RNA–Protein interactions for RNA: ENST00000410465.1

RN7SKP229-201, Transcript of RNA, 7SK small nuclear pseudogene 229, humanhuman

BASIC

Gene RN7SKP229, Length 302 nt, Biotype misc RNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP229-201ENST00000410465 SHROOM2Q13796 1616 aa11.12□□□□□ -0.63
RN7SKP229-201ENST00000410465 DISP3Q9P2K9 1392 aa11.11□□□□□ -0.63
RN7SKP229-201ENST00000410465 GRIN2AQ12879 1464 aa11.11□□□□□ -0.63
RN7SKP229-201ENST00000410465 NUP160Q12769 1436 aa11.09□□□□□ -0.63
RN7SKP229-201ENST00000410465 PRG4Q92954 1404 aaPredicted RBP11.07□□□□□ -0.64
RN7SKP229-201ENST00000410465 CUX1P39880 1505 aa11.04□□□□□ -0.64
RN7SKP229-201ENST00000410465 ADCY10Q96PN6 1610 aa11.04□□□□□ -0.64
RN7SKP229-201ENST00000410465 COL17A1Q9UMD9 1497 aaPredicted RBP11.03□□□□□ -0.64
RN7SKP229-201ENST00000410465 ABCA5Q8WWZ7 1642 aa11.02□□□□□ -0.65
RN7SKP229-201ENST00000410465 JPH4Q96JJ6 628 aa11.01□□□□□ -0.65
RN7SKP229-201ENST00000410465 PPRC1Q5VV67 1664 aaKnown RBP11.01□□□□□ -0.65
RN7SKP229-201ENST00000410465 ADAMTS12P58397 1594 aa10.99□□□□□ -0.65
RN7SKP229-201ENST00000410465 ABCA10Q8WWZ4 1543 aa10.97□□□□□ -0.65
RN7SKP229-201ENST00000410465 TOP2BQ02880 1626 aa10.95□□□□□ -0.66
RN7SKP229-201ENST00000410465 FHAD1B1AJZ9 1412 aa10.93□□□□□ -0.66
RN7SKP229-201ENST00000410465 CERKQ8TCT0 537 aa10.91□□□□□ -0.66
RN7SKP229-201ENST00000410465 SPATA31D1Q6ZQQ2 1576 aa10.9□□□□□ -0.66
RN7SKP229-201ENST00000410465 GLI2P10070 1586 aa10.89□□□□□ -0.67
RN7SKP229-201ENST00000410465 ASXL2Q76L83 1435 aa10.87□□□□□ -0.67
RN7SKP229-201ENST00000410465 RUSC2Q8N2Y8 1516 aa10.85□□□□□ -0.67
RN7SKP229-201ENST00000410465 PTPRMP28827 1452 aa10.84□□□□□ -0.67
RN7SKP229-201ENST00000410465 PLB1Q6P1J6 1458 aa10.84□□□□□ -0.67
RN7SKP229-201ENST00000410465 TTBK1Q5TCY1 1321 aaPredicted RBP10.84□□□□□ -0.67
RN7SKP229-201ENST00000410465 PCF11O94913 1555 aaKnown RBP10.83□□□□□ -0.68
RN7SKP229-201ENST00000410465 KIF21BO75037 1637 aa10.83□□□□□ -0.68
RN7SKP229-201ENST00000410465 MAP3K4Q9Y6R4 1608 aa10.82□□□□□ -0.68
RN7SKP229-201ENST00000410465 TEX14Q8IWB6 1497 aa10.81□□□□□ -0.68
RN7SKP229-201ENST00000410465 ABCC2Q92887 1545 aa10.81□□□□□ -0.68
RN7SKP229-201ENST00000410465 HSPA2P54652 639 aa10.81□□□□□ -0.68
RN7SKP229-201ENST00000410465 EPRSP07814 1512 aaKnown RBP10.8□□□□□ -0.68
RN7SKP229-201ENST00000410465 ERICH3Q5RHP9 1530 aa10.8□□□□□ -0.68
RN7SKP229-201ENST00000410465 PTPRGP23470 1445 aa10.79□□□□□ -0.68
RN7SKP229-201ENST00000410465 WRNQ14191 1432 aaPredicted RBP eCLIP10.78□□□□□ -0.68
RN7SKP229-201ENST00000410465 CUL7Q14999 1698 aa10.78□□□□□ -0.68
RN7SKP229-201ENST00000410465 ADAMTSL3P82987 1691 aa10.76□□□□□ -0.69
RN7SKP229-201ENST00000410465 KIAA0586Q9BVV6 1533 aa10.72□□□□□ -0.69
RN7SKP229-201ENST00000410465 MADDQ8WXG6 1647 aa10.69□□□□□ -0.7
RN7SKP229-201ENST00000410465 UHRF1BP1LA0JNW5 1464 aa10.69□□□□□ -0.7
RN7SKP229-201ENST00000410465 TNIKQ9UKE5 1360 aa10.69□□□□□ -0.7
RN7SKP229-201ENST00000410465 PLPPR3Q6T4P5 718 aa10.68□□□□□ -0.7
RN7SKP229-201ENST00000410465 UACAQ9BZF9 1416 aa10.67□□□□□ -0.7
RN7SKP229-201ENST00000410465 KDM5BQ9UGL1 1544 aa10.67□□□□□ -0.7
RN7SKP229-201ENST00000410465 MAGI3Q5TCQ9 1506 aa10.66□□□□□ -0.7
RN7SKP229-201ENST00000410465 BCORL1Q5H9F3 1711 aa10.66□□□□□ -0.7
RN7SKP229-201ENST00000410465 CD109Q6YHK3 1445 aa10.66□□□□□ -0.7
RN7SKP229-201ENST00000410465 ZCCHC11Q5TAX3 1644 aaKnown RBP10.65□□□□□ -0.7
RN7SKP229-201ENST00000410465 RIMS1Q86UR5 1692 aaKnown RBP10.63□□□□□ -0.71
RN7SKP229-201ENST00000410465 ARID4BQ4LE39 1312 aaPredicted RBP10.63□□□□□ -0.71
RN7SKP229-201ENST00000410465 CARMIL2Q6F5E8 1435 aa10.63□□□□□ -0.71
RN7SKP229-201ENST00000410465 BIVM-ERCC5R4GMW8 1640 aa10.62□□□□□ -0.71
RN7SKP229-201ENST00000410465 WDR7Q9Y4E6 1490 aa10.62□□□□□ -0.71
RN7SKP229-201ENST00000410465 KCNH8Q96L42 1107 aa10.62□□□□□ -0.71
RN7SKP229-201ENST00000410465 CFAP43Q8NDM7 1665 aa10.6□□□□□ -0.71
RN7SKP229-201ENST00000410465 ARAP3Q8WWN8 1544 aa10.59□□□□□ -0.71
RN7SKP229-201ENST00000410465 RAPGEF3O95398 923 aa10.58□□□□□ -0.72
RN7SKP229-201ENST00000410465 YEATS2Q9ULM3 1422 aa10.55□□□□□ -0.72
RN7SKP229-201ENST00000410465 STRCQ7RTU9 1775 aa10.54□□□□□ -0.72
RN7SKP229-201ENST00000410465 IGF1RP08069 1367 aa10.54□□□□□ -0.72
RN7SKP229-201ENST00000410465 DISP1Q96F81 1524 aa10.54□□□□□ -0.72
RN7SKP229-201ENST00000410465 DMRT2Q9Y5R5 561 aa10.53□□□□□ -0.72
RN7SKP229-201ENST00000410465 LTBP4Q8N2S1 1624 aa10.51□□□□□ -0.73
RN7SKP229-201ENST00000410465 IQGAP2Q13576 1575 aa10.5□□□□□ -0.73
RN7SKP229-201ENST00000410465 MED1Q15648 1581 aaPredicted RBP10.5□□□□□ -0.73
RN7SKP229-201ENST00000410465 FRMPD1Q5SYB0 1578 aa10.48□□□□□ -0.73
RN7SKP229-201ENST00000410465 IQSEC2Q5JU85 1478 aa10.48□□□□□ -0.73
RN7SKP229-201ENST00000410465 UBAP1LF5GYI3 381 aa10.47□□□□□ -0.73
RN7SKP229-201ENST00000410465 MLECQ14165 292 aa10.47□□□□□ -0.73
RN7SKP229-201ENST00000410465 CEBPAP49715 358 aaPredicted RBP10.46□□□□□ -0.73
RN7SKP229-201ENST00000410465 PHLDB1Q86UU1 1377 aa10.46□□□□□ -0.74
RN7SKP229-201ENST00000410465 PTPRTO14522 1441 aa10.46□□□□□ -0.74
RN7SKP229-201ENST00000410465 PREX1Q8TCU6 1659 aa10.46□□□□□ -0.74
RN7SKP229-201ENST00000410465 SIGLEC1Q9BZZ2 1709 aa10.45□□□□□ -0.74
RN7SKP229-201ENST00000410465 ARHGEF40Q8TER5 1519 aa10.45□□□□□ -0.74
RN7SKP229-201ENST00000410465 CARMIL1Q5VZK9 1371 aa10.44□□□□□ -0.74
RN7SKP229-201ENST00000410465 KIAA0556O60303 1618 aa10.44□□□□□ -0.74
RN7SKP229-201ENST00000410465 TTC37Q6PGP7 1564 aa10.43□□□□□ -0.74
RN7SKP229-201ENST00000410465 POGZQ7Z3K3 1410 aa10.43□□□□□ -0.74
RN7SKP229-201ENST00000410465 FER1L4A9Z1Z3 1794 aa10.43□□□□□ -0.74
RN7SKP229-201ENST00000410465 HSPA1LP34931 641 aa10.42□□□□□ -0.74
RN7SKP229-201ENST00000410465 PHF23Q9BUL5 403 aaPredicted RBP10.42□□□□□ -0.74
RN7SKP229-201ENST00000410465 UGGT2Q9NYU1 1516 aa10.42□□□□□ -0.74
RN7SKP229-201ENST00000410465 FANCAO15360 1455 aa10.42□□□□□ -0.74
RN7SKP229-201ENST00000410465 NEO1Q92859 1461 aa10.41□□□□□ -0.74
RN7SKP229-201ENST00000410465 KIF27Q86VH2 1401 aa10.41□□□□□ -0.74
RN7SKP229-201ENST00000410465 ARID3CA6NKF2 412 aa10.4□□□□□ -0.74
RN7SKP229-201ENST00000410465 ABCA9Q8IUA7 1624 aa10.39□□□□□ -0.75
RN7SKP229-201ENST00000410465 UHRF1BP1Q6BDS2 1440 aa10.39□□□□□ -0.75
RN7SKP229-201ENST00000410465 ABCA8O94911 1581 aa10.39□□□□□ -0.75
RN7SKP229-201ENST00000410465 AKNAQ7Z591 1439 aa10.38□□□□□ -0.75
RN7SKP229-201ENST00000410465 SETD1BQ9UPS6 1966 aaKnown RBP10.37□□□□□ -0.75
RN7SKP229-201ENST00000410465 ZNF335Q9H4Z2 1342 aaPredicted RBP10.36□□□□□ -0.75
RN7SKP229-201ENST00000410465 SCAF1Q9H7N4 1312 aaKnown RBP10.36□□□□□ -0.75
RN7SKP229-201ENST00000410465 RICTORQ6R327 1708 aa10.36□□□□□ -0.75
RN7SKP229-201ENST00000410465 DENND4BO75064 1496 aaPredicted RBP10.36□□□□□ -0.75
RN7SKP229-201ENST00000410465 ARHGEF12Q9NZN5 1544 aa10.34□□□□□ -0.75
RN7SKP229-201ENST00000410465 PIP4K2BP78356 416 aa10.34□□□□□ -0.75
RN7SKP229-201ENST00000410465 FHOD3Q2V2M9 1422 aa10.33□□□□□ -0.76
RN7SKP229-201ENST00000410465 ZFYVE16Q7Z3T8 1539 aa10.33□□□□□ -0.76
RN7SKP229-201ENST00000410465 ATP10BO94823 1461 aa10.32□□□□□ -0.76
RN7SKP229-201ENST00000410465 NCOA1Q15788 1441 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms