RNA–Protein interactions for RNA: ENST00000412328.5

HSPG2-204, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-204ENST00000412328 KIAA0586Q9BVV6 1533 aa29.9■■■□□ 2.38
HSPG2-204ENST00000412328 PRG4Q92954 1404 aaPredicted RBP29.82■■■□□ 2.36
HSPG2-204ENST00000412328 CTTNBP2Q8WZ74 1663 aa29.8■■■□□ 2.36
HSPG2-204ENST00000412328 IQGAP2Q13576 1575 aa29.8■■■□□ 2.36
HSPG2-204ENST00000412328 RAPGEF2Q9Y4G8 1499 aa29.79■■■□□ 2.36
HSPG2-204ENST00000412328 JPH4Q96JJ6 628 aa29.73■■■□□ 2.35
HSPG2-204ENST00000412328 PRXQ9BXM0 1461 aa29.72■■■□□ 2.35
HSPG2-204ENST00000412328 ADCY10Q96PN6 1610 aa29.64■■■□□ 2.34
HSPG2-204ENST00000412328 UGGT2Q9NYU1 1516 aa29.63■■■□□ 2.33
HSPG2-204ENST00000412328 DISP1Q96F81 1524 aa29.61■■■□□ 2.33
HSPG2-204ENST00000412328 KIAA0556O60303 1618 aa29.57■■■□□ 2.32
HSPG2-204ENST00000412328 KIF13AQ9H1H9 1805 aa29.54■■■□□ 2.32
HSPG2-204ENST00000412328 EEA1Q15075 1411 aa29.53■■■□□ 2.32
HSPG2-204ENST00000412328 CARMIL2Q6F5E8 1435 aa29.45■■■□□ 2.31
HSPG2-204ENST00000412328 KIF21BO75037 1637 aa29.45■■■□□ 2.3
HSPG2-204ENST00000412328 MAPKBP1O60336 1514 aa29.45■■■□□ 2.3
HSPG2-204ENST00000412328 TNIKQ9UKE5 1360 aa29.42■■■□□ 2.3
HSPG2-204ENST00000412328 CHIC1Q5VXU3 224 aa29.4■■■□□ 2.3
HSPG2-204ENST00000412328 CSRNP3Q8WYN3 585 aa29.37■■■□□ 2.29
HSPG2-204ENST00000412328 PTPRGP23470 1445 aa29.37■■■□□ 2.29
HSPG2-204ENST00000412328 SAMD9Q5K651 1589 aa29.36■■■□□ 2.29
HSPG2-204ENST00000412328 UHRF1BP1LA0JNW5 1464 aa29.35■■■□□ 2.29
HSPG2-204ENST00000412328 DIP2BQ9P265 1576 aa29.34■■■□□ 2.29
HSPG2-204ENST00000412328 ABCC2Q92887 1545 aa29.33■■■□□ 2.29
HSPG2-204ENST00000412328 TRHP20396 242 aaPredicted RBP29.32■■■□□ 2.28
HSPG2-204ENST00000412328 GOLGA3Q08378 1498 aa29.3■■■□□ 2.28
HSPG2-204ENST00000412328 ZCCHC11Q5TAX3 1644 aaKnown RBP29.25■■■□□ 2.27
HSPG2-204ENST00000412328 UACAQ9BZF9 1416 aa29.25■■■□□ 2.27
HSPG2-204ENST00000412328 ABCA8O94911 1581 aa29.25■■■□□ 2.27
HSPG2-204ENST00000412328 ABCC10Q5T3U5 1492 aa29.23■■■□□ 2.27
HSPG2-204ENST00000412328 KDM5BQ9UGL1 1544 aa29.21■■■□□ 2.27
HSPG2-204ENST00000412328 PLB1Q6P1J6 1458 aa29.17■■■□□ 2.26
HSPG2-204ENST00000412328 FAM9AQ8IZU1 332 aaPredicted RBP29.13■■■□□ 2.25
HSPG2-204ENST00000412328 TTBK1Q5TCY1 1321 aaPredicted RBP29.11■■■□□ 2.25
HSPG2-204ENST00000412328 PPRC1Q5VV67 1664 aaKnown RBP29.1■■■□□ 2.25
HSPG2-204ENST00000412328 ASXL2Q76L83 1435 aa29.08■■■□□ 2.25
HSPG2-204ENST00000412328 GLI2P10070 1586 aa29.08■■■□□ 2.25
HSPG2-204ENST00000412328 EFCAB5A4FU69 1503 aa29.07■■■□□ 2.24
HSPG2-204ENST00000412328 TSPOAP1O95153 1857 aa29.06■■■□□ 2.24
HSPG2-204ENST00000412328 NPM1P06748 294 aaKnown RBP eCLIP29.05■■■□□ 2.24
HSPG2-204ENST00000412328 RAPGEF6Q8TEU7 1601 aa29.04■■■□□ 2.24
HSPG2-204ENST00000412328 MAP3K4Q9Y6R4 1608 aa29.02■■■□□ 2.24
HSPG2-204ENST00000412328 EPRSP07814 1512 aaKnown RBP28.97■■■□□ 2.23
HSPG2-204ENST00000412328 FHOD3Q2V2M9 1422 aa28.95■■■□□ 2.23
HSPG2-204ENST00000412328 WDR7Q9Y4E6 1490 aa28.94■■■□□ 2.22
HSPG2-204ENST00000412328 FAM69CQ0P6D2 419 aa28.94■■■□□ 2.22
HSPG2-204ENST00000412328 P3H3Q8IVL6 736 aa28.88■■■□□ 2.21
HSPG2-204ENST00000412328 NUP153P49790 1475 aaKnown RBP28.88■■■□□ 2.21
HSPG2-204ENST00000412328 CFAP43Q8NDM7 1665 aa28.88■■■□□ 2.21
HSPG2-204ENST00000412328 ARHGAP35Q9NRY4 1499 aa28.86■■■□□ 2.21
HSPG2-204ENST00000412328 ATP10BO94823 1461 aa28.85■■■□□ 2.21
HSPG2-204ENST00000412328 KDM6BO15054 1643 aa28.83■■■□□ 2.21
HSPG2-204ENST00000412328 LRRIQ1Q96JM4 1722 aa28.78■■■□□ 2.2
HSPG2-204ENST00000412328 ABCA9Q8IUA7 1624 aa28.76■■■□□ 2.19
HSPG2-204ENST00000412328 RANGAP1P46060 587 aaPredicted RBP28.74■■■□□ 2.19
HSPG2-204ENST00000412328 EHMT2Q96KQ7 1210 aa28.73■■■□□ 2.19
HSPG2-204ENST00000412328 UBTFP17480 764 aaKnown RBP28.72■■■□□ 2.19
HSPG2-204ENST00000412328 HECW1Q76N89 1606 aa28.71■■■□□ 2.19
HSPG2-204ENST00000412328 MAGI3Q5TCQ9 1506 aa28.68■■■□□ 2.18
HSPG2-204ENST00000412328 TEX14Q8IWB6 1497 aa28.66■■■□□ 2.18
HSPG2-204ENST00000412328 CDK13Q14004 1512 aaKnown RBP28.65■■■□□ 2.18
HSPG2-204ENST00000412328 FMN1Q68DA7 1419 aa28.65■■■□□ 2.18
HSPG2-204ENST00000412328 PCF11O94913 1555 aaKnown RBP28.63■■■□□ 2.17
HSPG2-204ENST00000412328 ARID3CA6NKF2 412 aa28.62■■■□□ 2.17
HSPG2-204ENST00000412328 COL17A1Q9UMD9 1497 aaPredicted RBP28.61■■■□□ 2.17
HSPG2-204ENST00000412328 CD109Q6YHK3 1445 aa28.58■■■□□ 2.17
HSPG2-204ENST00000412328 TTC37Q6PGP7 1564 aa28.57■■■□□ 2.16
HSPG2-204ENST00000412328 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.53■■■□□ 2.16
HSPG2-204ENST00000412328 KCNH8Q96L42 1107 aa28.5■■■□□ 2.15
HSPG2-204ENST00000412328 CLIP1P30622 1438 aa28.49■■■□□ 2.15
HSPG2-204ENST00000412328 KIF14Q15058 1648 aa28.47■■■□□ 2.15
HSPG2-204ENST00000412328 CASKIN1Q8WXD9 1431 aa28.46■■■□□ 2.15
HSPG2-204ENST00000412328 ARAP3Q8WWN8 1544 aa28.44■■■□□ 2.14
HSPG2-204ENST00000412328 FYCO1Q9BQS8 1478 aa28.44■■■□□ 2.14
HSPG2-204ENST00000412328 FRMPD1Q5SYB0 1578 aa28.43■■■□□ 2.14
HSPG2-204ENST00000412328 MYO5CQ9NQX4 1742 aa28.42■■■□□ 2.14
HSPG2-204ENST00000412328 CFAP74Q9C0B2 1584 aa28.41■■■□□ 2.14
HSPG2-204ENST00000412328 NEO1Q92859 1461 aa28.4■■■□□ 2.14
HSPG2-204ENST00000412328 CCDC18Q5T9S5 1454 aa28.39■■■□□ 2.13
HSPG2-204ENST00000412328 RICTORQ6R327 1708 aa28.38■■■□□ 2.13
HSPG2-204ENST00000412328 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.37■■■□□ 2.13
HSPG2-204ENST00000412328 HNRNPUL2Q1KMD3 747 aaKnown RBP28.37■■■□□ 2.13
HSPG2-204ENST00000412328 CEP162Q5TB80 1403 aa28.36■■■□□ 2.13
HSPG2-204ENST00000412328 PLEKHD1A6NEE1 506 aa28.33■■■□□ 2.13
HSPG2-204ENST00000412328 TROQ12816 1431 aaPredicted RBP28.33■■■□□ 2.13
HSPG2-204ENST00000412328 CDC42BPBQ9Y5S2 1711 aa28.29■■■□□ 2.12
HSPG2-204ENST00000412328 PHLDB1Q86UU1 1377 aa28.29■■■□□ 2.12
HSPG2-204ENST00000412328 PREX2Q70Z35 1606 aa28.27■■■□□ 2.12
HSPG2-204ENST00000412328 FANCAO15360 1455 aa28.27■■■□□ 2.12
HSPG2-204ENST00000412328 CDC42BPAQ5VT25 1732 aa28.26■■■□□ 2.12
HSPG2-204ENST00000412328 PLCH2O75038 1416 aa28.22■■■□□ 2.11
HSPG2-204ENST00000412328 ZMYM4Q5VZL5 1548 aa28.21■■■□□ 2.11
HSPG2-204ENST00000412328 AKNAQ7Z591 1439 aa28.19■■■□□ 2.1
HSPG2-204ENST00000412328 ATP1B4Q9UN42 357 aaPredicted RBP28.19■■■□□ 2.1
HSPG2-204ENST00000412328 ARHGEF40Q8TER5 1519 aa28.18■■■□□ 2.1
HSPG2-204ENST00000412328 ADGRL1O94910 1474 aa28.15■■■□□ 2.1
HSPG2-204ENST00000412328 CDK11AQ9UQ88 783 aaPredicted RBP28.14■■■□□ 2.1
HSPG2-204ENST00000412328 DENND4BO75064 1496 aaPredicted RBP28.12■■■□□ 2.09
HSPG2-204ENST00000412328 SIGLEC1Q9BZZ2 1709 aa28.12■■■□□ 2.09
HSPG2-204ENST00000412328 ITSN2Q9NZM3 1697 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms