RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 JPH4Q96JJ6 628 aa20.04■□□□□ 0.8
NEDD1-202ENST00000411739 ARAP1Q96P48 1450 aa20.04■□□□□ 0.8
NEDD1-202ENST00000411739 CSRNP3Q8WYN3 585 aa20.03■□□□□ 0.8
NEDD1-202ENST00000411739 RAPGEF2Q9Y4G8 1499 aa20.03■□□□□ 0.8
NEDD1-202ENST00000411739 PRG4Q92954 1404 aaPredicted RBP19.99■□□□□ 0.79
NEDD1-202ENST00000411739 KIAA0586Q9BVV6 1533 aa19.98■□□□□ 0.79
NEDD1-202ENST00000411739 EHMT2Q96KQ7 1210 aa19.97■□□□□ 0.79
NEDD1-202ENST00000411739 SHROOM2Q13796 1616 aa19.96■□□□□ 0.79
NEDD1-202ENST00000411739 PRXQ9BXM0 1461 aa19.96■□□□□ 0.79
NEDD1-202ENST00000411739 TTBK1Q5TCY1 1321 aaPredicted RBP19.92■□□□□ 0.78
NEDD1-202ENST00000411739 EEA1Q15075 1411 aa19.91■□□□□ 0.78
NEDD1-202ENST00000411739 IQGAP2Q13576 1575 aa19.87■□□□□ 0.77
NEDD1-202ENST00000411739 RANGAP1P46060 587 aaPredicted RBP19.83■□□□□ 0.76
NEDD1-202ENST00000411739 CTTNBP2Q8WZ74 1663 aa19.79■□□□□ 0.76
NEDD1-202ENST00000411739 DISP1Q96F81 1524 aa19.77■□□□□ 0.76
NEDD1-202ENST00000411739 CARMIL2Q6F5E8 1435 aa19.77■□□□□ 0.76
NEDD1-202ENST00000411739 P3H3Q8IVL6 736 aa19.75■□□□□ 0.75
NEDD1-202ENST00000411739 UGGT2Q9NYU1 1516 aa19.75■□□□□ 0.75
NEDD1-202ENST00000411739 PTPRGP23470 1445 aa19.74■□□□□ 0.75
NEDD1-202ENST00000411739 UBTFP17480 764 aaKnown RBP19.74■□□□□ 0.75
NEDD1-202ENST00000411739 KIF21BO75037 1637 aa19.73■□□□□ 0.75
NEDD1-202ENST00000411739 TNIKQ9UKE5 1360 aa19.73■□□□□ 0.75
NEDD1-202ENST00000411739 TRHP20396 242 aaPredicted RBP19.71■□□□□ 0.75
NEDD1-202ENST00000411739 KIAA0556O60303 1618 aa19.68■□□□□ 0.74
NEDD1-202ENST00000411739 GOLGA3Q08378 1498 aa19.66■□□□□ 0.74
NEDD1-202ENST00000411739 ADCY10Q96PN6 1610 aa19.64■□□□□ 0.73
NEDD1-202ENST00000411739 NPM1P06748 294 aaKnown RBP eCLIP19.62■□□□□ 0.73
NEDD1-202ENST00000411739 UACAQ9BZF9 1416 aa19.58■□□□□ 0.73
NEDD1-202ENST00000411739 PLB1Q6P1J6 1458 aa19.57■□□□□ 0.72
NEDD1-202ENST00000411739 ARID3CA6NKF2 412 aa19.56■□□□□ 0.72
NEDD1-202ENST00000411739 FHOD3Q2V2M9 1422 aa19.56■□□□□ 0.72
NEDD1-202ENST00000411739 SAMD9Q5K651 1589 aa19.55■□□□□ 0.72
NEDD1-202ENST00000411739 ABCC2Q92887 1545 aa19.52■□□□□ 0.71
NEDD1-202ENST00000411739 LOC105371045A0A1W2PR82 267 aa19.51■□□□□ 0.71
NEDD1-202ENST00000411739 UHRF1BP1LA0JNW5 1464 aa19.5■□□□□ 0.71
NEDD1-202ENST00000411739 ABCA8O94911 1581 aa19.47■□□□□ 0.71
NEDD1-202ENST00000411739 FAM69CQ0P6D2 419 aa19.46■□□□□ 0.71
NEDD1-202ENST00000411739 ARHGAP35Q9NRY4 1499 aa19.45■□□□□ 0.7
NEDD1-202ENST00000411739 MAPKBP1O60336 1514 aa19.44■□□□□ 0.7
NEDD1-202ENST00000411739 KDM5BQ9UGL1 1544 aa19.44■□□□□ 0.7
NEDD1-202ENST00000411739 EFCAB5A4FU69 1503 aa19.43■□□□□ 0.7
NEDD1-202ENST00000411739 ASXL2Q76L83 1435 aa19.43■□□□□ 0.7
NEDD1-202ENST00000411739 ZCCHC11Q5TAX3 1644 aaKnown RBP19.42■□□□□ 0.7
NEDD1-202ENST00000411739 ATP1B4Q9UN42 357 aaPredicted RBP19.41■□□□□ 0.7
NEDD1-202ENST00000411739 ABCC10Q5T3U5 1492 aa19.4■□□□□ 0.7
NEDD1-202ENST00000411739 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.4■□□□□ 0.7
NEDD1-202ENST00000411739 HNRNPUL2Q1KMD3 747 aaKnown RBP19.4■□□□□ 0.7
NEDD1-202ENST00000411739 KIF13AQ9H1H9 1805 aa19.38■□□□□ 0.69
NEDD1-202ENST00000411739 RAPGEF6Q8TEU7 1601 aa19.38■□□□□ 0.69
NEDD1-202ENST00000411739 KCNH8Q96L42 1107 aa19.37■□□□□ 0.69
NEDD1-202ENST00000411739 ATP10BO94823 1461 aa19.37■□□□□ 0.69
NEDD1-202ENST00000411739 DIP2BQ9P265 1576 aa19.36■□□□□ 0.69
NEDD1-202ENST00000411739 CLIP1P30622 1438 aa19.35■□□□□ 0.69
NEDD1-202ENST00000411739 NUP153P49790 1475 aaKnown RBP19.34■□□□□ 0.69
NEDD1-202ENST00000411739 WDR7Q9Y4E6 1490 aa19.3■□□□□ 0.68
NEDD1-202ENST00000411739 FMN1Q68DA7 1419 aa19.3■□□□□ 0.68
NEDD1-202ENST00000411739 EPRSP07814 1512 aaKnown RBP19.29■□□□□ 0.68
NEDD1-202ENST00000411739 TSPOAP1O95153 1857 aa19.28■□□□□ 0.68
NEDD1-202ENST00000411739 CEP162Q5TB80 1403 aa19.28■□□□□ 0.68
NEDD1-202ENST00000411739 CDK13Q14004 1512 aaKnown RBP19.26■□□□□ 0.67
NEDD1-202ENST00000411739 PLEKHD1A6NEE1 506 aa19.22■□□□□ 0.67
NEDD1-202ENST00000411739 GLI2P10070 1586 aa19.21■□□□□ 0.67
NEDD1-202ENST00000411739 PCF11O94913 1555 aaKnown RBP19.2■□□□□ 0.66
NEDD1-202ENST00000411739 HECW1Q76N89 1606 aa19.19■□□□□ 0.66
NEDD1-202ENST00000411739 CASKIN1Q8WXD9 1431 aa19.17■□□□□ 0.66
NEDD1-202ENST00000411739 CD109Q6YHK3 1445 aa19.16■□□□□ 0.66
NEDD1-202ENST00000411739 LRRIQ1Q96JM4 1722 aa19.16■□□□□ 0.66
NEDD1-202ENST00000411739 MAP3K4Q9Y6R4 1608 aa19.15■□□□□ 0.66
NEDD1-202ENST00000411739 PPRC1Q5VV67 1664 aaKnown RBP19.14■□□□□ 0.66
NEDD1-202ENST00000411739 CDK11AQ9UQ88 783 aaPredicted RBP19.1■□□□□ 0.65
NEDD1-202ENST00000411739 FYCO1Q9BQS8 1478 aa19.1■□□□□ 0.65
NEDD1-202ENST00000411739 CFAP43Q8NDM7 1665 aa19.08■□□□□ 0.64
NEDD1-202ENST00000411739 ABCA9Q8IUA7 1624 aa19.06■□□□□ 0.64
NEDD1-202ENST00000411739 COL17A1Q9UMD9 1497 aaPredicted RBP19.05■□□□□ 0.64
NEDD1-202ENST00000411739 CCDC18Q5T9S5 1454 aa19.05■□□□□ 0.64
NEDD1-202ENST00000411739 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.05■□□□□ 0.64
NEDD1-202ENST00000411739 KDM6BO15054 1643 aa19.05■□□□□ 0.64
NEDD1-202ENST00000411739 TEX14Q8IWB6 1497 aa19.05■□□□□ 0.64
NEDD1-202ENST00000411739 MAGI3Q5TCQ9 1506 aa19.04■□□□□ 0.64
NEDD1-202ENST00000411739 TROQ12816 1431 aaPredicted RBP19.04■□□□□ 0.64
NEDD1-202ENST00000411739 TTC37Q6PGP7 1564 aa19.03■□□□□ 0.64
NEDD1-202ENST00000411739 KIF14Q15058 1648 aa19.03■□□□□ 0.64
NEDD1-202ENST00000411739 VPS8Q8N3P4 1428 aa19.01■□□□□ 0.63
NEDD1-202ENST00000411739 RAPGEF3O95398 923 aa18.95■□□□□ 0.62
NEDD1-202ENST00000411739 MTUS2Q5JR59 1369 aa18.95■□□□□ 0.62
NEDD1-202ENST00000411739 PLCH2O75038 1416 aa18.93■□□□□ 0.62
NEDD1-202ENST00000411739 FANCAO15360 1455 aa18.93■□□□□ 0.62
NEDD1-202ENST00000411739 AKNAQ7Z591 1439 aa18.91■□□□□ 0.62
NEDD1-202ENST00000411739 NEO1Q92859 1461 aa18.9■□□□□ 0.62
NEDD1-202ENST00000411739 KANK4Q5T7N3 995 aaPredicted RBP18.9■□□□□ 0.62
NEDD1-202ENST00000411739 EFCAB2Q5VUJ9 269 aa18.89■□□□□ 0.61
NEDD1-202ENST00000411739 MYO5CQ9NQX4 1742 aa18.88■□□□□ 0.61
NEDD1-202ENST00000411739 ARAP3Q8WWN8 1544 aa18.88■□□□□ 0.61
NEDD1-202ENST00000411739 ZNF777Q9ULD5 760 aaPredicted RBP18.88■□□□□ 0.61
NEDD1-202ENST00000411739 TIAM1Q13009 1591 aa18.87■□□□□ 0.61
NEDD1-202ENST00000411739 ARHGAP5Q13017 1502 aa18.87■□□□□ 0.61
NEDD1-202ENST00000411739 PHLDB1Q86UU1 1377 aa18.85■□□□□ 0.61
NEDD1-202ENST00000411739 APLP2Q06481 763 aa18.84■□□□□ 0.61
NEDD1-202ENST00000411739 SCAPERQ9BY12 1400 aa18.84■□□□□ 0.61
NEDD1-202ENST00000411739 CDC42BPBQ9Y5S2 1711 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms