RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 ARHGAP35Q9NRY4 1499 aa16.1■□□□□ 0.17
SNORD88C-201ENST00000408061 TRIM26Q12899 539 aaPredicted RBP16.09■□□□□ 0.17
SNORD88C-201ENST00000408061 GRIN2AQ12879 1464 aa16.08■□□□□ 0.16
SNORD88C-201ENST00000408061 APLP2Q06481 763 aa16.07■□□□□ 0.16
SNORD88C-201ENST00000408061 ARAP1Q96P48 1450 aa16.07■□□□□ 0.16
SNORD88C-201ENST00000408061 KIAA0586Q9BVV6 1533 aa16.06■□□□□ 0.16
SNORD88C-201ENST00000408061 CHMP7Q8WUX9 453 aaPredicted RBP16.05■□□□□ 0.16
SNORD88C-201ENST00000408061 IQGAP2Q13576 1575 aa16.04■□□□□ 0.16
SNORD88C-201ENST00000408061 SAMD9Q5K651 1589 aa16.01■□□□□ 0.15
SNORD88C-201ENST00000408061 RANGAP1P46060 587 aaPredicted RBP16.01■□□□□ 0.15
SNORD88C-201ENST00000408061 MAP3K1Q13233 1512 aa16■□□□□ 0.15
SNORD88C-201ENST00000408061 UGGT2Q9NYU1 1516 aa16■□□□□ 0.15
SNORD88C-201ENST00000408061 FMN1Q68DA7 1419 aa16■□□□□ 0.15
SNORD88C-201ENST00000408061 NUP160Q12769 1436 aa15.98■□□□□ 0.15
SNORD88C-201ENST00000408061 CASKIN1Q8WXD9 1431 aa15.93■□□□□ 0.14
SNORD88C-201ENST00000408061 FYCO1Q9BQS8 1478 aa15.92■□□□□ 0.14
SNORD88C-201ENST00000408061 PCGF6Q9BYE7 350 aa15.92■□□□□ 0.14
SNORD88C-201ENST00000408061 CEP170Q5SW79 1584 aa15.92■□□□□ 0.14
SNORD88C-201ENST00000408061 FBLN2P98095 1184 aa15.91■□□□□ 0.14
SNORD88C-201ENST00000408061 FHOD3Q2V2M9 1422 aa15.9■□□□□ 0.14
SNORD88C-201ENST00000408061 CARMIL2Q6F5E8 1435 aa15.89■□□□□ 0.13
SNORD88C-201ENST00000408061 P3H3Q8IVL6 736 aa15.87■□□□□ 0.13
SNORD88C-201ENST00000408061 JPH4Q96JJ6 628 aa15.87■□□□□ 0.13
SNORD88C-201ENST00000408061 CHD1O14646 1710 aa15.85■□□□□ 0.13
SNORD88C-201ENST00000408061 TIAM1Q13009 1591 aa15.85■□□□□ 0.13
SNORD88C-201ENST00000408061 KIAA0556O60303 1618 aa15.85■□□□□ 0.13
SNORD88C-201ENST00000408061 DISP1Q96F81 1524 aa15.84■□□□□ 0.13
SNORD88C-201ENST00000408061 PCF11O94913 1555 aaKnown RBP15.83■□□□□ 0.12
SNORD88C-201ENST00000408061 CFAP43Q8NDM7 1665 aa15.82■□□□□ 0.12
SNORD88C-201ENST00000408061 CCDC18Q5T9S5 1454 aa15.8■□□□□ 0.12
SNORD88C-201ENST00000408061 PPARGC1BQ86YN6 1023 aaKnown RBP15.8■□□□□ 0.12
SNORD88C-201ENST00000408061 HECW1Q76N89 1606 aa15.79■□□□□ 0.12
SNORD88C-201ENST00000408061 LRRC9Q6ZRR7 1453 aa15.78■□□□□ 0.12
SNORD88C-201ENST00000408061 SHROOM2Q13796 1616 aa15.77■□□□□ 0.12
SNORD88C-201ENST00000408061 KANK4Q5T7N3 995 aaPredicted RBP15.75■□□□□ 0.11
SNORD88C-201ENST00000408061 ATP1B4Q9UN42 357 aaPredicted RBP15.73■□□□□ 0.11
SNORD88C-201ENST00000408061 PRG4Q92954 1404 aaPredicted RBP15.72■□□□□ 0.11
SNORD88C-201ENST00000408061 CLASP1Q7Z460 1538 aa15.72■□□□□ 0.11
SNORD88C-201ENST00000408061 RAPGEF6Q8TEU7 1601 aa15.71■□□□□ 0.11
SNORD88C-201ENST00000408061 CDK11AQ9UQ88 783 aaPredicted RBP15.7■□□□□ 0.1
SNORD88C-201ENST00000408061 EPRSP07814 1512 aaKnown RBP15.69■□□□□ 0.1
SNORD88C-201ENST00000408061 MTUS2Q5JR59 1369 aa15.69■□□□□ 0.1
SNORD88C-201ENST00000408061 RRBP1Q9P2E9 1410 aaKnown RBP15.68■□□□□ 0.1
SNORD88C-201ENST00000408061 EHBP1L1Q8N3D4 1523 aa15.68■□□□□ 0.1
SNORD88C-201ENST00000408061 LRRIQ1Q96JM4 1722 aa15.67■□□□□ 0.1
SNORD88C-201ENST00000408061 PTPRGP23470 1445 aa15.67■□□□□ 0.1
SNORD88C-201ENST00000408061 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.65■□□□□ 0.1
SNORD88C-201ENST00000408061 ABCA8O94911 1581 aa15.65■□□□□ 0.1
SNORD88C-201ENST00000408061 TTBK1Q5TCY1 1321 aaPredicted RBP15.65■□□□□ 0.1
SNORD88C-201ENST00000408061 SUPT6HQ7KZ85 1726 aaKnown RBP15.64■□□□□ 0.09
SNORD88C-201ENST00000408061 OSCARQ8IYS5 282 aa15.64■□□□□ 0.09
SNORD88C-201ENST00000408061 NUP153P49790 1475 aaKnown RBP15.63■□□□□ 0.09
SNORD88C-201ENST00000408061 CCNB3Q8WWL7 1395 aa15.62■□□□□ 0.09
SNORD88C-201ENST00000408061 PLB1Q6P1J6 1458 aa15.59■□□□□ 0.09
SNORD88C-201ENST00000408061 ARHGEF11O15085 1522 aa15.58■□□□□ 0.09
SNORD88C-201ENST00000408061 UACAQ9BZF9 1416 aa15.58■□□□□ 0.08
SNORD88C-201ENST00000408061 NCOA2Q15596 1464 aa15.57■□□□□ 0.08
SNORD88C-201ENST00000408061 PHLDB1Q86UU1 1377 aa15.56■□□□□ 0.08
SNORD88C-201ENST00000408061 CDK13Q14004 1512 aaKnown RBP15.56■□□□□ 0.08
SNORD88C-201ENST00000408061 UHRF1BP1LA0JNW5 1464 aa15.55■□□□□ 0.08
SNORD88C-201ENST00000408061 TROQ12816 1431 aaPredicted RBP15.55■□□□□ 0.08
SNORD88C-201ENST00000408061 ZEB1P37275 1124 aaPredicted RBP15.55■□□□□ 0.08
SNORD88C-201ENST00000408061 MYOM3Q5VTT5 1437 aa15.54■□□□□ 0.08
SNORD88C-201ENST00000408061 PLEKHD1A6NEE1 506 aa15.54■□□□□ 0.08
SNORD88C-201ENST00000408061 ATP10BO94823 1461 aa15.53■□□□□ 0.08
SNORD88C-201ENST00000408061 MIA2Q96PC5 1412 aa15.53■□□□□ 0.08
SNORD88C-201ENST00000408061 MAGI3Q5TCQ9 1506 aa15.53■□□□□ 0.08
SNORD88C-201ENST00000408061 FGD6Q6ZV73 1430 aa15.52■□□□□ 0.08
SNORD88C-201ENST00000408061 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.52■□□□□ 0.08
SNORD88C-201ENST00000408061 HRCP23327 699 aa15.52■□□□□ 0.08
SNORD88C-201ENST00000408061 HNRNPUL2Q1KMD3 747 aaKnown RBP15.52■□□□□ 0.08
SNORD88C-201ENST00000408061 ABCC2Q92887 1545 aa15.52■□□□□ 0.07
SNORD88C-201ENST00000408061 ADCY10Q96PN6 1610 aa15.51■□□□□ 0.07
SNORD88C-201ENST00000408061 ERCC6L2Q5T890 1561 aa15.49■□□□□ 0.07
SNORD88C-201ENST00000408061 TCOF1Q13428 1488 aaKnown RBP15.46■□□□□ 0.07
SNORD88C-201ENST00000408061 KDM5BQ9UGL1 1544 aa15.45■□□□□ 0.06
SNORD88C-201ENST00000408061 ITSN2Q9NZM3 1697 aa15.44■□□□□ 0.06
SNORD88C-201ENST00000408061 ACIN1Q9UKV3 1341 aaKnown RBP15.44■□□□□ 0.06
SNORD88C-201ENST00000408061 FAM50AQ14320 339 aaKnown RBP15.44■□□□□ 0.06
SNORD88C-201ENST00000408061 KIF14Q15058 1648 aa15.43■□□□□ 0.06
SNORD88C-201ENST00000408061 PTPN23Q9H3S7 1636 aa15.43■□□□□ 0.06
SNORD88C-201ENST00000408061 ARID3CA6NKF2 412 aa15.4■□□□□ 0.06
SNORD88C-201ENST00000408061 CCER1Q8TC90 406 aaPredicted RBP15.39■□□□□ 0.05
SNORD88C-201ENST00000408061 CLSPNQ9HAW4 1339 aa15.39■□□□□ 0.05
SNORD88C-201ENST00000408061 ABCC10Q5T3U5 1492 aa15.38■□□□□ 0.05
SNORD88C-201ENST00000408061 GPATCH8Q9UKJ3 1502 aaKnown RBP15.38■□□□□ 0.05
SNORD88C-201ENST00000408061 ZCCHC11Q5TAX3 1644 aaKnown RBP15.37■□□□□ 0.05
SNORD88C-201ENST00000408061 SETD5Q9C0A6 1442 aa15.36■□□□□ 0.05
SNORD88C-201ENST00000408061 CFDP1Q9UEE9 299 aaPredicted RBP15.36■□□□□ 0.05
SNORD88C-201ENST00000408061 AKNAQ7Z591 1439 aa15.34■□□□□ 0.05
SNORD88C-201ENST00000408061 NPM1P06748 294 aaKnown RBP eCLIP15.34■□□□□ 0.05
SNORD88C-201ENST00000408061 RSPH4AQ5TD94 716 aa15.34■□□□□ 0.05
SNORD88C-201ENST00000408061 CDC42BPAQ5VT25 1732 aa15.33■□□□□ 0.04
SNORD88C-201ENST00000408061 ITGAEP38570 1179 aa15.32■□□□□ 0.04
SNORD88C-201ENST00000408061 HFM1A2PYH4 1435 aa15.31■□□□□ 0.04
SNORD88C-201ENST00000408061 DNMT1P26358 1616 aaKnown RBP15.3■□□□□ 0.04
SNORD88C-201ENST00000408061 ROCK1Q13464 1354 aa15.3■□□□□ 0.04
SNORD88C-201ENST00000408061 PREX2Q70Z35 1606 aa15.28■□□□□ 0.04
SNORD88C-201ENST00000408061 ARAP3Q8WWN8 1544 aa15.28■□□□□ 0.04
SNORD88C-201ENST00000408061 PLEKHH2Q8IVE3 1493 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms