RNA–Protein interactions for RNA: ENST00000408981.6

RPE-203, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 5

Gene RPE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-203ENST00000408981 TOP2BQ02880 1626 aa16.56■□□□□ 0.24
RPE-203ENST00000408981 TOP2AP11388 1531 aaKnown RBP16.51■□□□□ 0.23
RPE-203ENST00000408981 SHROOM2Q13796 1616 aa16.48■□□□□ 0.23
RPE-203ENST00000408981 PRG4Q92954 1404 aaPredicted RBP16.45■□□□□ 0.22
RPE-203ENST00000408981 GRIN2AQ12879 1464 aa16.44■□□□□ 0.22
RPE-203ENST00000408981 COL17A1Q9UMD9 1497 aaPredicted RBP16.44■□□□□ 0.22
RPE-203ENST00000408981 PBRM1Q86U86 1689 aa16.43■□□□□ 0.22
RPE-203ENST00000408981 FGD5Q6ZNL6 1462 aa16.43■□□□□ 0.22
RPE-203ENST00000408981 NUP160Q12769 1436 aa16.43■□□□□ 0.22
RPE-203ENST00000408981 ADCY10Q96PN6 1610 aa16.39■□□□□ 0.21
RPE-203ENST00000408981 PPRC1Q5VV67 1664 aaKnown RBP16.37■□□□□ 0.21
RPE-203ENST00000408981 CCDC88BA6NC98 1476 aa16.36■□□□□ 0.21
RPE-203ENST00000408981 PCF11O94913 1555 aaKnown RBP16.35■□□□□ 0.21
RPE-203ENST00000408981 JPH4Q96JJ6 628 aa16.31■□□□□ 0.2
RPE-203ENST00000408981 PTPRMP28827 1452 aa16.3■□□□□ 0.2
RPE-203ENST00000408981 HSPA2P54652 639 aa16.26■□□□□ 0.19
RPE-203ENST00000408981 GLI2P10070 1586 aa16.26■□□□□ 0.19
RPE-203ENST00000408981 TEX14Q8IWB6 1497 aa16.23■□□□□ 0.19
RPE-203ENST00000408981 ADAMTS12P58397 1594 aa16.22■□□□□ 0.19
RPE-203ENST00000408981 ABCA5Q8WWZ7 1642 aa16.22■□□□□ 0.19
RPE-203ENST00000408981 KIF21BO75037 1637 aa16.19■□□□□ 0.18
RPE-203ENST00000408981 ASXL2Q76L83 1435 aa16.19■□□□□ 0.18
RPE-203ENST00000408981 PLB1Q6P1J6 1458 aa16.18■□□□□ 0.18
RPE-203ENST00000408981 CUX1P39880 1505 aa16.16■□□□□ 0.18
RPE-203ENST00000408981 FHAD1B1AJZ9 1412 aa16.15■□□□□ 0.18
RPE-203ENST00000408981 ABCA10Q8WWZ4 1543 aa16.14■□□□□ 0.17
RPE-203ENST00000408981 ADAMTSL3P82987 1691 aa16.11■□□□□ 0.17
RPE-203ENST00000408981 MAP3K4Q9Y6R4 1608 aa16.11■□□□□ 0.17
RPE-203ENST00000408981 ABCC2Q92887 1545 aa16.08■□□□□ 0.16
RPE-203ENST00000408981 EPRSP07814 1512 aaKnown RBP16.06■□□□□ 0.16
RPE-203ENST00000408981 TTBK1Q5TCY1 1321 aaPredicted RBP16.06■□□□□ 0.16
RPE-203ENST00000408981 KIAA0586Q9BVV6 1533 aa16.04■□□□□ 0.16
RPE-203ENST00000408981 PLPPR3Q6T4P5 718 aa16.03■□□□□ 0.16
RPE-203ENST00000408981 RUSC2Q8N2Y8 1516 aa16.03■□□□□ 0.16
RPE-203ENST00000408981 PTPRGP23470 1445 aa16.01■□□□□ 0.15
RPE-203ENST00000408981 MADDQ8WXG6 1647 aa16.01■□□□□ 0.15
RPE-203ENST00000408981 ARID4BQ4LE39 1312 aaPredicted RBP15.97■□□□□ 0.15
RPE-203ENST00000408981 DMRT2Q9Y5R5 561 aa15.97■□□□□ 0.15
RPE-203ENST00000408981 CUL7Q14999 1698 aa15.96■□□□□ 0.15
RPE-203ENST00000408981 MED1Q15648 1581 aaPredicted RBP15.95■□□□□ 0.14
RPE-203ENST00000408981 PHF23Q9BUL5 403 aaPredicted RBP15.94■□□□□ 0.14
RPE-203ENST00000408981 BCORL1Q5H9F3 1711 aa15.93■□□□□ 0.14
RPE-203ENST00000408981 RIMS1Q86UR5 1692 aaKnown RBP15.92■□□□□ 0.14
RPE-203ENST00000408981 ERICH3Q5RHP9 1530 aa15.89■□□□□ 0.13
RPE-203ENST00000408981 YEATS2Q9ULM3 1422 aa15.89■□□□□ 0.13
RPE-203ENST00000408981 IQSEC2Q5JU85 1478 aa15.88■□□□□ 0.13
RPE-203ENST00000408981 MAGI3Q5TCQ9 1506 aa15.87■□□□□ 0.13
RPE-203ENST00000408981 CD109Q6YHK3 1445 aa15.86■□□□□ 0.13
RPE-203ENST00000408981 UBAP1LF5GYI3 381 aa15.86■□□□□ 0.13
RPE-203ENST00000408981 UHRF1BP1LA0JNW5 1464 aa15.84■□□□□ 0.13
RPE-203ENST00000408981 TNIKQ9UKE5 1360 aa15.83■□□□□ 0.12
RPE-203ENST00000408981 WRNQ14191 1432 aaPredicted RBP eCLIP15.83■□□□□ 0.12
RPE-203ENST00000408981 UACAQ9BZF9 1416 aa15.81■□□□□ 0.12
RPE-203ENST00000408981 LTBP4Q8N2S1 1624 aa15.8■□□□□ 0.12
RPE-203ENST00000408981 KDM5BQ9UGL1 1544 aa15.79■□□□□ 0.12
RPE-203ENST00000408981 ARAP3Q8WWN8 1544 aa15.78■□□□□ 0.12
RPE-203ENST00000408981 WDR7Q9Y4E6 1490 aa15.78■□□□□ 0.12
RPE-203ENST00000408981 STRCQ7RTU9 1775 aa15.77■□□□□ 0.12
RPE-203ENST00000408981 CFAP43Q8NDM7 1665 aa15.76■□□□□ 0.11
RPE-203ENST00000408981 HSPA1LP34931 641 aa15.75■□□□□ 0.11
RPE-203ENST00000408981 PTPRTO14522 1441 aa15.75■□□□□ 0.11
RPE-203ENST00000408981 CARMIL2Q6F5E8 1435 aa15.75■□□□□ 0.11
RPE-203ENST00000408981 ZCCHC11Q5TAX3 1644 aaKnown RBP15.75■□□□□ 0.11
RPE-203ENST00000408981 KCNH8Q96L42 1107 aa15.74■□□□□ 0.11
RPE-203ENST00000408981 RAPGEF3O95398 923 aa15.73■□□□□ 0.11
RPE-203ENST00000408981 SCAF1Q9H7N4 1312 aaKnown RBP15.71■□□□□ 0.11
RPE-203ENST00000408981 PREX1Q8TCU6 1659 aa15.69■□□□□ 0.1
RPE-203ENST00000408981 POGZQ7Z3K3 1410 aa15.67■□□□□ 0.1
RPE-203ENST00000408981 PIP4K2BP78356 416 aa15.63■□□□□ 0.09
RPE-203ENST00000408981 MLECQ14165 292 aa15.62■□□□□ 0.09
RPE-203ENST00000408981 UHRF1BP1Q6BDS2 1440 aa15.61■□□□□ 0.09
RPE-203ENST00000408981 PHLDB1Q86UU1 1377 aa15.61■□□□□ 0.09
RPE-203ENST00000408981 TTC37Q6PGP7 1564 aa15.59■□□□□ 0.09
RPE-203ENST00000408981 FANCAO15360 1455 aa15.59■□□□□ 0.09
RPE-203ENST00000408981 ARHGEF40Q8TER5 1519 aa15.58■□□□□ 0.08
RPE-203ENST00000408981 CEBPAP49715 358 aaPredicted RBP15.57■□□□□ 0.08
RPE-203ENST00000408981 FER1L4A9Z1Z3 1794 aa15.55■□□□□ 0.08
RPE-203ENST00000408981 ZNF335Q9H4Z2 1342 aaPredicted RBP15.55■□□□□ 0.08
RPE-203ENST00000408981 RGS17Q9UGC6 210 aaPredicted RBP15.54■□□□□ 0.08
RPE-203ENST00000408981 FRMPD1Q5SYB0 1578 aa15.53■□□□□ 0.08
RPE-203ENST00000408981 AKNAQ7Z591 1439 aa15.51■□□□□ 0.07
RPE-203ENST00000408981 TOM1O60784 492 aa15.49■□□□□ 0.07
RPE-203ENST00000408981 DISP1Q96F81 1524 aa15.48■□□□□ 0.07
RPE-203ENST00000408981 NEO1Q92859 1461 aa15.47■□□□□ 0.07
RPE-203ENST00000408981 BIVM-ERCC5R4GMW8 1640 aa15.47■□□□□ 0.07
RPE-203ENST00000408981 NCOA1Q15788 1441 aa15.46■□□□□ 0.07
RPE-203ENST00000408981 SENP3Q9H4L4 574 aaPredicted RBP15.45■□□□□ 0.06
RPE-203ENST00000408981 IQGAP2Q13576 1575 aa15.45■□□□□ 0.06
RPE-203ENST00000408981 SIGLEC1Q9BZZ2 1709 aa15.43■□□□□ 0.06
RPE-203ENST00000408981 POTEAQ6S8J7 498 aa15.43■□□□□ 0.06
RPE-203ENST00000408981 ARHGEF12Q9NZN5 1544 aa15.4■□□□□ 0.06
RPE-203ENST00000408981 DENND4BO75064 1496 aaPredicted RBP15.39■□□□□ 0.05
RPE-203ENST00000408981 KIAA0556O60303 1618 aa15.39■□□□□ 0.05
RPE-203ENST00000408981 SETD1BQ9UPS6 1966 aaKnown RBP15.38■□□□□ 0.05
RPE-203ENST00000408981 ZFYVE16Q7Z3T8 1539 aa15.38■□□□□ 0.05
RPE-203ENST00000408981 IGF1RP08069 1367 aa15.37■□□□□ 0.05
RPE-203ENST00000408981 SETD1AO15047 1707 aaKnown RBP15.37■□□□□ 0.05
RPE-203ENST00000408981 NCKAP5LQ9HCH0 1330 aa15.37■□□□□ 0.05
RPE-203ENST00000408981 ABCA9Q8IUA7 1624 aa15.35■□□□□ 0.05
RPE-203ENST00000408981 SRCAPQ6ZRS2 3230 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms