RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 NUP160Q12769 1436 aa23.03■■□□□ 1.28
CHRNA1-204ENST00000409323 RANGAP1P46060 587 aaPredicted RBP23.01■■□□□ 1.27
CHRNA1-204ENST00000409323 CTTNBP2Q8WZ74 1663 aa22.99■■□□□ 1.27
CHRNA1-204ENST00000409323 CLASP1Q7Z460 1538 aa22.94■■□□□ 1.26
CHRNA1-204ENST00000409323 KIAA0586Q9BVV6 1533 aa22.92■■□□□ 1.26
CHRNA1-204ENST00000409323 IQGAP2Q13576 1575 aa22.91■■□□□ 1.26
CHRNA1-204ENST00000409323 JPH4Q96JJ6 628 aa22.85■■□□□ 1.25
CHRNA1-204ENST00000409323 TNIKQ9UKE5 1360 aa22.83■■□□□ 1.25
CHRNA1-204ENST00000409323 ERCC6L2Q5T890 1561 aa22.81■■□□□ 1.24
CHRNA1-204ENST00000409323 SHROOM2Q13796 1616 aa22.8■■□□□ 1.24
CHRNA1-204ENST00000409323 P3H3Q8IVL6 736 aa22.8■■□□□ 1.24
CHRNA1-204ENST00000409323 PRG4Q92954 1404 aaPredicted RBP22.79■■□□□ 1.24
CHRNA1-204ENST00000409323 TTBK1Q5TCY1 1321 aaPredicted RBP22.77■■□□□ 1.24
CHRNA1-204ENST00000409323 UGGT2Q9NYU1 1516 aa22.75■■□□□ 1.23
CHRNA1-204ENST00000409323 DISP1Q96F81 1524 aa22.73■■□□□ 1.23
CHRNA1-204ENST00000409323 CEP162Q5TB80 1403 aa22.72■■□□□ 1.23
CHRNA1-204ENST00000409323 KIAA0556O60303 1618 aa22.7■■□□□ 1.22
CHRNA1-204ENST00000409323 ARHGEF11O15085 1522 aa22.7■■□□□ 1.22
CHRNA1-204ENST00000409323 CLIP1P30622 1438 aa22.69■■□□□ 1.22
CHRNA1-204ENST00000409323 RIMBP3CA6NJZ7 1639 aa22.68■■□□□ 1.22
CHRNA1-204ENST00000409323 RIMBP3BA6NNM3 1639 aa22.68■■□□□ 1.22
CHRNA1-204ENST00000409323 RIMBP3Q9UFD9 1639 aa22.68■■□□□ 1.22
CHRNA1-204ENST00000409323 SAMD9Q5K651 1589 aa22.67■■□□□ 1.22
CHRNA1-204ENST00000409323 ARHGAP35Q9NRY4 1499 aa22.67■■□□□ 1.22
CHRNA1-204ENST00000409323 FHOD3Q2V2M9 1422 aa22.67■■□□□ 1.22
CHRNA1-204ENST00000409323 CARMIL2Q6F5E8 1435 aa22.66■■□□□ 1.22
CHRNA1-204ENST00000409323 DNAJC5Q9H3Z4 198 aa22.63■■□□□ 1.21
CHRNA1-204ENST00000409323 EFCAB5A4FU69 1503 aa22.62■■□□□ 1.21
CHRNA1-204ENST00000409323 ARAP1Q96P48 1450 aa22.59■■□□□ 1.21
CHRNA1-204ENST00000409323 PTPRGP23470 1445 aa22.55■■□□□ 1.2
CHRNA1-204ENST00000409323 CYB5RLQ6IPT4 315 aa22.54■■□□□ 1.2
CHRNA1-204ENST00000409323 PLB1Q6P1J6 1458 aa22.48■■□□□ 1.19
CHRNA1-204ENST00000409323 ARID3CA6NKF2 412 aa22.47■■□□□ 1.19
CHRNA1-204ENST00000409323 ATP1B4Q9UN42 357 aaPredicted RBP22.46■■□□□ 1.19
CHRNA1-204ENST00000409323 PCF11O94913 1555 aaKnown RBP22.42■■□□□ 1.18
CHRNA1-204ENST00000409323 FMN1Q68DA7 1419 aa22.42■■□□□ 1.18
CHRNA1-204ENST00000409323 RAPGEF6Q8TEU7 1601 aa22.4■■□□□ 1.18
CHRNA1-204ENST00000409323 ABCA8O94911 1581 aa22.4■■□□□ 1.18
CHRNA1-204ENST00000409323 UACAQ9BZF9 1416 aa22.4■■□□□ 1.18
CHRNA1-204ENST00000409323 ADCY10Q96PN6 1610 aa22.39■■□□□ 1.17
CHRNA1-204ENST00000409323 VPS8Q8N3P4 1428 aa22.37■■□□□ 1.17
CHRNA1-204ENST00000409323 ABCC2Q92887 1545 aa22.35■■□□□ 1.17
CHRNA1-204ENST00000409323 LRRIQ1Q96JM4 1722 aa22.33■■□□□ 1.17
CHRNA1-204ENST00000409323 NUP153P49790 1475 aaKnown RBP22.32■■□□□ 1.16
CHRNA1-204ENST00000409323 CASKIN1Q8WXD9 1431 aa22.32■■□□□ 1.16
CHRNA1-204ENST00000409323 HECW1Q76N89 1606 aa22.3■■□□□ 1.16
CHRNA1-204ENST00000409323 CDK13Q14004 1512 aaKnown RBP22.29■■□□□ 1.16
CHRNA1-204ENST00000409323 FYCO1Q9BQS8 1478 aa22.29■■□□□ 1.16
CHRNA1-204ENST00000409323 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.29■■□□□ 1.16
CHRNA1-204ENST00000409323 HNRNPUL2Q1KMD3 747 aaKnown RBP22.29■■□□□ 1.16
CHRNA1-204ENST00000409323 UHRF1BP1LA0JNW5 1464 aa22.28■■□□□ 1.16
CHRNA1-204ENST00000409323 ZCCHC11Q5TAX3 1644 aaKnown RBP22.26■■□□□ 1.15
CHRNA1-204ENST00000409323 ATP10BO94823 1461 aa22.25■■□□□ 1.15
CHRNA1-204ENST00000409323 EPRSP07814 1512 aaKnown RBP22.24■■□□□ 1.15
CHRNA1-204ENST00000409323 NPM1P06748 294 aaKnown RBP eCLIP22.21■■□□□ 1.15
CHRNA1-204ENST00000409323 KDM5BQ9UGL1 1544 aa22.21■■□□□ 1.15
CHRNA1-204ENST00000409323 PPARGC1BQ86YN6 1023 aaKnown RBP22.17■■□□□ 1.14
CHRNA1-204ENST00000409323 CCDC18Q5T9S5 1454 aa22.15■■□□□ 1.14
CHRNA1-204ENST00000409323 CFAP43Q8NDM7 1665 aa22.13■■□□□ 1.13
CHRNA1-204ENST00000409323 APLP2Q06481 763 aa22.13■■□□□ 1.13
CHRNA1-204ENST00000409323 TIAM1Q13009 1591 aa22.13■■□□□ 1.13
CHRNA1-204ENST00000409323 MAGI3Q5TCQ9 1506 aa22.13■■□□□ 1.13
CHRNA1-204ENST00000409323 ASXL2Q76L83 1435 aa22.12■■□□□ 1.13
CHRNA1-204ENST00000409323 KANK4Q5T7N3 995 aaPredicted RBP22.11■■□□□ 1.13
CHRNA1-204ENST00000409323 KCNH8Q96L42 1107 aa22.1■■□□□ 1.13
CHRNA1-204ENST00000409323 PLEKHD1A6NEE1 506 aa22.08■■□□□ 1.12
CHRNA1-204ENST00000409323 MAPKBP1O60336 1514 aa22.05■■□□□ 1.12
CHRNA1-204ENST00000409323 WDR7Q9Y4E6 1490 aa22.05■■□□□ 1.12
CHRNA1-204ENST00000409323 MTUS2Q5JR59 1369 aa22.05■■□□□ 1.12
CHRNA1-204ENST00000409323 CDK11AQ9UQ88 783 aaPredicted RBP22.04■■□□□ 1.12
CHRNA1-204ENST00000409323 LRRC9Q6ZRR7 1453 aa22.02■■□□□ 1.12
CHRNA1-204ENST00000409323 KIF14Q15058 1648 aa22.02■■□□□ 1.12
CHRNA1-204ENST00000409323 TROQ12816 1431 aaPredicted RBP22.01■■□□□ 1.11
CHRNA1-204ENST00000409323 MAP3K1Q13233 1512 aa22.01■■□□□ 1.11
CHRNA1-204ENST00000409323 EHBP1L1Q8N3D4 1523 aa21.98■■□□□ 1.11
CHRNA1-204ENST00000409323 FAM69CQ0P6D2 419 aa21.95■■□□□ 1.1
CHRNA1-204ENST00000409323 DIP2BQ9P265 1576 aa21.94■■□□□ 1.1
CHRNA1-204ENST00000409323 TRHP20396 242 aaPredicted RBP21.94■■□□□ 1.1
CHRNA1-204ENST00000409323 TTC37Q6PGP7 1564 aa21.93■■□□□ 1.1
CHRNA1-204ENST00000409323 KIF13AQ9H1H9 1805 aa21.93■■□□□ 1.1
CHRNA1-204ENST00000409323 ABCC10Q5T3U5 1492 aa21.92■■□□□ 1.1
CHRNA1-204ENST00000409323 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.92■■□□□ 1.1
CHRNA1-204ENST00000409323 SUPT6HQ7KZ85 1726 aaKnown RBP21.92■■□□□ 1.1
CHRNA1-204ENST00000409323 NCOA2Q15596 1464 aa21.9■■□□□ 1.1
CHRNA1-204ENST00000409323 TSPOAP1O95153 1857 aa21.88■■□□□ 1.09
CHRNA1-204ENST00000409323 ABCA9Q8IUA7 1624 aa21.86■■□□□ 1.09
CHRNA1-204ENST00000409323 PHLDB1Q86UU1 1377 aa21.83■■□□□ 1.08
CHRNA1-204ENST00000409323 GLI2P10070 1586 aa21.82■■□□□ 1.08
CHRNA1-204ENST00000409323 CDC42BPAQ5VT25 1732 aa21.82■■□□□ 1.08
CHRNA1-204ENST00000409323 CCNB3Q8WWL7 1395 aa21.82■■□□□ 1.08
CHRNA1-204ENST00000409323 MAP3K4Q9Y6R4 1608 aa21.82■■□□□ 1.08
CHRNA1-204ENST00000409323 CD109Q6YHK3 1445 aa21.82■■□□□ 1.08
CHRNA1-204ENST00000409323 MYO5CQ9NQX4 1742 aa21.81■■□□□ 1.08
CHRNA1-204ENST00000409323 GPATCH8Q9UKJ3 1502 aaKnown RBP21.79■■□□□ 1.08
CHRNA1-204ENST00000409323 CDC42BPBQ9Y5S2 1711 aa21.79■■□□□ 1.08
CHRNA1-204ENST00000409323 ZNF777Q9ULD5 760 aaPredicted RBP21.77■■□□□ 1.08
CHRNA1-204ENST00000409323 PREX2Q70Z35 1606 aa21.77■■□□□ 1.08
CHRNA1-204ENST00000409323 ARHGAP5Q13017 1502 aa21.76■■□□□ 1.07
CHRNA1-204ENST00000409323 PPRC1Q5VV67 1664 aaKnown RBP21.76■■□□□ 1.07
CHRNA1-204ENST00000409323 ITSN2Q9NZM3 1697 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms