RNA–Protein interactions for RNA: ENST00000411533.5

RCC1-205, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 5

Gene RCC1, Length 1,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-205ENST00000411533 SHROOM2Q13796 1616 aa23.77■■□□□ 1.4
RCC1-205ENST00000411533 ARHGEF11O15085 1522 aa23.73■■□□□ 1.39
RCC1-205ENST00000411533 IQGAP2Q13576 1575 aa23.7■■□□□ 1.38
RCC1-205ENST00000411533 CTTNBP2Q8WZ74 1663 aa23.7■■□□□ 1.38
RCC1-205ENST00000411533 RIMBP3CA6NJZ7 1639 aa23.69■■□□□ 1.38
RCC1-205ENST00000411533 RIMBP3BA6NNM3 1639 aa23.69■■□□□ 1.38
RCC1-205ENST00000411533 RIMBP3Q9UFD9 1639 aa23.69■■□□□ 1.38
RCC1-205ENST00000411533 GOLGA3Q08378 1498 aa23.66■■□□□ 1.38
RCC1-205ENST00000411533 JPH4Q96JJ6 628 aa23.65■■□□□ 1.38
RCC1-205ENST00000411533 ERCC6L2Q5T890 1561 aa23.61■■□□□ 1.37
RCC1-205ENST00000411533 UGGT2Q9NYU1 1516 aa23.61■■□□□ 1.37
RCC1-205ENST00000411533 PRG4Q92954 1404 aaPredicted RBP23.6■■□□□ 1.37
RCC1-205ENST00000411533 ARAP1Q96P48 1450 aa23.56■■□□□ 1.36
RCC1-205ENST00000411533 DISP1Q96F81 1524 aa23.53■■□□□ 1.36
RCC1-205ENST00000411533 CARMIL2Q6F5E8 1435 aa23.5■■□□□ 1.35
RCC1-205ENST00000411533 KIAA0556O60303 1618 aa23.49■■□□□ 1.35
RCC1-205ENST00000411533 UBTFP17480 764 aaKnown RBP23.46■■□□□ 1.35
RCC1-205ENST00000411533 SAMD9Q5K651 1589 aa23.45■■□□□ 1.34
RCC1-205ENST00000411533 EHMT2Q96KQ7 1210 aa23.44■■□□□ 1.34
RCC1-205ENST00000411533 TNIKQ9UKE5 1360 aa23.41■■□□□ 1.34
RCC1-205ENST00000411533 CYB5RLQ6IPT4 315 aa23.4■■□□□ 1.34
RCC1-205ENST00000411533 EFCAB5A4FU69 1503 aa23.38■■□□□ 1.33
RCC1-205ENST00000411533 PTPRGP23470 1445 aa23.35■■□□□ 1.33
RCC1-205ENST00000411533 ARHGAP35Q9NRY4 1499 aa23.3■■□□□ 1.32
RCC1-205ENST00000411533 FHOD3Q2V2M9 1422 aa23.26■■□□□ 1.31
RCC1-205ENST00000411533 LOC105371045A0A1W2PR82 267 aa23.26■■□□□ 1.31
RCC1-205ENST00000411533 RANGAP1P46060 587 aaPredicted RBP23.26■■□□□ 1.31
RCC1-205ENST00000411533 ADCY10Q96PN6 1610 aa23.25■■□□□ 1.31
RCC1-205ENST00000411533 UHRF1BP1LA0JNW5 1464 aa23.24■■□□□ 1.31
RCC1-205ENST00000411533 P3H3Q8IVL6 736 aa23.24■■□□□ 1.31
RCC1-205ENST00000411533 UACAQ9BZF9 1416 aa23.23■■□□□ 1.31
RCC1-205ENST00000411533 CLIP1P30622 1438 aa23.22■■□□□ 1.31
RCC1-205ENST00000411533 ABCC2Q92887 1545 aa23.22■■□□□ 1.31
RCC1-205ENST00000411533 ABCA8O94911 1581 aa23.22■■□□□ 1.31
RCC1-205ENST00000411533 TTBK1Q5TCY1 1321 aaPredicted RBP23.21■■□□□ 1.31
RCC1-205ENST00000411533 PLB1Q6P1J6 1458 aa23.19■■□□□ 1.3
RCC1-205ENST00000411533 CEP162Q5TB80 1403 aa23.18■■□□□ 1.3
RCC1-205ENST00000411533 FMN1Q68DA7 1419 aa23.14■■□□□ 1.29
RCC1-205ENST00000411533 RAPGEF6Q8TEU7 1601 aa23.13■■□□□ 1.29
RCC1-205ENST00000411533 KDM5BQ9UGL1 1544 aa23.12■■□□□ 1.29
RCC1-205ENST00000411533 MAPKBP1O60336 1514 aa23.08■■□□□ 1.28
RCC1-205ENST00000411533 NUP153P49790 1475 aaKnown RBP23.06■■□□□ 1.28
RCC1-205ENST00000411533 NPM1P06748 294 aaKnown RBP eCLIP23.05■■□□□ 1.28
RCC1-205ENST00000411533 ZCCHC11Q5TAX3 1644 aaKnown RBP23.04■■□□□ 1.28
RCC1-205ENST00000411533 HECW1Q76N89 1606 aa23■■□□□ 1.27
RCC1-205ENST00000411533 PCF11O94913 1555 aaKnown RBP23■■□□□ 1.27
RCC1-205ENST00000411533 CASKIN1Q8WXD9 1431 aa22.99■■□□□ 1.27
RCC1-205ENST00000411533 ATP10BO94823 1461 aa22.99■■□□□ 1.27
RCC1-205ENST00000411533 FYCO1Q9BQS8 1478 aa22.97■■□□□ 1.27
RCC1-205ENST00000411533 ASXL2Q76L83 1435 aa22.95■■□□□ 1.26
RCC1-205ENST00000411533 EPRSP07814 1512 aaKnown RBP22.93■■□□□ 1.26
RCC1-205ENST00000411533 ABCC10Q5T3U5 1492 aa22.91■■□□□ 1.26
RCC1-205ENST00000411533 WDR7Q9Y4E6 1490 aa22.91■■□□□ 1.26
RCC1-205ENST00000411533 VPS8Q8N3P4 1428 aa22.91■■□□□ 1.26
RCC1-205ENST00000411533 LRRIQ1Q96JM4 1722 aa22.9■■□□□ 1.26
RCC1-205ENST00000411533 DIP2BQ9P265 1576 aa22.89■■□□□ 1.26
RCC1-205ENST00000411533 CDK13Q14004 1512 aaKnown RBP22.89■■□□□ 1.26
RCC1-205ENST00000411533 CCDC18Q5T9S5 1454 aa22.88■■□□□ 1.25
RCC1-205ENST00000411533 ARID3CA6NKF2 412 aa22.88■■□□□ 1.25
RCC1-205ENST00000411533 KIF13AQ9H1H9 1805 aa22.85■■□□□ 1.25
RCC1-205ENST00000411533 GLI2P10070 1586 aa22.84■■□□□ 1.25
RCC1-205ENST00000411533 ATP1B4Q9UN42 357 aaPredicted RBP22.83■■□□□ 1.25
RCC1-205ENST00000411533 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.81■■□□□ 1.24
RCC1-205ENST00000411533 HNRNPUL2Q1KMD3 747 aaKnown RBP22.81■■□□□ 1.24
RCC1-205ENST00000411533 TRHP20396 242 aaPredicted RBP22.79■■□□□ 1.24
RCC1-205ENST00000411533 FAM69CQ0P6D2 419 aa22.77■■□□□ 1.24
RCC1-205ENST00000411533 PLEKHD1A6NEE1 506 aa22.76■■□□□ 1.23
RCC1-205ENST00000411533 CDK11AQ9UQ88 783 aaPredicted RBP22.75■■□□□ 1.23
RCC1-205ENST00000411533 CFAP43Q8NDM7 1665 aa22.74■■□□□ 1.23
RCC1-205ENST00000411533 TROQ12816 1431 aaPredicted RBP22.74■■□□□ 1.23
RCC1-205ENST00000411533 MAP3K4Q9Y6R4 1608 aa22.73■■□□□ 1.23
RCC1-205ENST00000411533 MAGI3Q5TCQ9 1506 aa22.72■■□□□ 1.23
RCC1-205ENST00000411533 ABCA9Q8IUA7 1624 aa22.71■■□□□ 1.23
RCC1-205ENST00000411533 MAP3K1Q13233 1512 aa22.71■■□□□ 1.23
RCC1-205ENST00000411533 TIAM1Q13009 1591 aa22.71■■□□□ 1.23
RCC1-205ENST00000411533 KCNH8Q96L42 1107 aa22.69■■□□□ 1.22
RCC1-205ENST00000411533 KIF14Q15058 1648 aa22.67■■□□□ 1.22
RCC1-205ENST00000411533 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.66■■□□□ 1.22
RCC1-205ENST00000411533 EHBP1L1Q8N3D4 1523 aa22.65■■□□□ 1.22
RCC1-205ENST00000411533 PPRC1Q5VV67 1664 aaKnown RBP22.65■■□□□ 1.22
RCC1-205ENST00000411533 TTC37Q6PGP7 1564 aa22.63■■□□□ 1.21
RCC1-205ENST00000411533 CD109Q6YHK3 1445 aa22.63■■□□□ 1.21
RCC1-205ENST00000411533 MTUS2Q5JR59 1369 aa22.61■■□□□ 1.21
RCC1-205ENST00000411533 LRRC9Q6ZRR7 1453 aa22.6■■□□□ 1.21
RCC1-205ENST00000411533 TSPOAP1O95153 1857 aa22.58■■□□□ 1.21
RCC1-205ENST00000411533 TEX14Q8IWB6 1497 aa22.58■■□□□ 1.2
RCC1-205ENST00000411533 ARAP3Q8WWN8 1544 aa22.55■■□□□ 1.2
RCC1-205ENST00000411533 PLCH2O75038 1416 aa22.53■■□□□ 1.2
RCC1-205ENST00000411533 MYO5CQ9NQX4 1742 aa22.53■■□□□ 1.2
RCC1-205ENST00000411533 APLP2Q06481 763 aa22.52■■□□□ 1.2
RCC1-205ENST00000411533 SUPT6HQ7KZ85 1726 aaKnown RBP22.51■■□□□ 1.19
RCC1-205ENST00000411533 KANK4Q5T7N3 995 aaPredicted RBP22.51■■□□□ 1.19
RCC1-205ENST00000411533 PREX2Q70Z35 1606 aa22.49■■□□□ 1.19
RCC1-205ENST00000411533 NEO1Q92859 1461 aa22.49■■□□□ 1.19
RCC1-205ENST00000411533 NCOA2Q15596 1464 aa22.48■■□□□ 1.19
RCC1-205ENST00000411533 CDC42BPAQ5VT25 1732 aa22.48■■□□□ 1.19
RCC1-205ENST00000411533 CFAP74Q9C0B2 1584 aa22.47■■□□□ 1.19
RCC1-205ENST00000411533 GPATCH8Q9UKJ3 1502 aaKnown RBP22.47■■□□□ 1.19
RCC1-205ENST00000411533 PHLDB1Q86UU1 1377 aa22.46■■□□□ 1.19
RCC1-205ENST00000411533 FANCAO15360 1455 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms