aa14.12□□□□□ -0.15
LINC00476-202ENST00000412446 PREX1Q8TCU6 1659 aa14.11□□□□□ -0.15
LINC00476-202ENST00000412446 WDR7Q9Y4E6 1490 aa14.11□□□□□ -0.15
LINC00476-202ENST00000412446 RAPGEF2Q9Y4G8 1499 aa14.1□□□□□ -0.15
LINC00476-202ENST00000412446 ARID4BQ4LE39 1312 aaPredicted RBP14.1□□□□□ -0.15
LINC00476-202ENST00000412446 ATF5Q9Y2D1 282 aaPredicted RBP14.09□□□□□ -0.15
LINC00476-202ENST00000412446 UBAP1LF5GYI3 381 aa14.08□□□□□ -0.16
LINC00476-202ENST00000412446 HSPA1LP34931 641 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms