RNA–Protein interactions for RNA: ENST00000409750.5

RGPD8-203, Transcript of RANBP2-like and GRIP domain containing 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD8, Length 5,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD8-203ENST00000409750 CARMIL2Q6F5E8 1435 aa17.07■□□□□ 0.32
RGPD8-203ENST00000409750 VPS8Q8N3P4 1428 aa17.06■□□□□ 0.32
RGPD8-203ENST00000409750 CLSPNQ9HAW4 1339 aa17.05■□□□□ 0.32
RGPD8-203ENST00000409750 KCNH8Q96L42 1107 aa17.04■□□□□ 0.32
RGPD8-203ENST00000409750 CCNB3Q8WWL7 1395 aa17.03■□□□□ 0.32
RGPD8-203ENST00000409750 FMN1Q68DA7 1419 aa17.02■□□□□ 0.32
RGPD8-203ENST00000409750 RRP7BPQ9NSQ0 103 aa17.01■□□□□ 0.31
RGPD8-203ENST00000409750 RAPGEF2Q9Y4G8 1499 aa17■□□□□ 0.31
RGPD8-203ENST00000409750 ZBTB47Q9UFB7 747 aaPredicted RBP16.98■□□□□ 0.31
RGPD8-203ENST00000409750 NCAPD3P42695 1498 aa16.98■□□□□ 0.31
RGPD8-203ENST00000409750 FANCD2Q9BXW9 1451 aa16.97■□□□□ 0.31
RGPD8-203ENST00000409750 CANXP27824 592 aaKnown RBP16.96■□□□□ 0.31
RGPD8-203ENST00000409750 ARHGAP35Q9NRY4 1499 aa16.95■□□□□ 0.3
RGPD8-203ENST00000409750 EIF4G2P78344 907 aaKnown RBP eCLIP16.93■□□□□ 0.3
RGPD8-203ENST00000409750 TDRD9Q8NDG6 1382 aaKnown RBP16.93■□□□□ 0.3
RGPD8-203ENST00000409750 DDX10Q13206 875 aaKnown RBP16.89■□□□□ 0.29
RGPD8-203ENST00000409750 KDM2AQ9Y2K7 1162 aa16.88■□□□□ 0.29
RGPD8-203ENST00000409750 GTF3C3Q9Y5Q9 886 aa16.87■□□□□ 0.29
RGPD8-203ENST00000409750 CDCA8Q53HL2 280 aa16.85■□□□□ 0.29
RGPD8-203ENST00000409750 TIMELESSQ9UNS1 1208 aa16.85■□□□□ 0.29
RGPD8-203ENST00000409750 KANK1Q14678 1352 aa16.83■□□□□ 0.29
RGPD8-203ENST00000409750 TMC1Q8TDI8 760 aa16.81■□□□□ 0.28
RGPD8-203ENST00000409750 PPP1R15AO75807 674 aaPredicted RBP16.81■□□□□ 0.28
RGPD8-203ENST00000409750 HMGXB3Q12766 1538 aa16.79■□□□□ 0.28
RGPD8-203ENST00000409750 SETD5Q9C0A6 1442 aa16.79■□□□□ 0.28
RGPD8-203ENST00000409750 SLC24A1O60721 1099 aa16.78■□□□□ 0.28
RGPD8-203ENST00000409750 WDR43Q15061 677 aaKnown RBP eCLIP16.78■□□□□ 0.28
RGPD8-203ENST00000409750 RTL5Q5HYW3 569 aaPredicted RBP16.78■□□□□ 0.28
RGPD8-203ENST00000409750 HNRNPUQ00839 825 aaKnown RBP eCLIP16.77■□□□□ 0.28
RGPD8-203ENST00000409750 CCDC18Q5T9S5 1454 aa16.76■□□□□ 0.27
RGPD8-203ENST00000409750 PLPPR3Q6T4P5 718 aa16.75■□□□□ 0.27
RGPD8-203ENST00000409750 FGD5Q6ZNL6 1462 aa16.75■□□□□ 0.27
RGPD8-203ENST00000409750 FAM9BQ8IZU0 186 aa16.73■□□□□ 0.27
RGPD8-203ENST00000409750 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.73■□□□□ 0.27
RGPD8-203ENST00000409750 MRS2Q9HD23 443 aa16.73■□□□□ 0.27
RGPD8-203ENST00000409750 ARID4BQ4LE39 1312 aaPredicted RBP16.72■□□□□ 0.27
RGPD8-203ENST00000409750 GAPVD1Q14C86 1478 aa16.7■□□□□ 0.26
RGPD8-203ENST00000409750 RSPH4AQ5TD94 716 aa16.7■□□□□ 0.26
RGPD8-203ENST00000409750 FHOD3Q2V2M9 1422 aa16.7■□□□□ 0.26
RGPD8-203ENST00000409750 EFCAB2Q5VUJ9 269 aa16.7■□□□□ 0.26
RGPD8-203ENST00000409750 CARD11Q9BXL7 1154 aa16.7■□□□□ 0.26
RGPD8-203ENST00000409750 ANKRD30AQ9BXX3 1397 aa16.69■□□□□ 0.26
RGPD8-203ENST00000409750 RGL3Q3MIN7 710 aa16.69■□□□□ 0.26
RGPD8-203ENST00000409750 CFTRP13569 1480 aa16.69■□□□□ 0.26
RGPD8-203ENST00000409750 KANK4Q5T7N3 995 aaPredicted RBP16.67■□□□□ 0.26
RGPD8-203ENST00000409750 JPH4Q96JJ6 628 aa16.65■□□□□ 0.26
RGPD8-203ENST00000409750 HDGFP51858 240 aaKnown RBP16.65■□□□□ 0.26
RGPD8-203ENST00000409750 CFAP53Q96M91 514 aa16.62■□□□□ 0.25
RGPD8-203ENST00000409750 IGF1RP08069 1367 aa16.62■□□□□ 0.25
RGPD8-203ENST00000409750 KNSTRNQ9Y448 316 aa16.62■□□□□ 0.25
RGPD8-203ENST00000409750 CC2D2AQ9P2K1 1620 aa16.61■□□□□ 0.25
RGPD8-203ENST00000409750 RUSC2Q8N2Y8 1516 aa16.6■□□□□ 0.25
RGPD8-203ENST00000409750 ERICH3Q5RHP9 1530 aa16.59■□□□□ 0.25
RGPD8-203ENST00000409750 ANP32AP39687 249 aaKnown RBP16.58■□□□□ 0.24
RGPD8-203ENST00000409750 FKBP8Q14318 412 aa16.58■□□□□ 0.24
RGPD8-203ENST00000409750 SIN3AQ96ST3 1273 aa16.58■□□□□ 0.24
RGPD8-203ENST00000409750 KIF21BO75037 1637 aa16.58■□□□□ 0.24
RGPD8-203ENST00000409750 MIER1Q8N108 512 aa16.58■□□□□ 0.24
RGPD8-203ENST00000409750 MRC2Q9UBG0 1479 aa16.57■□□□□ 0.24
RGPD8-203ENST00000409750 RAB3GAP2Q9H2M9 1393 aa16.56■□□□□ 0.24
RGPD8-203ENST00000409750 PTPRGP23470 1445 aa16.56■□□□□ 0.24
RGPD8-203ENST00000409750 RAD54L2Q9Y4B4 1467 aa16.56■□□□□ 0.24
RGPD8-203ENST00000409750 HIRIP3Q9BW71 556 aaPredicted RBP16.55■□□□□ 0.24
RGPD8-203ENST00000409750 GRIN2BQ13224 1484 aa16.55■□□□□ 0.24
RGPD8-203ENST00000409750 TMF1P82094 1093 aa16.54■□□□□ 0.24
RGPD8-203ENST00000409750 POGKQ9P215 609 aa16.53■□□□□ 0.24
RGPD8-203ENST00000409750 PKD2Q13563 968 aa16.53■□□□□ 0.24
RGPD8-203ENST00000409750 C14orf37Q86TY3 774 aa16.53■□□□□ 0.24
RGPD8-203ENST00000409750 TOP2BQ02880 1626 aa16.52■□□□□ 0.24
RGPD8-203ENST00000409750 IFT140Q96RY7 1462 aa16.52■□□□□ 0.24
RGPD8-203ENST00000409750 CUX1P39880 1505 aa16.52■□□□□ 0.24
RGPD8-203ENST00000409750 DCAF11Q8TEB1 546 aa16.52■□□□□ 0.23
RGPD8-203ENST00000409750 NUP155O75694 1391 aa16.51■□□□□ 0.23
RGPD8-203ENST00000409750 BICRAQ9NZM4 1560 aa16.51■□□□□ 0.23
RGPD8-203ENST00000409750 UPF2Q9HAU5 1272 aaKnown RBP16.51■□□□□ 0.23
RGPD8-203ENST00000409750 MPHOSPH9Q99550 1183 aa16.5■□□□□ 0.23
RGPD8-203ENST00000409750 SALL2Q9Y467 1007 aaPredicted RBP16.48■□□□□ 0.23
RGPD8-203ENST00000409750 SPAG9O60271 1321 aaKnown RBP16.48■□□□□ 0.23
RGPD8-203ENST00000409750 SYNJ1O43426 1573 aa16.48■□□□□ 0.23
RGPD8-203ENST00000409750 CCDC136Q96JN2 1154 aa16.47■□□□□ 0.23
RGPD8-203ENST00000409750 NUDCQ9Y266 331 aa16.47■□□□□ 0.23
RGPD8-203ENST00000409750 TRHP20396 242 aaPredicted RBP16.46■□□□□ 0.23
RGPD8-203ENST00000409750 DNMBPQ6XZF7 1577 aa16.46■□□□□ 0.22
RGPD8-203ENST00000409750 OSCARQ8IYS5 282 aa16.45■□□□□ 0.22
RGPD8-203ENST00000409750 EFCAB5A4FU69 1503 aa16.45■□□□□ 0.22
RGPD8-203ENST00000409750 PNNQ9H307 717 aaKnown RBP16.44■□□□□ 0.22
RGPD8-203ENST00000409750 EIF3AQ14152 1382 aaKnown RBP16.44■□□□□ 0.22
RGPD8-203ENST00000409750 TOPBP1Q92547 1522 aa16.44■□□□□ 0.22
RGPD8-203ENST00000409750 GGT6Q6P531 493 aa16.43■□□□□ 0.22
RGPD8-203ENST00000409750 MYH16Q9H6N6 1097 aa16.43■□□□□ 0.22
RGPD8-203ENST00000409750 LAMC3Q9Y6N6 1575 aa16.43■□□□□ 0.22
RGPD8-203ENST00000409750 SCAF1Q9H7N4 1312 aaKnown RBP16.42■□□□□ 0.22
RGPD8-203ENST00000409750 CASKIN1Q8WXD9 1431 aa16.42■□□□□ 0.22
RGPD8-203ENST00000409750 AQRO60306 1485 aaKnown RBP eCLIP16.42■□□□□ 0.22
RGPD8-203ENST00000409750 PEG3Q9GZU2 1588 aa16.42■□□□□ 0.22
RGPD8-203ENST00000409750 HNRNPMP52272 730 aaKnown RBP eCLIP16.41■□□□□ 0.22
RGPD8-203ENST00000409750 BCL11AQ9H165 835 aa16.4■□□□□ 0.22
RGPD8-203ENST00000409750 MAPK8IP3Q9UPT6 1336 aa16.39■□□□□ 0.22
RGPD8-203ENST00000409750 CCER2I3L3R5 266 aa16.39■□□□□ 0.21
RGPD8-203ENST00000409750 MYOM3Q5VTT5 1437 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms