RNA–Protein interactions for RNA: ENST00000409825.5

TTC7A-204, Transcript of tetratricopeptide repeat domain 7A, humanhuman

TSL 1 (best)

Gene TTC7A, Length 4,739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC7A-204ENST00000409825 NEFMP07197 916 aa20.97■□□□□ 0.95
TTC7A-204ENST00000409825 TONSLQ96HA7 1378 aa20.96■□□□□ 0.95
TTC7A-204ENST00000409825 OSCARQ8IYS5 282 aa20.95■□□□□ 0.94
TTC7A-204ENST00000409825 PPP1R15AO75807 674 aaPredicted RBP20.92■□□□□ 0.94
TTC7A-204ENST00000409825 CCNB3Q8WWL7 1395 aa20.89■□□□□ 0.93
TTC7A-204ENST00000409825 RRP7BPQ9NSQ0 103 aa20.87■□□□□ 0.93
TTC7A-204ENST00000409825 JPH4Q96JJ6 628 aa20.85■□□□□ 0.93
TTC7A-204ENST00000409825 ANP32CO43423 234 aa20.84■□□□□ 0.93
TTC7A-204ENST00000409825 FMN1Q68DA7 1419 aa20.76■□□□□ 0.91
TTC7A-204ENST00000409825 EFCAB2Q5VUJ9 269 aa20.76■□□□□ 0.91
TTC7A-204ENST00000409825 RAPGEF2Q9Y4G8 1499 aa20.76■□□□□ 0.91
TTC7A-204ENST00000409825 C14orf37Q86TY3 774 aa20.75■□□□□ 0.91
TTC7A-204ENST00000409825 CC2D2AQ9P2K1 1620 aa20.75■□□□□ 0.91
TTC7A-204ENST00000409825 SLC24A1O60721 1099 aa20.75■□□□□ 0.91
TTC7A-204ENST00000409825 DIEXFQ68CQ4 756 aaKnown RBP20.74■□□□□ 0.91
TTC7A-204ENST00000409825 KDM2AQ9Y2K7 1162 aa20.72■□□□□ 0.91
TTC7A-204ENST00000409825 ERICH6Q7L0X2 663 aa20.72■□□□□ 0.91
TTC7A-204ENST00000409825 CYB5RLQ6IPT4 315 aa20.72■□□□□ 0.91
TTC7A-204ENST00000409825 KANK1Q14678 1352 aa20.69■□□□□ 0.9
TTC7A-204ENST00000409825 MLECQ14165 292 aa20.66■□□□□ 0.9
TTC7A-204ENST00000409825 HDGFP51858 240 aaKnown RBP20.65■□□□□ 0.9
TTC7A-204ENST00000409825 GAPVD1Q14C86 1478 aa20.65■□□□□ 0.9
TTC7A-204ENST00000409825 HMGXB3Q12766 1538 aa20.64■□□□□ 0.89
TTC7A-204ENST00000409825 PTPRGP23470 1445 aa20.63■□□□□ 0.89
TTC7A-204ENST00000409825 FGD5Q6ZNL6 1462 aa20.63■□□□□ 0.89
TTC7A-204ENST00000409825 ZNF316A6NFI3 1004 aaPredicted RBP20.62■□□□□ 0.89
TTC7A-204ENST00000409825 MRC2Q9UBG0 1479 aa20.59■□□□□ 0.89
TTC7A-204ENST00000409825 SCAF1Q9H7N4 1312 aaKnown RBP20.59■□□□□ 0.89
TTC7A-204ENST00000409825 RGL3Q3MIN7 710 aa20.59■□□□□ 0.89
TTC7A-204ENST00000409825 CFTRP13569 1480 aa20.58■□□□□ 0.88
TTC7A-204ENST00000409825 VPS8Q8N3P4 1428 aa20.55■□□□□ 0.88
TTC7A-204ENST00000409825 GGT6Q6P531 493 aa20.55■□□□□ 0.88
TTC7A-204ENST00000409825 DNAJC5BQ9UF47 199 aa20.55■□□□□ 0.88
TTC7A-204ENST00000409825 RSPH4AQ5TD94 716 aa20.53■□□□□ 0.88
TTC7A-204ENST00000409825 ZBTB47Q9UFB7 747 aaPredicted RBP20.53■□□□□ 0.88
TTC7A-204ENST00000409825 RAD54L2Q9Y4B4 1467 aa20.51■□□□□ 0.87
TTC7A-204ENST00000409825 SENP3Q9H4L4 574 aaPredicted RBP20.5■□□□□ 0.87
TTC7A-204ENST00000409825 ARHGAP35Q9NRY4 1499 aa20.49■□□□□ 0.87
TTC7A-204ENST00000409825 NESP48681 1621 aa20.49■□□□□ 0.87
TTC7A-204ENST00000409825 GRIN2BQ13224 1484 aa20.49■□□□□ 0.87
TTC7A-204ENST00000409825 AQRO60306 1485 aaKnown RBP eCLIP20.48■□□□□ 0.871e-6■■■■□ 20.8
TTC7A-204ENST00000409825 HAP1P54257 671 aaPredicted RBP20.48■□□□□ 0.87
TTC7A-204ENST00000409825 DAXXQ9UER7 740 aaPredicted RBP20.48■□□□□ 0.87
TTC7A-204ENST00000409825 IFT140Q96RY7 1462 aa20.48■□□□□ 0.87
TTC7A-204ENST00000409825 BICRAQ9NZM4 1560 aa20.47■□□□□ 0.87
TTC7A-204ENST00000409825 CDCA8Q53HL2 280 aa20.47■□□□□ 0.87
TTC7A-204ENST00000409825 FHOD3Q2V2M9 1422 aa20.47■□□□□ 0.87
TTC7A-204ENST00000409825 CLSPNQ9HAW4 1339 aa20.47■□□□□ 0.87
TTC7A-204ENST00000409825 CCDC18Q5T9S5 1454 aa20.45■□□□□ 0.86
TTC7A-204ENST00000409825 CANXP27824 592 aaKnown RBP20.45■□□□□ 0.86
TTC7A-204ENST00000409825 IGF1RP08069 1367 aa20.45■□□□□ 0.86
TTC7A-204ENST00000409825 EIF4G2P78344 907 aaKnown RBP eCLIP20.44■□□□□ 0.86
TTC7A-204ENST00000409825 SPAG9O60271 1321 aaKnown RBP20.43■□□□□ 0.86
TTC7A-204ENST00000409825 POGKQ9P215 609 aa20.43■□□□□ 0.86
TTC7A-204ENST00000409825 ANKRD30AQ9BXX3 1397 aa20.4■□□□□ 0.86
TTC7A-204ENST00000409825 TMC1Q8TDI8 760 aa20.39■□□□□ 0.85
TTC7A-204ENST00000409825 KIF3BO15066 747 aa20.36■□□□□ 0.85
TTC7A-204ENST00000409825 FAM69CQ0P6D2 419 aa20.36■□□□□ 0.85
TTC7A-204ENST00000409825 ZBTB7CA1YPR0 619 aa20.32■□□□□ 0.84
TTC7A-204ENST00000409825 LAMC3Q9Y6N6 1575 aa20.32■□□□□ 0.84
TTC7A-204ENST00000409825 CARD11Q9BXL7 1154 aa20.31■□□□□ 0.84
TTC7A-204ENST00000409825 TOPBP1Q92547 1522 aa20.31■□□□□ 0.84
TTC7A-204ENST00000409825 HNRNPMP52272 730 aaKnown RBP eCLIP20.31■□□□□ 0.84
TTC7A-204ENST00000409825 NPM2Q86SE8 214 aaKnown RBP20.3■□□□□ 0.84
TTC7A-204ENST00000409825 PLEKHG5O94827 1062 aa20.3■□□□□ 0.84
TTC7A-204ENST00000409825 KANK4Q5T7N3 995 aaPredicted RBP20.29■□□□□ 0.84
TTC7A-204ENST00000409825 WDR43Q15061 677 aaKnown RBP eCLIP20.29■□□□□ 0.84
TTC7A-204ENST00000409825 A0A0G2JS52 829 aa20.29■□□□□ 0.84
TTC7A-204ENST00000409825 DDX10Q13206 875 aaKnown RBP20.29■□□□□ 0.84
TTC7A-204ENST00000409825 WASHC2CQ9Y4E1 1318 aa20.28■□□□□ 0.84
TTC7A-204ENST00000409825 LMOD2Q6P5Q4 547 aa20.27■□□□□ 0.83
TTC7A-204ENST00000409825 EID1Q9Y6B2 187 aa20.26■□□□□ 0.83
TTC7A-204ENST00000409825 NUP155O75694 1391 aa20.24■□□□□ 0.83
TTC7A-204ENST00000409825 PKD2Q13563 968 aa20.24■□□□□ 0.83
TTC7A-204ENST00000409825 RUSC2Q8N2Y8 1516 aa20.22■□□□□ 0.83
TTC7A-204ENST00000409825 POLA1P09884 1462 aaPredicted RBP20.22■□□□□ 0.83
TTC7A-204ENST00000409825 DCAF11Q8TEB1 546 aa20.21■□□□□ 0.83
TTC7A-204ENST00000409825 CFAP53Q96M91 514 aa20.21■□□□□ 0.83
TTC7A-204ENST00000409825 PRG4Q92954 1404 aaPredicted RBP20.2■□□□□ 0.82
TTC7A-204ENST00000409825 KNSTRNQ9Y448 316 aa20.19■□□□□ 0.82
TTC7A-204ENST00000409825 DNMBPQ6XZF7 1577 aa20.19■□□□□ 0.82
TTC7A-204ENST00000409825 SETD5Q9C0A6 1442 aa20.18■□□□□ 0.82
TTC7A-204ENST00000409825 AEBP2Q6ZN18 517 aaPredicted RBP20.17■□□□□ 0.82
TTC7A-204ENST00000409825 TIMELESSQ9UNS1 1208 aa20.15■□□□□ 0.82
TTC7A-204ENST00000409825 SNAPC4Q5SXM2 1469 aa20.14■□□□□ 0.81
TTC7A-204ENST00000409825 FAM9BQ8IZU0 186 aa20.12■□□□□ 0.81
TTC7A-204ENST00000409825 MRS2Q9HD23 443 aa20.1■□□□□ 0.81
TTC7A-204ENST00000409825 SYNJ2O15056 1496 aa20.09■□□□□ 0.81
TTC7A-204ENST00000409825 SRPK2P78362 688 aaKnown RBP20.09■□□□□ 0.81
TTC7A-204ENST00000409825 TMF1P82094 1093 aa20.09■□□□□ 0.81
TTC7A-204ENST00000409825 SIN3AQ96ST3 1273 aa20.09■□□□□ 0.81
TTC7A-204ENST00000409825 BCL11AQ9H165 835 aa20.08■□□□□ 0.8
TTC7A-204ENST00000409825 MPHOSPH9Q99550 1183 aa20.07■□□□□ 0.8
TTC7A-204ENST00000409825 PPM1GO15355 546 aaPredicted RBP20.07■□□□□ 0.8
TTC7A-204ENST00000409825 HIRIP3Q9BW71 556 aaPredicted RBP20.07■□□□□ 0.8
TTC7A-204ENST00000409825 STK26Q9P289 416 aa20.05■□□□□ 0.8
TTC7A-204ENST00000409825 CUX1P39880 1505 aa20.05■□□□□ 0.8
TTC7A-204ENST00000409825 NUDCQ9Y266 331 aa20.05■□□□□ 0.8
TTC7A-204ENST00000409825 HNRNPUQ00839 825 aaKnown RBP eCLIP20.05■□□□□ 0.8
TTC7A-204ENST00000409825 MYT1Q01538 1121 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms