RNA–Protein interactions for RNA: ENST00000409469.5

CUL1-202, Transcript of cullin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL1, Length 2,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL1-202ENST00000409469 AQRO60306 1485 aaKnown RBP eCLIP15.16■□□□□ 0.023e-7■■■■■ 27.1
CUL1-202ENST00000409469 MRC2Q9UBG0 1479 aa15.14■□□□□ 0.01
CUL1-202ENST00000409469 ABCA5Q8WWZ7 1642 aa15.14■□□□□ 0.01
CUL1-202ENST00000409469 TARBP1Q13395 1621 aaKnown RBP15.13■□□□□ 0.01
CUL1-202ENST00000409469 FHOD3Q2V2M9 1422 aa15.12■□□□□ 0.01
CUL1-202ENST00000409469 ERCC6Q03468 1493 aa15.11■□□□□ 0.01
CUL1-202ENST00000409469 ZNF608Q9ULD9 1512 aaPredicted RBP15.1■□□□□ 0.01
CUL1-202ENST00000409469 CUL7Q14999 1698 aa15.1■□□□□ 0.01
CUL1-202ENST00000409469 ZEB1P37275 1124 aaPredicted RBP15.07■□□□□ 0
CUL1-202ENST00000409469 ITGAEP38570 1179 aa15.03■□□□□ -0
CUL1-202ENST00000409469 CTTNBP2Q8WZ74 1663 aa15.03■□□□□ -0
CUL1-202ENST00000409469 PCF11O94913 1555 aaKnown RBP15.02■□□□□ -0
CUL1-202ENST00000409469 WDR62O43379 1518 aa15.02□□□□□ -0.01
CUL1-202ENST00000409469 PBRM1Q86U86 1689 aa15.02□□□□□ -0.01
CUL1-202ENST00000409469 PLPPR3Q6T4P5 718 aa15□□□□□ -0.01
CUL1-202ENST00000409469 TIAM1Q13009 1591 aa14.97□□□□□ -0.01
CUL1-202ENST00000409469 IFT140Q96RY7 1462 aa14.97□□□□□ -0.01
CUL1-202ENST00000409469 ARID3CA6NKF2 412 aa14.96□□□□□ -0.01
CUL1-202ENST00000409469 ERICH6Q7L0X2 663 aa14.96□□□□□ -0.01
CUL1-202ENST00000409469 FHAD1B1AJZ9 1412 aa14.96□□□□□ -0.02
CUL1-202ENST00000409469 GRIN2BQ13224 1484 aa14.95□□□□□ -0.02
CUL1-202ENST00000409469 THOC2Q8NI27 1593 aaKnown RBP14.95□□□□□ -0.02
CUL1-202ENST00000409469 ADAMTS12P58397 1594 aa14.95□□□□□ -0.02
CUL1-202ENST00000409469 FBLN2P98095 1184 aa14.95□□□□□ -0.02
CUL1-202ENST00000409469 SNAPC4Q5SXM2 1469 aa14.94□□□□□ -0.02
CUL1-202ENST00000409469 EIF4G3O43432 1585 aaKnown RBP14.93□□□□□ -0.02
CUL1-202ENST00000409469 EFCAB5A4FU69 1503 aa14.93□□□□□ -0.02
CUL1-202ENST00000409469 LRRC9Q6ZRR7 1453 aa14.93□□□□□ -0.02
CUL1-202ENST00000409469 PHLDB1Q86UU1 1377 aa14.92□□□□□ -0.02
CUL1-202ENST00000409469 CCNB3Q8WWL7 1395 aa14.9□□□□□ -0.02
CUL1-202ENST00000409469 RRBP1Q9P2E9 1410 aaKnown RBP14.89□□□□□ -0.03
CUL1-202ENST00000409469 SAMD9Q5K651 1589 aa14.89□□□□□ -0.03
CUL1-202ENST00000409469 CASKIN1Q8WXD9 1431 aa14.88□□□□□ -0.03
CUL1-202ENST00000409469 FAM50AQ14320 339 aaKnown RBP14.88□□□□□ -0.03
CUL1-202ENST00000409469 FYCO1Q9BQS8 1478 aa14.87□□□□□ -0.03
CUL1-202ENST00000409469 FMN1Q68DA7 1419 aa14.87□□□□□ -0.03
CUL1-202ENST00000409469 IQGAP2Q13576 1575 aa14.86□□□□□ -0.03
CUL1-202ENST00000409469 CFAP43Q8NDM7 1665 aa14.86□□□□□ -0.03
CUL1-202ENST00000409469 CHMP7Q8WUX9 453 aaPredicted RBP14.85□□□□□ -0.03
CUL1-202ENST00000409469 LRRIQ1Q96JM4 1722 aa14.84□□□□□ -0.03
CUL1-202ENST00000409469 MAP3K1Q13233 1512 aa14.83□□□□□ -0.04
CUL1-202ENST00000409469 GRIN2AQ12879 1464 aa14.82□□□□□ -0.04
CUL1-202ENST00000409469 MTUS2Q5JR59 1369 aa14.81□□□□□ -0.04
CUL1-202ENST00000409469 CDK13Q14004 1512 aaKnown RBP14.76□□□□□ -0.05
CUL1-202ENST00000409469 DHX57Q6P158 1386 aaKnown RBP14.76□□□□□ -0.05
CUL1-202ENST00000409469 MAGI3Q5TCQ9 1506 aa14.76□□□□□ -0.05
CUL1-202ENST00000409469 CEP170Q5SW79 1584 aa14.76□□□□□ -0.05
CUL1-202ENST00000409469 KIAA0586Q9BVV6 1533 aa14.75□□□□□ -0.05
CUL1-202ENST00000409469 DISP1Q96F81 1524 aa14.75□□□□□ -0.05
CUL1-202ENST00000409469 SYNJ2O15056 1496 aa14.74□□□□□ -0.05
CUL1-202ENST00000409469 MAGI1Q96QZ7 1491 aaPredicted RBP14.74□□□□□ -0.05
CUL1-202ENST00000409469 RAB3GAP2Q9H2M9 1393 aa14.73□□□□□ -0.05
CUL1-202ENST00000409469 RTN4Q9NQC3 1192 aaKnown RBP14.73□□□□□ -0.05
CUL1-202ENST00000409469 UGGT2Q9NYU1 1516 aa14.72□□□□□ -0.05
CUL1-202ENST00000409469 NCOA2Q15596 1464 aa14.71□□□□□ -0.05
CUL1-202ENST00000409469 KIAA0556O60303 1618 aa14.71□□□□□ -0.05
CUL1-202ENST00000409469 EPRSP07814 1512 aaKnown RBP14.7□□□□□ -0.06
CUL1-202ENST00000409469 FGD6Q6ZV73 1430 aa14.7□□□□□ -0.06
CUL1-202ENST00000409469 JPH4Q96JJ6 628 aa14.68□□□□□ -0.06
CUL1-202ENST00000409469 HECW1Q76N89 1606 aa14.68□□□□□ -0.06
CUL1-202ENST00000409469 PLB1Q6P1J6 1458 aa14.66□□□□□ -0.06
CUL1-202ENST00000409469 PTPRKQ15262 1439 aa14.65□□□□□ -0.06
CUL1-202ENST00000409469 SETD5Q9C0A6 1442 aa14.65□□□□□ -0.06
CUL1-202ENST00000409469 EHBP1L1Q8N3D4 1523 aa14.65□□□□□ -0.06
CUL1-202ENST00000409469 CHIC2Q9UKJ5 165 aa14.64□□□□□ -0.07
CUL1-202ENST00000409469 NUP160Q12769 1436 aa14.64□□□□□ -0.07
CUL1-202ENST00000409469 MYOM3Q5VTT5 1437 aa14.64□□□□□ -0.07
CUL1-202ENST00000409469 NUP153P49790 1475 aaKnown RBP14.64□□□□□ -0.07
CUL1-202ENST00000409469 CCDC18Q5T9S5 1454 aa14.64□□□□□ -0.07
CUL1-202ENST00000409469 SUPT6HQ7KZ85 1726 aaKnown RBP14.63□□□□□ -0.07
CUL1-202ENST00000409469 DIEXFQ68CQ4 756 aaKnown RBP14.6□□□□□ -0.07
CUL1-202ENST00000409469 RAPGEF6Q8TEU7 1601 aa14.59□□□□□ -0.07
CUL1-202ENST00000409469 SIN3AQ96ST3 1273 aa14.59□□□□□ -0.07
CUL1-202ENST00000409469 RRP7BPQ9NSQ0 103 aa14.59□□□□□ -0.07
CUL1-202ENST00000409469 ZNF316A6NFI3 1004 aaPredicted RBP14.58□□□□□ -0.08
CUL1-202ENST00000409469 MAPKBP1O60336 1514 aa14.58□□□□□ -0.08
CUL1-202ENST00000409469 PRG4Q92954 1404 aaPredicted RBP14.58□□□□□ -0.08
CUL1-202ENST00000409469 ZNF644Q9H582 1327 aaPredicted RBP14.58□□□□□ -0.08
CUL1-202ENST00000409469 NEUROD1Q13562 356 aa14.58□□□□□ -0.08
CUL1-202ENST00000409469 PTPN23Q9H3S7 1636 aa14.57□□□□□ -0.08
CUL1-202ENST00000409469 ARHGEF11O15085 1522 aa14.57□□□□□ -0.08
CUL1-202ENST00000409469 CHD1O14646 1710 aa14.56□□□□□ -0.08
CUL1-202ENST00000409469 CARMIL2Q6F5E8 1435 aa14.56□□□□□ -0.08
CUL1-202ENST00000409469 NCBP3Q53F19 620 aaKnown RBP14.54□□□□□ -0.08
CUL1-202ENST00000409469 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.53□□□□□ -0.085e-9■■□□□ 11.5
CUL1-202ENST00000409469 CLSPNQ9HAW4 1339 aa14.53□□□□□ -0.08
CUL1-202ENST00000409469 ZNF777Q9ULD5 760 aaPredicted RBP14.52□□□□□ -0.09
CUL1-202ENST00000409469 NAIPQ13075 1403 aa14.5□□□□□ -0.09
CUL1-202ENST00000409469 CDK11AQ9UQ88 783 aaPredicted RBP14.5□□□□□ -0.09
CUL1-202ENST00000409469 ERCC6L2Q5T890 1561 aa14.49□□□□□ -0.09
CUL1-202ENST00000409469 KIF14Q15058 1648 aa14.49□□□□□ -0.09
CUL1-202ENST00000409469 HFM1A2PYH4 1435 aa14.49□□□□□ -0.09
CUL1-202ENST00000409469 PTPRGP23470 1445 aa14.47□□□□□ -0.09
CUL1-202ENST00000409469 TCOF1Q13428 1488 aaKnown RBP14.46□□□□□ -0.09
CUL1-202ENST00000409469 TROQ12816 1431 aaPredicted RBP14.46□□□□□ -0.09
CUL1-202ENST00000409469 KDM6BO15054 1643 aa14.46□□□□□ -0.1
CUL1-202ENST00000409469 CFDP1Q9UEE9 299 aaPredicted RBP14.45□□□□□ -0.1
CUL1-202ENST00000409469 ATP10BO94823 1461 aa14.45□□□□□ -0.1
CUL1-202ENST00000409469 TRIM52Q96A61 297 aa14.44□□□□□ -0.1
CUL1-202ENST00000409469 ABCA8O94911 1581 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms