RNA–Protein interactions for RNA: ENST00000409159.2

RAB1C-201, Transcript of RAB1C, member RAS oncogene family pseudogene, humanhuman

BASIC

Gene RAB1C, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1C-201ENST00000409159 NUP160Q12769 1436 aa17.78■□□□□ 0.44
RAB1C-201ENST00000409159 EFCAB5A4FU69 1503 aa17.75■□□□□ 0.43
RAB1C-201ENST00000409159 CTTNBP2Q8WZ74 1663 aa17.72■□□□□ 0.43
RAB1C-201ENST00000409159 ARHGAP35Q9NRY4 1499 aa17.72■□□□□ 0.43
RAB1C-201ENST00000409159 VPS8Q8N3P4 1428 aa17.71■□□□□ 0.43
RAB1C-201ENST00000409159 IQGAP2Q13576 1575 aa17.7■□□□□ 0.42
RAB1C-201ENST00000409159 FBLN2P98095 1184 aa17.7■□□□□ 0.42
RAB1C-201ENST00000409159 UGGT2Q9NYU1 1516 aa17.69■□□□□ 0.42
RAB1C-201ENST00000409159 ARAP1Q96P48 1450 aa17.67■□□□□ 0.42
RAB1C-201ENST00000409159 CEP170Q5SW79 1584 aa17.66■□□□□ 0.42
RAB1C-201ENST00000409159 SAMD9Q5K651 1589 aa17.64■□□□□ 0.41
RAB1C-201ENST00000409159 FMN1Q68DA7 1419 aa17.62■□□□□ 0.41
RAB1C-201ENST00000409159 RANGAP1P46060 587 aaPredicted RBP17.61■□□□□ 0.41
RAB1C-201ENST00000409159 JPH4Q96JJ6 628 aa17.61■□□□□ 0.41
RAB1C-201ENST00000409159 CARMIL2Q6F5E8 1435 aa17.59■□□□□ 0.41
RAB1C-201ENST00000409159 DISP1Q96F81 1524 aa17.55■□□□□ 0.4
RAB1C-201ENST00000409159 FHOD3Q2V2M9 1422 aa17.55■□□□□ 0.4
RAB1C-201ENST00000409159 CHD1O14646 1710 aa17.54■□□□□ 0.4
RAB1C-201ENST00000409159 APLP2Q06481 763 aa17.53■□□□□ 0.4
RAB1C-201ENST00000409159 CASKIN1Q8WXD9 1431 aa17.53■□□□□ 0.4
RAB1C-201ENST00000409159 MAP3K1Q13233 1512 aa17.52■□□□□ 0.4
RAB1C-201ENST00000409159 CLASP1Q7Z460 1538 aa17.52■□□□□ 0.4
RAB1C-201ENST00000409159 KIAA0556O60303 1618 aa17.5■□□□□ 0.39
RAB1C-201ENST00000409159 FYCO1Q9BQS8 1478 aa17.5■□□□□ 0.39
RAB1C-201ENST00000409159 P3H3Q8IVL6 736 aa17.5■□□□□ 0.39
RAB1C-201ENST00000409159 OSCARQ8IYS5 282 aa17.5■□□□□ 0.39
RAB1C-201ENST00000409159 SHROOM2Q13796 1616 aa17.49■□□□□ 0.39
RAB1C-201ENST00000409159 PRG4Q92954 1404 aaPredicted RBP17.47■□□□□ 0.39
RAB1C-201ENST00000409159 PTPRGP23470 1445 aa17.39■□□□□ 0.38
RAB1C-201ENST00000409159 PCF11O94913 1555 aaKnown RBP17.39■□□□□ 0.37
RAB1C-201ENST00000409159 CCDC18Q5T9S5 1454 aa17.38■□□□□ 0.37
RAB1C-201ENST00000409159 TRIM26Q12899 539 aaPredicted RBP17.36■□□□□ 0.37
RAB1C-201ENST00000409159 HECW1Q76N89 1606 aa17.36■□□□□ 0.37
RAB1C-201ENST00000409159 TIAM1Q13009 1591 aa17.35■□□□□ 0.37
RAB1C-201ENST00000409159 LRRC9Q6ZRR7 1453 aa17.31■□□□□ 0.36
RAB1C-201ENST00000409159 ATP1B4Q9UN42 357 aaPredicted RBP17.31■□□□□ 0.36
RAB1C-201ENST00000409159 ABCA8O94911 1581 aa17.31■□□□□ 0.36
RAB1C-201ENST00000409159 EPRSP07814 1512 aaKnown RBP17.31■□□□□ 0.36
RAB1C-201ENST00000409159 RAPGEF6Q8TEU7 1601 aa17.3■□□□□ 0.36
RAB1C-201ENST00000409159 NUP153P49790 1475 aaKnown RBP17.3■□□□□ 0.36
RAB1C-201ENST00000409159 UACAQ9BZF9 1416 aa17.3■□□□□ 0.36
RAB1C-201ENST00000409159 KANK4Q5T7N3 995 aaPredicted RBP17.29■□□□□ 0.36
RAB1C-201ENST00000409159 CDK11AQ9UQ88 783 aaPredicted RBP17.29■□□□□ 0.36
RAB1C-201ENST00000409159 CFAP43Q8NDM7 1665 aa17.29■□□□□ 0.36
RAB1C-201ENST00000409159 UHRF1BP1LA0JNW5 1464 aa17.28■□□□□ 0.36
RAB1C-201ENST00000409159 PLB1Q6P1J6 1458 aa17.28■□□□□ 0.36
RAB1C-201ENST00000409159 MTUS2Q5JR59 1369 aa17.25■□□□□ 0.35
RAB1C-201ENST00000409159 ERCC6L2Q5T890 1561 aa17.24■□□□□ 0.35
RAB1C-201ENST00000409159 PPARGC1BQ86YN6 1023 aaKnown RBP17.23■□□□□ 0.35
RAB1C-201ENST00000409159 EHBP1L1Q8N3D4 1523 aa17.22■□□□□ 0.35
RAB1C-201ENST00000409159 ABCC2Q92887 1545 aa17.21■□□□□ 0.35
RAB1C-201ENST00000409159 TTBK1Q5TCY1 1321 aaPredicted RBP17.2■□□□□ 0.34
RAB1C-201ENST00000409159 ATP10BO94823 1461 aa17.19■□□□□ 0.34
RAB1C-201ENST00000409159 TROQ12816 1431 aaPredicted RBP17.17■□□□□ 0.34
RAB1C-201ENST00000409159 CDK13Q14004 1512 aaKnown RBP17.16■□□□□ 0.34
RAB1C-201ENST00000409159 RRBP1Q9P2E9 1410 aaKnown RBP17.16■□□□□ 0.34
RAB1C-201ENST00000409159 PLEKHD1A6NEE1 506 aa17.16■□□□□ 0.34
RAB1C-201ENST00000409159 KDM5BQ9UGL1 1544 aa17.16■□□□□ 0.34
RAB1C-201ENST00000409159 PCGF6Q9BYE7 350 aa17.14■□□□□ 0.33
RAB1C-201ENST00000409159 ARHGEF11O15085 1522 aa17.14■□□□□ 0.33
RAB1C-201ENST00000409159 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.14■□□□□ 0.33
RAB1C-201ENST00000409159 LRRIQ1Q96JM4 1722 aa17.13■□□□□ 0.33
RAB1C-201ENST00000409159 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.13■□□□□ 0.33
RAB1C-201ENST00000409159 HNRNPUL2Q1KMD3 747 aaKnown RBP17.13■□□□□ 0.33
RAB1C-201ENST00000409159 NCOA2Q15596 1464 aa17.12■□□□□ 0.33
RAB1C-201ENST00000409159 MAGI3Q5TCQ9 1506 aa17.11■□□□□ 0.33
RAB1C-201ENST00000409159 PHLDB1Q86UU1 1377 aa17.11■□□□□ 0.33
RAB1C-201ENST00000409159 CCNB3Q8WWL7 1395 aa17.1■□□□□ 0.33
RAB1C-201ENST00000409159 SUPT6HQ7KZ85 1726 aaKnown RBP17.1■□□□□ 0.33
RAB1C-201ENST00000409159 MYOM3Q5VTT5 1437 aa17.08■□□□□ 0.32
RAB1C-201ENST00000409159 MIA2Q96PC5 1412 aa17.08■□□□□ 0.32
RAB1C-201ENST00000409159 ARID3CA6NKF2 412 aa17.06■□□□□ 0.32
RAB1C-201ENST00000409159 NPM1P06748 294 aaKnown RBP eCLIP17.05■□□□□ 0.32
RAB1C-201ENST00000409159 FGD6Q6ZV73 1430 aa17.04■□□□□ 0.32
RAB1C-201ENST00000409159 ADCY10Q96PN6 1610 aa17.04■□□□□ 0.32
RAB1C-201ENST00000409159 ABCC10Q5T3U5 1492 aa17■□□□□ 0.31
RAB1C-201ENST00000409159 KIF14Q15058 1648 aa17■□□□□ 0.31
RAB1C-201ENST00000409159 TCOF1Q13428 1488 aaKnown RBP16.99■□□□□ 0.31
RAB1C-201ENST00000409159 RIMBP3CA6NJZ7 1639 aa16.99■□□□□ 0.31
RAB1C-201ENST00000409159 RIMBP3BA6NNM3 1639 aa16.99■□□□□ 0.31
RAB1C-201ENST00000409159 ZCCHC11Q5TAX3 1644 aaKnown RBP16.99■□□□□ 0.31
RAB1C-201ENST00000409159 RIMBP3Q9UFD9 1639 aa16.99■□□□□ 0.31
RAB1C-201ENST00000409159 GPATCH8Q9UKJ3 1502 aaKnown RBP16.97■□□□□ 0.31
RAB1C-201ENST00000409159 WDR7Q9Y4E6 1490 aa16.97■□□□□ 0.31
RAB1C-201ENST00000409159 CYB5RLQ6IPT4 315 aa16.94■□□□□ 0.3
RAB1C-201ENST00000409159 CFDP1Q9UEE9 299 aaPredicted RBP16.94■□□□□ 0.3
RAB1C-201ENST00000409159 ASXL2Q76L83 1435 aa16.93■□□□□ 0.3
RAB1C-201ENST00000409159 FAM50AQ14320 339 aaKnown RBP16.92■□□□□ 0.3
RAB1C-201ENST00000409159 ITSN2Q9NZM3 1697 aa16.91■□□□□ 0.3
RAB1C-201ENST00000409159 MAPKBP1O60336 1514 aa16.9■□□□□ 0.3
RAB1C-201ENST00000409159 ARAP3Q8WWN8 1544 aa16.9■□□□□ 0.3
RAB1C-201ENST00000409159 PTPN23Q9H3S7 1636 aa16.89■□□□□ 0.29
RAB1C-201ENST00000409159 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.89■□□□□ 0.29
RAB1C-201ENST00000409159 PLCH2O75038 1416 aa16.88■□□□□ 0.29
RAB1C-201ENST00000409159 RSPH4AQ5TD94 716 aa16.88■□□□□ 0.29
RAB1C-201ENST00000409159 HRCP23327 699 aa16.87■□□□□ 0.29
RAB1C-201ENST00000409159 KCNH8Q96L42 1107 aa16.86■□□□□ 0.29
RAB1C-201ENST00000409159 PLEKHH2Q8IVE3 1493 aa16.86■□□□□ 0.29
RAB1C-201ENST00000409159 ACIN1Q9UKV3 1341 aaKnown RBP16.85■□□□□ 0.29
RAB1C-201ENST00000409159 EFCAB2Q5VUJ9 269 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms