RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 KIAA0586Q9BVV6 1533 aa30.2■■■□□ 2.42
CDC42-204ENST00000411827 CEP170Q5SW79 1584 aa30.15■■■□□ 2.42
CDC42-204ENST00000411827 LOC105371045A0A1W2PR82 267 aa30.13■■■□□ 2.41
CDC42-204ENST00000411827 CTTNBP2Q8WZ74 1663 aa30.11■■■□□ 2.41
CDC42-204ENST00000411827 IQGAP2Q13576 1575 aa30.08■■■□□ 2.41
CDC42-204ENST00000411827 EHMT2Q96KQ7 1210 aa30.08■■■□□ 2.41
CDC42-204ENST00000411827 CLASP1Q7Z460 1538 aa30.04■■■□□ 2.4
CDC42-204ENST00000411827 JPH4Q96JJ6 628 aa30■■■□□ 2.39
CDC42-204ENST00000411827 UGGT2Q9NYU1 1516 aa29.97■■■□□ 2.39
CDC42-204ENST00000411827 CARMIL2Q6F5E8 1435 aa29.91■■■□□ 2.38
CDC42-204ENST00000411827 SHROOM2Q13796 1616 aa29.91■■■□□ 2.38
CDC42-204ENST00000411827 EFCAB5A4FU69 1503 aa29.91■■■□□ 2.38
CDC42-204ENST00000411827 CEP162Q5TB80 1403 aa29.88■■■□□ 2.37
CDC42-204ENST00000411827 CLIP1P30622 1438 aa29.87■■■□□ 2.37
CDC42-204ENST00000411827 PRG4Q92954 1404 aaPredicted RBP29.83■■■□□ 2.37
CDC42-204ENST00000411827 RIMBP3CA6NJZ7 1639 aa29.81■■■□□ 2.36
CDC42-204ENST00000411827 RIMBP3BA6NNM3 1639 aa29.81■■■□□ 2.36
CDC42-204ENST00000411827 RIMBP3Q9UFD9 1639 aa29.81■■■□□ 2.36
CDC42-204ENST00000411827 SAMD9Q5K651 1589 aa29.8■■■□□ 2.36
CDC42-204ENST00000411827 DISP1Q96F81 1524 aa29.77■■■□□ 2.36
CDC42-204ENST00000411827 ARHGAP35Q9NRY4 1499 aa29.75■■■□□ 2.35
CDC42-204ENST00000411827 RANGAP1P46060 587 aaPredicted RBP29.75■■■□□ 2.35
CDC42-204ENST00000411827 KIAA0556O60303 1618 aa29.74■■■□□ 2.35
CDC42-204ENST00000411827 ARHGEF11O15085 1522 aa29.72■■■□□ 2.35
CDC42-204ENST00000411827 FMN1Q68DA7 1419 aa29.65■■■□□ 2.34
CDC42-204ENST00000411827 P3H3Q8IVL6 736 aa29.62■■■□□ 2.33
CDC42-204ENST00000411827 PTPRGP23470 1445 aa29.62■■■□□ 2.33
CDC42-204ENST00000411827 FHOD3Q2V2M9 1422 aa29.6■■■□□ 2.33
CDC42-204ENST00000411827 ARAP1Q96P48 1450 aa29.6■■■□□ 2.33
CDC42-204ENST00000411827 ERCC6L2Q5T890 1561 aa29.56■■■□□ 2.32
CDC42-204ENST00000411827 AEBP2Q6ZN18 517 aaPredicted RBP29.52■■■□□ 2.32
CDC42-204ENST00000411827 VPS8Q8N3P4 1428 aa29.52■■■□□ 2.32
CDC42-204ENST00000411827 CYB5RLQ6IPT4 315 aa29.51■■■□□ 2.31
CDC42-204ENST00000411827 CASKIN1Q8WXD9 1431 aa29.45■■■□□ 2.3
CDC42-204ENST00000411827 UACAQ9BZF9 1416 aa29.43■■■□□ 2.3
CDC42-204ENST00000411827 FYCO1Q9BQS8 1478 aa29.42■■■□□ 2.3
CDC42-204ENST00000411827 UHRF1BP1LA0JNW5 1464 aa29.4■■■□□ 2.3
CDC42-204ENST00000411827 TTBK1Q5TCY1 1321 aaPredicted RBP29.39■■■□□ 2.3
CDC42-204ENST00000411827 ABCA8O94911 1581 aa29.39■■■□□ 2.29
CDC42-204ENST00000411827 RAPGEF6Q8TEU7 1601 aa29.37■■■□□ 2.29
CDC42-204ENST00000411827 PLB1Q6P1J6 1458 aa29.36■■■□□ 2.29
CDC42-204ENST00000411827 ABCC2Q92887 1545 aa29.34■■■□□ 2.29
CDC42-204ENST00000411827 HECW1Q76N89 1606 aa29.34■■■□□ 2.29
CDC42-204ENST00000411827 PCF11O94913 1555 aaKnown RBP29.3■■■□□ 2.28
CDC42-204ENST00000411827 APLP2Q06481 763 aa29.29■■■□□ 2.28
CDC42-204ENST00000411827 CCDC18Q5T9S5 1454 aa29.29■■■□□ 2.28
CDC42-204ENST00000411827 NUP153P49790 1475 aaKnown RBP29.27■■■□□ 2.28
CDC42-204ENST00000411827 ATP1B4Q9UN42 357 aaPredicted RBP29.26■■■□□ 2.27
CDC42-204ENST00000411827 MAP3K1Q13233 1512 aa29.25■■■□□ 2.27
CDC42-204ENST00000411827 NPM1P06748 294 aaKnown RBP eCLIP29.23■■■□□ 2.27
CDC42-204ENST00000411827 EPRSP07814 1512 aaKnown RBP29.22■■■□□ 2.27
CDC42-204ENST00000411827 CDK11AQ9UQ88 783 aaPredicted RBP29.22■■■□□ 2.27
CDC42-204ENST00000411827 KDM5BQ9UGL1 1544 aa29.21■■■□□ 2.27
CDC42-204ENST00000411827 ADCY10Q96PN6 1610 aa29.2■■■□□ 2.26
CDC42-204ENST00000411827 ATP10BO94823 1461 aa29.17■■■□□ 2.26
CDC42-204ENST00000411827 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.12■■■□□ 2.25
CDC42-204ENST00000411827 HNRNPUL2Q1KMD3 747 aaKnown RBP29.12■■■□□ 2.25
CDC42-204ENST00000411827 TIAM1Q13009 1591 aa29.09■■■□□ 2.25
CDC42-204ENST00000411827 PLEKHD1A6NEE1 506 aa29.09■■■□□ 2.25
CDC42-204ENST00000411827 CFAP43Q8NDM7 1665 aa29.06■■■□□ 2.24
CDC42-204ENST00000411827 TRHP20396 242 aaPredicted RBP29.06■■■□□ 2.24
CDC42-204ENST00000411827 ZCCHC11Q5TAX3 1644 aaKnown RBP29.05■■■□□ 2.24
CDC42-204ENST00000411827 CDK13Q14004 1512 aaKnown RBP29.05■■■□□ 2.24
CDC42-204ENST00000411827 MTUS2Q5JR59 1369 aa29.02■■■□□ 2.24
CDC42-204ENST00000411827 ARID3CA6NKF2 412 aa29.02■■■□□ 2.24
CDC42-204ENST00000411827 LRRIQ1Q96JM4 1722 aa29.02■■■□□ 2.24
CDC42-204ENST00000411827 MAPKBP1O60336 1514 aa28.99■■■□□ 2.23
CDC42-204ENST00000411827 LRRC9Q6ZRR7 1453 aa28.99■■■□□ 2.23
CDC42-204ENST00000411827 TROQ12816 1431 aaPredicted RBP28.99■■■□□ 2.23
CDC42-204ENST00000411827 EHBP1L1Q8N3D4 1523 aa28.97■■■□□ 2.23
CDC42-204ENST00000411827 WDR7Q9Y4E6 1490 aa28.95■■■□□ 2.22
CDC42-204ENST00000411827 ASXL2Q76L83 1435 aa28.94■■■□□ 2.22
CDC42-204ENST00000411827 KANK4Q5T7N3 995 aaPredicted RBP28.9■■■□□ 2.22
CDC42-204ENST00000411827 MAGI3Q5TCQ9 1506 aa28.85■■■□□ 2.21
CDC42-204ENST00000411827 KIF14Q15058 1648 aa28.83■■■□□ 2.21
CDC42-204ENST00000411827 SUPT6HQ7KZ85 1726 aaKnown RBP28.82■■■□□ 2.2
CDC42-204ENST00000411827 KCNH8Q96L42 1107 aa28.78■■■□□ 2.2
CDC42-204ENST00000411827 NCOA2Q15596 1464 aa28.77■■■□□ 2.2
CDC42-204ENST00000411827 ABCC10Q5T3U5 1492 aa28.75■■■□□ 2.19
CDC42-204ENST00000411827 GLI2P10070 1586 aa28.74■■■□□ 2.19
CDC42-204ENST00000411827 CCNB3Q8WWL7 1395 aa28.72■■■□□ 2.19
CDC42-204ENST00000411827 ABCA9Q8IUA7 1624 aa28.7■■■□□ 2.19
CDC42-204ENST00000411827 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.69■■■□□ 2.185e-6■□□□□ 9.5
CDC42-204ENST00000411827 PPARGC1BQ86YN6 1023 aaKnown RBP28.66■■■□□ 2.18
CDC42-204ENST00000411827 ARAP3Q8WWN8 1544 aa28.65■■■□□ 2.18
CDC42-204ENST00000411827 FAM69CQ0P6D2 419 aa28.65■■■□□ 2.18
CDC42-204ENST00000411827 MYOM3Q5VTT5 1437 aa28.65■■■□□ 2.18
CDC42-204ENST00000411827 DIP2BQ9P265 1576 aa28.65■■■□□ 2.18
CDC42-204ENST00000411827 MIA2Q96PC5 1412 aa28.64■■■□□ 2.18
CDC42-204ENST00000411827 PLCH2O75038 1416 aa28.62■■■□□ 2.17
CDC42-204ENST00000411827 GPATCH8Q9UKJ3 1502 aaKnown RBP28.62■■■□□ 2.17
CDC42-204ENST00000411827 CD109Q6YHK3 1445 aa28.61■■■□□ 2.17
CDC42-204ENST00000411827 ITSN2Q9NZM3 1697 aa28.61■■■□□ 2.17
CDC42-204ENST00000411827 PHLDB1Q86UU1 1377 aa28.61■■■□□ 2.17
CDC42-204ENST00000411827 TTC37Q6PGP7 1564 aa28.6■■■□□ 2.17
CDC42-204ENST00000411827 CFDP1Q9UEE9 299 aaPredicted RBP28.59■■■□□ 2.17
CDC42-204ENST00000411827 MYO5CQ9NQX4 1742 aa28.57■■■□□ 2.16
CDC42-204ENST00000411827 EFCAB2Q5VUJ9 269 aa28.57■■■□□ 2.16
CDC42-204ENST00000411827 MAP3K4Q9Y6R4 1608 aa28.55■■■□□ 2.16
CDC42-204ENST00000411827 PREX2Q70Z35 1606 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms