RNA–Protein interactions for RNA: ENST00000409375.1

AP1S3-204, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 3 BASIC

Gene AP1S3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-204ENST00000409375 TNIKQ9UKE5 1360 aa24.68■■□□□ 1.54
AP1S3-204ENST00000409375 KIAA0586Q9BVV6 1533 aa24.68■■□□□ 1.54
AP1S3-204ENST00000409375 LOC105371045A0A1W2PR82 267 aa24.68■■□□□ 1.54
AP1S3-204ENST00000409375 OSCARQ8IYS5 282 aa24.67■■□□□ 1.54
AP1S3-204ENST00000409375 IQGAP2Q13576 1575 aa24.64■■□□□ 1.54
AP1S3-204ENST00000409375 CLASP1Q7Z460 1538 aa24.58■■□□□ 1.53
AP1S3-204ENST00000409375 UGGT2Q9NYU1 1516 aa24.51■■□□□ 1.51
AP1S3-204ENST00000409375 JPH4Q96JJ6 628 aa24.49■■□□□ 1.51
AP1S3-204ENST00000409375 SHROOM2Q13796 1616 aa24.49■■□□□ 1.51
AP1S3-204ENST00000409375 EFCAB5A4FU69 1503 aa24.47■■□□□ 1.51
AP1S3-204ENST00000409375 CEP162Q5TB80 1403 aa24.47■■□□□ 1.51
AP1S3-204ENST00000409375 CLIP1P30622 1438 aa24.46■■□□□ 1.51
AP1S3-204ENST00000409375 CARMIL2Q6F5E8 1435 aa24.46■■□□□ 1.51
AP1S3-204ENST00000409375 RANGAP1P46060 587 aaPredicted RBP24.45■■□□□ 1.5
AP1S3-204ENST00000409375 PRG4Q92954 1404 aaPredicted RBP24.42■■□□□ 1.5
AP1S3-204ENST00000409375 SAMD9Q5K651 1589 aa24.42■■□□□ 1.5
AP1S3-204ENST00000409375 KIAA0556O60303 1618 aa24.39■■□□□ 1.49
AP1S3-204ENST00000409375 ARHGAP35Q9NRY4 1499 aa24.37■■□□□ 1.49
AP1S3-204ENST00000409375 DISP1Q96F81 1524 aa24.35■■□□□ 1.49
AP1S3-204ENST00000409375 P3H3Q8IVL6 736 aa24.29■■□□□ 1.48
AP1S3-204ENST00000409375 FHOD3Q2V2M9 1422 aa24.27■■□□□ 1.48
AP1S3-204ENST00000409375 FMN1Q68DA7 1419 aa24.25■■□□□ 1.47
AP1S3-204ENST00000409375 ARAP1Q96P48 1450 aa24.24■■□□□ 1.47
AP1S3-204ENST00000409375 ARHGEF11O15085 1522 aa24.24■■□□□ 1.47
AP1S3-204ENST00000409375 ERCC6L2Q5T890 1561 aa24.24■■□□□ 1.47
AP1S3-204ENST00000409375 PTPRGP23470 1445 aa24.21■■□□□ 1.47
AP1S3-204ENST00000409375 VPS8Q8N3P4 1428 aa24.17■■□□□ 1.46
AP1S3-204ENST00000409375 RIMBP3CA6NJZ7 1639 aa24.17■■□□□ 1.46
AP1S3-204ENST00000409375 RIMBP3BA6NNM3 1639 aa24.17■■□□□ 1.46
AP1S3-204ENST00000409375 RIMBP3Q9UFD9 1639 aa24.17■■□□□ 1.46
AP1S3-204ENST00000409375 TTBK1Q5TCY1 1321 aaPredicted RBP24.16■■□□□ 1.46
AP1S3-204ENST00000409375 RAPGEF6Q8TEU7 1601 aa24.09■■□□□ 1.45
AP1S3-204ENST00000409375 FYCO1Q9BQS8 1478 aa24.08■■□□□ 1.45
AP1S3-204ENST00000409375 CASKIN1Q8WXD9 1431 aa24.08■■□□□ 1.44
AP1S3-204ENST00000409375 UACAQ9BZF9 1416 aa24.07■■□□□ 1.44
AP1S3-204ENST00000409375 HECW1Q76N89 1606 aa24.06■■□□□ 1.44
AP1S3-204ENST00000409375 DNAJC5Q9H3Z4 198 aa24.06■■□□□ 1.44
AP1S3-204ENST00000409375 ABCA8O94911 1581 aa24.06■■□□□ 1.44
AP1S3-204ENST00000409375 PCF11O94913 1555 aaKnown RBP24.06■■□□□ 1.44
AP1S3-204ENST00000409375 PLB1Q6P1J6 1458 aa24.04■■□□□ 1.44
AP1S3-204ENST00000409375 ABCC2Q92887 1545 aa24.02■■□□□ 1.44
AP1S3-204ENST00000409375 ATP1B4Q9UN42 357 aaPredicted RBP24.02■■□□□ 1.44
AP1S3-204ENST00000409375 UHRF1BP1LA0JNW5 1464 aa24.01■■□□□ 1.43
AP1S3-204ENST00000409375 APLP2Q06481 763 aa24■■□□□ 1.43
AP1S3-204ENST00000409375 CCDC18Q5T9S5 1454 aa23.98■■□□□ 1.43
AP1S3-204ENST00000409375 CYB5RLQ6IPT4 315 aa23.97■■□□□ 1.43
AP1S3-204ENST00000409375 NUP153P49790 1475 aaKnown RBP23.95■■□□□ 1.42
AP1S3-204ENST00000409375 ADCY10Q96PN6 1610 aa23.93■■□□□ 1.42
AP1S3-204ENST00000409375 EPRSP07814 1512 aaKnown RBP23.92■■□□□ 1.42
AP1S3-204ENST00000409375 NPM1P06748 294 aaKnown RBP eCLIP23.91■■□□□ 1.42
AP1S3-204ENST00000409375 MAP3K1Q13233 1512 aa23.89■■□□□ 1.42
AP1S3-204ENST00000409375 KDM5BQ9UGL1 1544 aa23.89■■□□□ 1.41
AP1S3-204ENST00000409375 LRRIQ1Q96JM4 1722 aa23.88■■□□□ 1.41
AP1S3-204ENST00000409375 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.88■■□□□ 1.41
AP1S3-204ENST00000409375 HNRNPUL2Q1KMD3 747 aaKnown RBP23.88■■□□□ 1.41
AP1S3-204ENST00000409375 CFAP43Q8NDM7 1665 aa23.87■■□□□ 1.41
AP1S3-204ENST00000409375 CDK11AQ9UQ88 783 aaPredicted RBP23.87■■□□□ 1.41
AP1S3-204ENST00000409375 TIAM1Q13009 1591 aa23.86■■□□□ 1.41
AP1S3-204ENST00000409375 ATP10BO94823 1461 aa23.85■■□□□ 1.41
AP1S3-204ENST00000409375 CDK13Q14004 1512 aaKnown RBP23.84■■□□□ 1.41
AP1S3-204ENST00000409375 ZCCHC11Q5TAX3 1644 aaKnown RBP23.84■■□□□ 1.41
AP1S3-204ENST00000409375 ARID3CA6NKF2 412 aa23.83■■□□□ 1.41
AP1S3-204ENST00000409375 PLEKHD1A6NEE1 506 aa23.77■■□□□ 1.4
AP1S3-204ENST00000409375 MTUS2Q5JR59 1369 aa23.77■■□□□ 1.4
AP1S3-204ENST00000409375 EHBP1L1Q8N3D4 1523 aa23.74■■□□□ 1.39
AP1S3-204ENST00000409375 LRRC9Q6ZRR7 1453 aa23.74■■□□□ 1.39
AP1S3-204ENST00000409375 MAPKBP1O60336 1514 aa23.71■■□□□ 1.39
AP1S3-204ENST00000409375 TROQ12816 1431 aaPredicted RBP23.71■■□□□ 1.39
AP1S3-204ENST00000409375 WDR7Q9Y4E6 1490 aa23.69■■□□□ 1.38
AP1S3-204ENST00000409375 ASXL2Q76L83 1435 aa23.69■■□□□ 1.38
AP1S3-204ENST00000409375 SUPT6HQ7KZ85 1726 aaKnown RBP23.66■■□□□ 1.38
AP1S3-204ENST00000409375 KIF14Q15058 1648 aa23.66■■□□□ 1.38
AP1S3-204ENST00000409375 MAGI3Q5TCQ9 1506 aa23.65■■□□□ 1.38
AP1S3-204ENST00000409375 KANK4Q5T7N3 995 aaPredicted RBP23.65■■□□□ 1.38
AP1S3-204ENST00000409375 KCNH8Q96L42 1107 aa23.57■■□□□ 1.36
AP1S3-204ENST00000409375 PPARGC1BQ86YN6 1023 aaKnown RBP23.56■■□□□ 1.36
AP1S3-204ENST00000409375 NCOA2Q15596 1464 aa23.56■■□□□ 1.36
AP1S3-204ENST00000409375 CCNB3Q8WWL7 1395 aa23.52■■□□□ 1.36
AP1S3-204ENST00000409375 ABCC10Q5T3U5 1492 aa23.5■■□□□ 1.35
AP1S3-204ENST00000409375 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.5■■□□□ 1.35
AP1S3-204ENST00000409375 ABCA9Q8IUA7 1624 aa23.5■■□□□ 1.35
AP1S3-204ENST00000409375 ITSN2Q9NZM3 1697 aa23.5■■□□□ 1.35
AP1S3-204ENST00000409375 GLI2P10070 1586 aa23.49■■□□□ 1.35
AP1S3-204ENST00000409375 DIP2BQ9P265 1576 aa23.48■■□□□ 1.35
AP1S3-204ENST00000409375 TTC37Q6PGP7 1564 aa23.47■■□□□ 1.35
AP1S3-204ENST00000409375 MYO5CQ9NQX4 1742 aa23.47■■□□□ 1.35
AP1S3-204ENST00000409375 MYOM3Q5VTT5 1437 aa23.45■■□□□ 1.34
AP1S3-204ENST00000409375 FAM69CQ0P6D2 419 aa23.44■■□□□ 1.34
AP1S3-204ENST00000409375 PHLDB1Q86UU1 1377 aa23.42■■□□□ 1.34
AP1S3-204ENST00000409375 PREX2Q70Z35 1606 aa23.42■■□□□ 1.34
AP1S3-204ENST00000409375 CDC42BPAQ5VT25 1732 aa23.42■■□□□ 1.34
AP1S3-204ENST00000409375 ARAP3Q8WWN8 1544 aa23.41■■□□□ 1.34
AP1S3-204ENST00000409375 GPATCH8Q9UKJ3 1502 aaKnown RBP23.41■■□□□ 1.34
AP1S3-204ENST00000409375 CD109Q6YHK3 1445 aa23.41■■□□□ 1.34
AP1S3-204ENST00000409375 MIA2Q96PC5 1412 aa23.4■■□□□ 1.34
AP1S3-204ENST00000409375 MAP3K4Q9Y6R4 1608 aa23.4■■□□□ 1.34
AP1S3-204ENST00000409375 KIF13AQ9H1H9 1805 aa23.39■■□□□ 1.33
AP1S3-204ENST00000409375 CFDP1Q9UEE9 299 aaPredicted RBP23.39■■□□□ 1.33
AP1S3-204ENST00000409375 PLCH2O75038 1416 aa23.39■■□□□ 1.33
AP1S3-204ENST00000409375 FGD6Q6ZV73 1430 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms