RNA–Protein interactions for RNA: ENST00000409204.4

PCDH20-201, Transcript of protocadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDH20, Length 4,778 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20-201ENST00000409204 RRP7BPQ9NSQ0 103 aa16.75■□□□□ 0.27
PCDH20-201ENST00000409204 TSPY4P0CV99 314 aa16.74■□□□□ 0.27
PCDH20-201ENST00000409204 TSPY10P0CW01 314 aa16.74■□□□□ 0.27
PCDH20-201ENST00000409204 KCNH8Q96L42 1107 aa16.73■□□□□ 0.27
PCDH20-201ENST00000409204 FHAD1B1AJZ9 1412 aa16.73■□□□□ 0.27
PCDH20-201ENST00000409204 TONSLQ96HA7 1378 aa16.73■□□□□ 0.27
PCDH20-201ENST00000409204 KANK4Q5T7N3 995 aaPredicted RBP16.71■□□□□ 0.27
PCDH20-201ENST00000409204 RTL5Q5HYW3 569 aaPredicted RBP16.71■□□□□ 0.27
PCDH20-201ENST00000409204 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.66■□□□□ 0.26
PCDH20-201ENST00000409204 SLC24A1O60721 1099 aa16.66■□□□□ 0.26
PCDH20-201ENST00000409204 CFDP1Q9UEE9 299 aaPredicted RBP16.66■□□□□ 0.26
PCDH20-201ENST00000409204 STAG3Q9UJ98 1225 aa16.65■□□□□ 0.26
PCDH20-201ENST00000409204 CANXP27824 592 aaKnown RBP16.65■□□□□ 0.26
PCDH20-201ENST00000409204 CHGAP10645 457 aaKnown RBP16.64■□□□□ 0.25
PCDH20-201ENST00000409204 CCNB3Q8WWL7 1395 aa16.63■□□□□ 0.25
PCDH20-201ENST00000409204 FGD5Q6ZNL6 1462 aa16.62■□□□□ 0.25
PCDH20-201ENST00000409204 CFTRP13569 1480 aa16.61■□□□□ 0.25
PCDH20-201ENST00000409204 IGF1RP08069 1367 aa16.59■□□□□ 0.25
PCDH20-201ENST00000409204 RAD54L2Q9Y4B4 1467 aa16.58■□□□□ 0.24
PCDH20-201ENST00000409204 CC2D2AQ9P2K1 1620 aa16.58■□□□□ 0.24
PCDH20-201ENST00000409204 HMGXB3Q12766 1538 aa16.56■□□□□ 0.24
PCDH20-201ENST00000409204 FHOD3Q2V2M9 1422 aa16.56■□□□□ 0.24
PCDH20-201ENST00000409204 DDX10Q13206 875 aaKnown RBP16.55■□□□□ 0.24
PCDH20-201ENST00000409204 NESP48681 1621 aa16.55■□□□□ 0.24
PCDH20-201ENST00000409204 GTF3C3Q9Y5Q9 886 aa16.53■□□□□ 0.24
PCDH20-201ENST00000409204 FMN1Q68DA7 1419 aa16.53■□□□□ 0.24
PCDH20-201ENST00000409204 SYNJ1O43426 1573 aa16.52■□□□□ 0.24
PCDH20-201ENST00000409204 HIRIP3Q9BW71 556 aaPredicted RBP16.52■□□□□ 0.24
PCDH20-201ENST00000409204 KDM2AQ9Y2K7 1162 aa16.5■□□□□ 0.23
PCDH20-201ENST00000409204 DNAJC5BQ9UF47 199 aa16.5■□□□□ 0.23
PCDH20-201ENST00000409204 UNC13AQ9UPW8 1703 aa16.49■□□□□ 0.23
PCDH20-201ENST00000409204 CARMIL2Q6F5E8 1435 aa16.49■□□□□ 0.23
PCDH20-201ENST00000409204 SIN3AQ96ST3 1273 aa16.49■□□□□ 0.23
PCDH20-201ENST00000409204 PLPPR3Q6T4P5 718 aa16.47■□□□□ 0.23
PCDH20-201ENST00000409204 GAPVD1Q14C86 1478 aa16.47■□□□□ 0.23
PCDH20-201ENST00000409204 JPH4Q96JJ6 628 aa16.47■□□□□ 0.23
PCDH20-201ENST00000409204 BCL11AQ9H165 835 aa16.47■□□□□ 0.23
PCDH20-201ENST00000409204 ARHGAP35Q9NRY4 1499 aa16.46■□□□□ 0.23
PCDH20-201ENST00000409204 AQRO60306 1485 aaKnown RBP eCLIP16.41■□□□□ 0.22
PCDH20-201ENST00000409204 CUX1P39880 1505 aa16.4■□□□□ 0.22
PCDH20-201ENST00000409204 MIER1Q8N108 512 aa16.38■□□□□ 0.21
PCDH20-201ENST00000409204 RGL3Q3MIN7 710 aa16.38■□□□□ 0.21
PCDH20-201ENST00000409204 PEG3Q9GZU2 1588 aa16.38■□□□□ 0.21
PCDH20-201ENST00000409204 SETD5Q9C0A6 1442 aa16.38■□□□□ 0.21
PCDH20-201ENST00000409204 ACIN1Q9UKV3 1341 aaKnown RBP16.37■□□□□ 0.21
PCDH20-201ENST00000409204 TOP2BQ02880 1626 aa16.37■□□□□ 0.21
PCDH20-201ENST00000409204 EIF4G2P78344 907 aaKnown RBP eCLIP16.36■□□□□ 0.21
PCDH20-201ENST00000409204 HNRNPUQ00839 825 aaKnown RBP eCLIP16.35■□□□□ 0.21
PCDH20-201ENST00000409204 TOPBP1Q92547 1522 aa16.34■□□□□ 0.21
PCDH20-201ENST00000409204 TMC1Q8TDI8 760 aa16.34■□□□□ 0.21
PCDH20-201ENST00000409204 RAB3GAP2Q9H2M9 1393 aa16.33■□□□□ 0.2
PCDH20-201ENST00000409204 FAM9BQ8IZU0 186 aa16.32■□□□□ 0.2
PCDH20-201ENST00000409204 POLA1P09884 1462 aaPredicted RBP16.32■□□□□ 0.2
PCDH20-201ENST00000409204 KIF21BO75037 1637 aa16.31■□□□□ 0.2
PCDH20-201ENST00000409204 PRXQ9BXM0 1461 aa16.3■□□□□ 0.2
PCDH20-201ENST00000409204 ANP32AP39687 249 aaKnown RBP16.3■□□□□ 0.2
PCDH20-201ENST00000409204 WDR43Q15061 677 aaKnown RBP eCLIP16.27■□□□□ 0.19
PCDH20-201ENST00000409204 FOXD1Q16676 465 aa16.26■□□□□ 0.19
PCDH20-201ENST00000409204 ERICH3Q5RHP9 1530 aa16.26■□□□□ 0.19
PCDH20-201ENST00000409204 MRC2Q9UBG0 1479 aa16.25■□□□□ 0.19
PCDH20-201ENST00000409204 SENP3Q9H4L4 574 aaPredicted RBP16.25■□□□□ 0.19
PCDH20-201ENST00000409204 ARAP1Q96P48 1450 aa16.24■□□□□ 0.19
PCDH20-201ENST00000409204 SALL2Q9Y467 1007 aaPredicted RBP16.24■□□□□ 0.19
PCDH20-201ENST00000409204 GRIN2BQ13224 1484 aa16.24■□□□□ 0.19
PCDH20-201ENST00000409204 PPP1R15AO75807 674 aaPredicted RBP16.23■□□□□ 0.19
PCDH20-201ENST00000409204 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.23■□□□□ 0.19
PCDH20-201ENST00000409204 PTPRGP23470 1445 aa16.23■□□□□ 0.19
PCDH20-201ENST00000409204 MRS2Q9HD23 443 aa16.23■□□□□ 0.19
PCDH20-201ENST00000409204 CCDC18Q5T9S5 1454 aa16.23■□□□□ 0.19
PCDH20-201ENST00000409204 FKBP8Q14318 412 aa16.22■□□□□ 0.19
PCDH20-201ENST00000409204 EFCAB2Q5VUJ9 269 aa16.22■□□□□ 0.19
PCDH20-201ENST00000409204 HNRNPMP52272 730 aaKnown RBP eCLIP16.21■□□□□ 0.19
PCDH20-201ENST00000409204 DNMBPQ6XZF7 1577 aa16.21■□□□□ 0.18
PCDH20-201ENST00000409204 TIMELESSQ9UNS1 1208 aa16.21■□□□□ 0.18
PCDH20-201ENST00000409204 PKD2Q13563 968 aa16.2■□□□□ 0.18
PCDH20-201ENST00000409204 MPHOSPH9Q99550 1183 aa16.2■□□□□ 0.18
PCDH20-201ENST00000409204 UPF2Q9HAU5 1272 aaKnown RBP16.2■□□□□ 0.18
PCDH20-201ENST00000409204 CARD11Q9BXL7 1154 aa16.19■□□□□ 0.18
PCDH20-201ENST00000409204 NPM2Q86SE8 214 aaKnown RBP16.18■□□□□ 0.18
PCDH20-201ENST00000409204 LAMC3Q9Y6N6 1575 aa16.16■□□□□ 0.18
PCDH20-201ENST00000409204 IFT140Q96RY7 1462 aa16.16■□□□□ 0.18
PCDH20-201ENST00000409204 ANKRD30AQ9BXX3 1397 aa16.16■□□□□ 0.18
PCDH20-201ENST00000409204 HSP90AA1P07900 732 aaKnown RBP16.15■□□□□ 0.18
PCDH20-201ENST00000409204 DCAF11Q8TEB1 546 aa16.15■□□□□ 0.18
PCDH20-201ENST00000409204 SCAF1Q9H7N4 1312 aaKnown RBP16.14■□□□□ 0.17
PCDH20-201ENST00000409204 NUP155O75694 1391 aa16.14■□□□□ 0.17
PCDH20-201ENST00000409204 PHLDB1Q86UU1 1377 aa16.14■□□□□ 0.17
PCDH20-201ENST00000409204 ARID4BQ4LE39 1312 aaPredicted RBP16.13■□□□□ 0.17
PCDH20-201ENST00000409204 ABCA10Q8WWZ4 1543 aa16.12■□□□□ 0.17
PCDH20-201ENST00000409204 DHX57Q6P158 1386 aaKnown RBP16.12■□□□□ 0.17
PCDH20-201ENST00000409204 CCDC136Q96JN2 1154 aa16.12■□□□□ 0.17
PCDH20-201ENST00000409204 CDCA8Q53HL2 280 aa16.11■□□□□ 0.17
PCDH20-201ENST00000409204 CASKIN1Q8WXD9 1431 aa16.11■□□□□ 0.17
PCDH20-201ENST00000409204 OSCARQ8IYS5 282 aa16.11■□□□□ 0.17
PCDH20-201ENST00000409204 LRRC9Q6ZRR7 1453 aa16.11■□□□□ 0.17
PCDH20-201ENST00000409204 C14orf37Q86TY3 774 aa16.11■□□□□ 0.17
PCDH20-201ENST00000409204 GGT6Q6P531 493 aa16.1■□□□□ 0.17
PCDH20-201ENST00000409204 RSPH4AQ5TD94 716 aa16.08■□□□□ 0.17
PCDH20-201ENST00000409204 ZNF644Q9H582 1327 aaPredicted RBP16.08■□□□□ 0.16
PCDH20-201ENST00000409204 URB2Q14146 1524 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms