RNA–Protein interactions for RNA: ENST00000411896.6

GRAMD1A-202, Transcript of GRAM domain containing 1A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene GRAMD1A, Length 2,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-202ENST00000411896 ABCA10Q8WWZ4 1543 aa24.66■■□□□ 1.54
GRAMD1A-202ENST00000411896 POLA1P09884 1462 aaPredicted RBP24.66■■□□□ 1.54
GRAMD1A-202ENST00000411896 ITGAEP38570 1179 aa24.65■■□□□ 1.54
GRAMD1A-202ENST00000411896 LRRC9Q6ZRR7 1453 aa24.64■■□□□ 1.54
GRAMD1A-202ENST00000411896 YTHDC1Q96MU7 727 aaKnown RBP24.64■■□□□ 1.54
GRAMD1A-202ENST00000411896 PCF11O94913 1555 aaKnown RBP24.61■■□□□ 1.53
GRAMD1A-202ENST00000411896 FHAD1B1AJZ9 1412 aa24.6■■□□□ 1.53
GRAMD1A-202ENST00000411896 P3H3Q8IVL6 736 aa24.6■■□□□ 1.53
GRAMD1A-202ENST00000411896 CFAP43Q8NDM7 1665 aa24.58■■□□□ 1.53
GRAMD1A-202ENST00000411896 PHLDB1Q86UU1 1377 aa24.58■■□□□ 1.52
GRAMD1A-202ENST00000411896 RAB3GAP2Q9H2M9 1393 aa24.56■■□□□ 1.52
GRAMD1A-202ENST00000411896 FHOD3Q2V2M9 1422 aa24.55■■□□□ 1.52
GRAMD1A-202ENST00000411896 CUL7Q14999 1698 aa24.53■■□□□ 1.52
GRAMD1A-202ENST00000411896 EFCAB5A4FU69 1503 aa24.5■■□□□ 1.51
GRAMD1A-202ENST00000411896 MAPKBP1O60336 1514 aa24.49■■□□□ 1.51
GRAMD1A-202ENST00000411896 URB2Q14146 1524 aaKnown RBP24.49■■□□□ 1.51
GRAMD1A-202ENST00000411896 ATP1B4Q9UN42 357 aaPredicted RBP24.47■■□□□ 1.51
GRAMD1A-202ENST00000411896 SETD5Q9C0A6 1442 aa24.47■■□□□ 1.51
GRAMD1A-202ENST00000411896 FYCO1Q9BQS8 1478 aa24.47■■□□□ 1.51
GRAMD1A-202ENST00000411896 WDR97A6NE52 1622 aa24.47■■□□□ 1.51
GRAMD1A-202ENST00000411896 CTTNBP2Q8WZ74 1663 aa24.47■■□□□ 1.51
GRAMD1A-202ENST00000411896 LAMC3Q9Y6N6 1575 aa24.46■■□□□ 1.51
GRAMD1A-202ENST00000411896 CASKIN1Q8WXD9 1431 aa24.44■■□□□ 1.5
GRAMD1A-202ENST00000411896 FAM50AQ14320 339 aaKnown RBP24.44■■□□□ 1.5
GRAMD1A-202ENST00000411896 AQRO60306 1485 aaKnown RBP eCLIP24.43■■□□□ 1.59e-7■■■■■ 49.5
GRAMD1A-202ENST00000411896 ABCA5Q8WWZ7 1642 aa24.37■■□□□ 1.49
GRAMD1A-202ENST00000411896 TDRD9Q8NDG6 1382 aaKnown RBP24.36■■□□□ 1.49
GRAMD1A-202ENST00000411896 SNAPC4Q5SXM2 1469 aa24.33■■□□□ 1.49
GRAMD1A-202ENST00000411896 FMN1Q68DA7 1419 aa24.32■■□□□ 1.48
GRAMD1A-202ENST00000411896 GAPVD1Q14C86 1478 aa24.31■■□□□ 1.48
GRAMD1A-202ENST00000411896 DNAJC5BQ9UF47 199 aa24.3■■□□□ 1.48
GRAMD1A-202ENST00000411896 SAMD9Q5K651 1589 aa24.29■■□□□ 1.48
GRAMD1A-202ENST00000411896 PDS5BQ9NTI5 1447 aa24.29■■□□□ 1.48
GRAMD1A-202ENST00000411896 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.28■■□□□ 1.482e-9■■■□□ 17.1
GRAMD1A-202ENST00000411896 SIN3AQ96ST3 1273 aa24.26■■□□□ 1.47
GRAMD1A-202ENST00000411896 KIF21AQ7Z4S6 1674 aa24.25■■□□□ 1.47
GRAMD1A-202ENST00000411896 FGD6Q6ZV73 1430 aa24.24■■□□□ 1.47
GRAMD1A-202ENST00000411896 LRRIQ1Q96JM4 1722 aa24.23■■□□□ 1.47
GRAMD1A-202ENST00000411896 GRIN2BQ13224 1484 aa24.2■■□□□ 1.46
GRAMD1A-202ENST00000411896 MTUS2Q5JR59 1369 aa24.2■■□□□ 1.46
GRAMD1A-202ENST00000411896 TARBP1Q13395 1621 aaKnown RBP24.18■■□□□ 1.46
GRAMD1A-202ENST00000411896 PTPRKQ15262 1439 aa24.14■■□□□ 1.45
GRAMD1A-202ENST00000411896 THOC2Q8NI27 1593 aaKnown RBP24.13■■□□□ 1.45
GRAMD1A-202ENST00000411896 NCOA2Q15596 1464 aa24.13■■□□□ 1.45
GRAMD1A-202ENST00000411896 MYOM3Q5VTT5 1437 aa24.09■■□□□ 1.45
GRAMD1A-202ENST00000411896 CCDC18Q5T9S5 1454 aa24.09■■□□□ 1.45
GRAMD1A-202ENST00000411896 TIMELESSQ9UNS1 1208 aa24.09■■□□□ 1.45
GRAMD1A-202ENST00000411896 EHBP1L1Q8N3D4 1523 aa24.08■■□□□ 1.45
GRAMD1A-202ENST00000411896 HFM1A2PYH4 1435 aa24.07■■□□□ 1.44
GRAMD1A-202ENST00000411896 SUPT6HQ7KZ85 1726 aaKnown RBP24.07■■□□□ 1.44
GRAMD1A-202ENST00000411896 PTPN23Q9H3S7 1636 aa24.06■■□□□ 1.44
GRAMD1A-202ENST00000411896 PBRM1Q86U86 1689 aa24.06■■□□□ 1.44
GRAMD1A-202ENST00000411896 MAGI3Q5TCQ9 1506 aa24.05■■□□□ 1.44
GRAMD1A-202ENST00000411896 PPP1R15AO75807 674 aaPredicted RBP24.03■■□□□ 1.44
GRAMD1A-202ENST00000411896 UGGT2Q9NYU1 1516 aa24.03■■□□□ 1.44
GRAMD1A-202ENST00000411896 ARHGEF11O15085 1522 aa24.02■■□□□ 1.44
GRAMD1A-202ENST00000411896 NAIPQ13075 1403 aa24.01■■□□□ 1.43
GRAMD1A-202ENST00000411896 KCNH8Q96L42 1107 aa24.01■■□□□ 1.43
GRAMD1A-202ENST00000411896 UACAQ9BZF9 1416 aa24■■□□□ 1.43
GRAMD1A-202ENST00000411896 ADAMTS12P58397 1594 aa23.99■■□□□ 1.43
GRAMD1A-202ENST00000411896 DDX10Q13206 875 aaKnown RBP23.99■■□□□ 1.43
GRAMD1A-202ENST00000411896 IQGAP2Q13576 1575 aa23.98■■□□□ 1.43
GRAMD1A-202ENST00000411896 HECW1Q76N89 1606 aa23.96■■□□□ 1.43
GRAMD1A-202ENST00000411896 MRC2Q9UBG0 1479 aa23.95■■□□□ 1.42
GRAMD1A-202ENST00000411896 HIRIP3Q9BW71 556 aaPredicted RBP23.93■■□□□ 1.42
GRAMD1A-202ENST00000411896 TONSLQ96HA7 1378 aa23.93■■□□□ 1.42
GRAMD1A-202ENST00000411896 TCOF1Q13428 1488 aaKnown RBP23.91■■□□□ 1.42
GRAMD1A-202ENST00000411896 EPRSP07814 1512 aaKnown RBP23.91■■□□□ 1.42
GRAMD1A-202ENST00000411896 CDK13Q14004 1512 aaKnown RBP23.89■■□□□ 1.41
GRAMD1A-202ENST00000411896 WDR62O43379 1518 aa23.88■■□□□ 1.41
GRAMD1A-202ENST00000411896 SUPT16HQ9Y5B9 1047 aaKnown RBP23.87■■□□□ 1.41
GRAMD1A-202ENST00000411896 RRP7BPQ9NSQ0 103 aa23.85■■□□□ 1.41
GRAMD1A-202ENST00000411896 ZNF608Q9ULD9 1512 aaPredicted RBP23.84■■□□□ 1.41
GRAMD1A-202ENST00000411896 CHIC2Q9UKJ5 165 aa23.83■■□□□ 1.41
GRAMD1A-202ENST00000411896 GCC2Q8IWJ2 1684 aa23.83■■□□□ 1.41
GRAMD1A-202ENST00000411896 KDM5BQ9UGL1 1544 aa23.82■■□□□ 1.4
GRAMD1A-202ENST00000411896 ARID3CA6NKF2 412 aa23.81■■□□□ 1.4
GRAMD1A-202ENST00000411896 IFT140Q96RY7 1462 aa23.8■■□□□ 1.4
GRAMD1A-202ENST00000411896 KDM6BO15054 1643 aa23.79■■□□□ 1.4
GRAMD1A-202ENST00000411896 DENND4BO75064 1496 aaPredicted RBP23.78■■□□□ 1.4
GRAMD1A-202ENST00000411896 AKNAQ7Z591 1439 aa23.78■■□□□ 1.4
GRAMD1A-202ENST00000411896 MIA2Q96PC5 1412 aa23.78■■□□□ 1.4
GRAMD1A-202ENST00000411896 KIAA0556O60303 1618 aa23.74■■□□□ 1.39
GRAMD1A-202ENST00000411896 DISP1Q96F81 1524 aa23.74■■□□□ 1.39
GRAMD1A-202ENST00000411896 KIAA0586Q9BVV6 1533 aa23.73■■□□□ 1.39
GRAMD1A-202ENST00000411896 TRIM52Q96A61 297 aa23.72■■□□□ 1.39
GRAMD1A-202ENST00000411896 CCER2I3L3R5 266 aa23.71■■□□□ 1.39
GRAMD1A-202ENST00000411896 ANP32CO43423 234 aa23.71■■□□□ 1.39
GRAMD1A-202ENST00000411896 NUP153P49790 1475 aaKnown RBP23.67■■□□□ 1.38
GRAMD1A-202ENST00000411896 EIF4G3O43432 1585 aaKnown RBP23.66■■□□□ 1.38
GRAMD1A-202ENST00000411896 GRIN2AQ12879 1464 aa23.66■■□□□ 1.38
GRAMD1A-202ENST00000411896 MPHOSPH9Q99550 1183 aa23.65■■□□□ 1.38
GRAMD1A-202ENST00000411896 DAPK1P53355 1430 aa23.64■■□□□ 1.38
GRAMD1A-202ENST00000411896 RAPGEF6Q8TEU7 1601 aa23.64■■□□□ 1.38
GRAMD1A-202ENST00000411896 ABCC5O15440 1437 aa23.61■■□□□ 1.37
GRAMD1A-202ENST00000411896 DNMT1P26358 1616 aaKnown RBP23.61■■□□□ 1.37
GRAMD1A-202ENST00000411896 ROCK1Q13464 1354 aa23.6■■□□□ 1.37
GRAMD1A-202ENST00000411896 ZNF644Q9H582 1327 aaPredicted RBP23.6■■□□□ 1.37
GRAMD1A-202ENST00000411896 FOXD1Q16676 465 aa23.59■■□□□ 1.37
GRAMD1A-202ENST00000411896 HSPA5P11021 654 aaKnown RBP23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms