RNA–Protein interactions for RNA: ENST00000409598.8

SH3D19-203, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 5,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-203ENST00000409598 LOC105371045A0A1W2PR82 267 aa10.51□□□□□ -0.73
SH3D19-203ENST00000409598 DNAJC5BQ9UF47 199 aa10.51□□□□□ -0.73
SH3D19-203ENST00000409598 KANK1Q14678 1352 aa10.51□□□□□ -0.73
SH3D19-203ENST00000409598 JPH4Q96JJ6 628 aa10.51□□□□□ -0.73
SH3D19-203ENST00000409598 NCAPD3P42695 1498 aa10.5□□□□□ -0.73
SH3D19-203ENST00000409598 FOXD1Q16676 465 aa10.48□□□□□ -0.73
SH3D19-203ENST00000409598 CC2D2AQ9P2K1 1620 aa10.47□□□□□ -0.73
SH3D19-203ENST00000409598 EID1Q9Y6B2 187 aa10.46□□□□□ -0.74
SH3D19-203ENST00000409598 YTHDC1Q96MU7 727 aaKnown RBP10.45□□□□□ -0.74
SH3D19-203ENST00000409598 MRC2Q9UBG0 1479 aa10.45□□□□□ -0.74
SH3D19-203ENST00000409598 CNGB1Q14028 1251 aaPredicted RBP10.45□□□□□ -0.74
SH3D19-203ENST00000409598 NEUROD1Q13562 356 aa10.44□□□□□ -0.74
SH3D19-203ENST00000409598 CHIC2Q9UKJ5 165 aa10.44□□□□□ -0.74
SH3D19-203ENST00000409598 PTPRGP23470 1445 aa10.44□□□□□ -0.74
SH3D19-203ENST00000409598 CCNB3Q8WWL7 1395 aa10.43□□□□□ -0.74
SH3D19-203ENST00000409598 ZBTB7CA1YPR0 619 aa10.42□□□□□ -0.74
SH3D19-203ENST00000409598 LMOD2Q6P5Q4 547 aa10.42□□□□□ -0.74
SH3D19-203ENST00000409598 SENP3Q9H4L4 574 aaPredicted RBP10.42□□□□□ -0.74
SH3D19-203ENST00000409598 GGT6Q6P531 493 aa10.41□□□□□ -0.74
SH3D19-203ENST00000409598 DCAF8L1A6NGE4 600 aa10.41□□□□□ -0.74
SH3D19-203ENST00000409598 MROH2BQ7Z745 1585 aa10.4□□□□□ -0.74
SH3D19-203ENST00000409598 GOLGA3Q08378 1498 aa10.4□□□□□ -0.74
SH3D19-203ENST00000409598 ERICH6Q7L0X2 663 aa10.39□□□□□ -0.75
SH3D19-203ENST00000409598 SMARCA4P51532 1647 aa10.39□□□□□ -0.75
SH3D19-203ENST00000409598 CCDC88BA6NC98 1476 aa10.39□□□□□ -0.75
SH3D19-203ENST00000409598 PLEKHG5O94827 1062 aa10.38□□□□□ -0.75
SH3D19-203ENST00000409598 TOP2AP11388 1531 aaKnown RBP10.38□□□□□ -0.75
SH3D19-203ENST00000409598 FHAD1B1AJZ9 1412 aa10.38□□□□□ -0.75
SH3D19-203ENST00000409598 IFT140Q96RY7 1462 aa10.37□□□□□ -0.75
SH3D19-203ENST00000409598 ZBTB47Q9UFB7 747 aaPredicted RBP10.36□□□□□ -0.75
SH3D19-203ENST00000409598 PHF23Q9BUL5 403 aaPredicted RBP10.36□□□□□ -0.75
SH3D19-203ENST00000409598 POGKQ9P215 609 aa10.35□□□□□ -0.75
SH3D19-203ENST00000409598 NEFLP07196 543 aa10.35□□□□□ -0.75
SH3D19-203ENST00000409598 MEX3CQ5U5Q3 659 aaKnown RBP10.34□□□□□ -0.75
SH3D19-203ENST00000409598 RSPH4AQ5TD94 716 aa10.33□□□□□ -0.76
SH3D19-203ENST00000409598 CCDC9Q9Y3X0 531 aaKnown RBP10.31□□□□□ -0.76
SH3D19-203ENST00000409598 GAPVD1Q14C86 1478 aa10.31□□□□□ -0.76
SH3D19-203ENST00000409598 SPAG9O60271 1321 aaKnown RBP10.31□□□□□ -0.76
SH3D19-203ENST00000409598 GRIN2BQ13224 1484 aa10.3□□□□□ -0.76
SH3D19-203ENST00000409598 POGZQ7Z3K3 1410 aa10.29□□□□□ -0.76
SH3D19-203ENST00000409598 WASHC2CQ9Y4E1 1318 aa10.28□□□□□ -0.76
SH3D19-203ENST00000409598 FMN1Q68DA7 1419 aa10.28□□□□□ -0.76
SH3D19-203ENST00000409598 GTF3C3Q9Y5Q9 886 aa10.28□□□□□ -0.76
SH3D19-203ENST00000409598 HMGXB3Q12766 1538 aa10.27□□□□□ -0.77
SH3D19-203ENST00000409598 NPHP1O15259 732 aa10.26□□□□□ -0.77
SH3D19-203ENST00000409598 RRP7BPQ9NSQ0 103 aa10.26□□□□□ -0.77
SH3D19-203ENST00000409598 KDM2AQ9Y2K7 1162 aa10.26□□□□□ -0.77
SH3D19-203ENST00000409598 TONSLQ96HA7 1378 aa10.25□□□□□ -0.77
SH3D19-203ENST00000409598 CDCA8Q53HL2 280 aa10.25□□□□□ -0.77
SH3D19-203ENST00000409598 DMRT2Q9Y5R5 561 aa10.25□□□□□ -0.77
SH3D19-203ENST00000409598 KIF3BO15066 747 aa10.25□□□□□ -0.77
SH3D19-203ENST00000409598 TNIKQ9UKE5 1360 aa10.24□□□□□ -0.77
SH3D19-203ENST00000409598 AQRO60306 1485 aaKnown RBP eCLIP10.24□□□□□ -0.774e-8■■■■□ 24.4
SH3D19-203ENST00000409598 RAPGEF2Q9Y4G8 1499 aa10.24□□□□□ -0.77
SH3D19-203ENST00000409598 LAMC3Q9Y6N6 1575 aa10.22□□□□□ -0.77
SH3D19-203ENST00000409598 RGL3Q3MIN7 710 aa10.21□□□□□ -0.77
SH3D19-203ENST00000409598 NESP48681 1621 aa10.21□□□□□ -0.78
SH3D19-203ENST00000409598 DIEXFQ68CQ4 756 aaKnown RBP10.2□□□□□ -0.78
SH3D19-203ENST00000409598 TMC1Q8TDI8 760 aa10.2□□□□□ -0.78
SH3D19-203ENST00000409598 FGD5Q6ZNL6 1462 aa10.2□□□□□ -0.78
SH3D19-203ENST00000409598 PRG4Q92954 1404 aaPredicted RBP10.19□□□□□ -0.78
SH3D19-203ENST00000409598 CEP162Q5TB80 1403 aa10.19□□□□□ -0.78
SH3D19-203ENST00000409598 SF3B2Q13435 895 aaKnown RBP10.17□□□□□ -0.78
SH3D19-203ENST00000409598 WIZO95785 1651 aa10.17□□□□□ -0.78
SH3D19-203ENST00000409598 CCDC18Q5T9S5 1454 aa10.17□□□□□ -0.78
SH3D19-203ENST00000409598 CSB-PGBD3P0DP91 1061 aa10.17□□□□□ -0.78
SH3D19-203ENST00000409598 CANXP27824 592 aaKnown RBP10.17□□□□□ -0.78
SH3D19-203ENST00000409598 ARXQ96QS3 562 aa10.17□□□□□ -0.78
SH3D19-203ENST00000409598 EIF4G2P78344 907 aaKnown RBP eCLIP10.16□□□□□ -0.78
SH3D19-203ENST00000409598 CFTRP13569 1480 aa10.16□□□□□ -0.78
SH3D19-203ENST00000409598 ATF3P18847 181 aa10.15□□□□□ -0.78
SH3D19-203ENST00000409598 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.15□□□□□ -0.78
SH3D19-203ENST00000409598 ANKRD30AQ9BXX3 1397 aa10.14□□□□□ -0.79
SH3D19-203ENST00000409598 RAD54L2Q9Y4B4 1467 aa10.14□□□□□ -0.79
SH3D19-203ENST00000409598 TMX4Q9H1E5 349 aaPredicted RBP10.14□□□□□ -0.79
SH3D19-203ENST00000409598 PAK3O75914 559 aaPredicted RBP10.13□□□□□ -0.79
SH3D19-203ENST00000409598 CFAP53Q96M91 514 aa10.12□□□□□ -0.79
SH3D19-203ENST00000409598 THEMISQ8N1K5 641 aaPredicted RBP10.11□□□□□ -0.79
SH3D19-203ENST00000409598 ANP32CO43423 234 aa10.11□□□□□ -0.79
SH3D19-203ENST00000409598 HNRNPMP52272 730 aaKnown RBP eCLIP10.11□□□□□ -0.792e-7■■■□□ 16
SH3D19-203ENST00000409598 SNAPC4Q5SXM2 1469 aa10.1□□□□□ -0.79
SH3D19-203ENST00000409598 CLSPNQ9HAW4 1339 aa10.1□□□□□ -0.79
SH3D19-203ENST00000409598 SRPK2P78362 688 aaKnown RBP10.1□□□□□ -0.79
SH3D19-203ENST00000409598 SYNJ2O15056 1496 aa10.09□□□□□ -0.79
SH3D19-203ENST00000409598 SYNJ1O43426 1573 aa10.09□□□□□ -0.79
SH3D19-203ENST00000409598 DNAJC5Q9H3Z4 198 aa10.08□□□□□ -0.8
SH3D19-203ENST00000409598 TOPBP1Q92547 1522 aa10.08□□□□□ -0.8
SH3D19-203ENST00000409598 NGDNQ8NEJ9 315 aaKnown RBP10.08□□□□□ -0.8
SH3D19-203ENST00000409598 EVA1CP58658 441 aa10.07□□□□□ -0.8
SH3D19-203ENST00000409598 STK26Q9P289 416 aa10.07□□□□□ -0.8
SH3D19-203ENST00000409598 DAXXQ9UER7 740 aaPredicted RBP10.07□□□□□ -0.8
SH3D19-203ENST00000409598 HDGFL2Q7Z4V5 671 aaPredicted RBP10.07□□□□□ -0.8
SH3D19-203ENST00000409598 ANKLE2Q86XL3 938 aa10.06□□□□□ -0.8
SH3D19-203ENST00000409598 BICRAQ9NZM4 1560 aa10.06□□□□□ -0.8
SH3D19-203ENST00000409598 PPM1GO15355 546 aaPredicted RBP10.06□□□□□ -0.8
SH3D19-203ENST00000409598 HMGB2P26583 209 aaKnown RBP10.05□□□□□ -0.8
SH3D19-203ENST00000409598 WDR43Q15061 677 aaKnown RBP eCLIP10.05□□□□□ -0.8
SH3D19-203ENST00000409598 MAGI1Q96QZ7 1491 aaPredicted RBP10.05□□□□□ -0.8
SH3D19-203ENST00000409598 PROSER2Q86WR7 435 aaPredicted RBP10.04□□□□□ -0.8
SH3D19-203ENST00000409598 NUDCQ9Y266 331 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms