RNA–Protein interactions for RNA: ENST00000407540.7

MATN3-201, Transcript of matrilin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene MATN3, Length 2,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATN3-201ENST00000407540 TIAM1Q13009 1591 aa25.17■■□□□ 1.62
MATN3-201ENST00000407540 PHLDB1Q86UU1 1377 aa25.16■■□□□ 1.62
MATN3-201ENST00000407540 DNAJC5BQ9UF47 199 aa25.15■■□□□ 1.62
MATN3-201ENST00000407540 POLA1P09884 1462 aaPredicted RBP25.15■■□□□ 1.62
MATN3-201ENST00000407540 FAM50AQ14320 339 aaKnown RBP25.14■■□□□ 1.62
MATN3-201ENST00000407540 RAB3GAP2Q9H2M9 1393 aa25.14■■□□□ 1.61
MATN3-201ENST00000407540 FHOD3Q2V2M9 1422 aa25.13■■□□□ 1.61
MATN3-201ENST00000407540 LRRC9Q6ZRR7 1453 aa25.12■■□□□ 1.61
MATN3-201ENST00000407540 TOPBP1Q92547 1522 aa25.12■■□□□ 1.61
MATN3-201ENST00000407540 DNMBPQ6XZF7 1577 aa25.08■■□□□ 1.61
MATN3-201ENST00000407540 PCF11O94913 1555 aaKnown RBP25.06■■□□□ 1.6
MATN3-201ENST00000407540 ABCA10Q8WWZ4 1543 aa25.06■■□□□ 1.6
MATN3-201ENST00000407540 FHAD1B1AJZ9 1412 aa25.02■■□□□ 1.6
MATN3-201ENST00000407540 MAP3K1Q13233 1512 aa25.01■■□□□ 1.59
MATN3-201ENST00000407540 TDRD9Q8NDG6 1382 aaKnown RBP25.01■■□□□ 1.59
MATN3-201ENST00000407540 SIN3AQ96ST3 1273 aa24.99■■□□□ 1.59
MATN3-201ENST00000407540 MAPKBP1O60336 1514 aa24.98■■□□□ 1.59
MATN3-201ENST00000407540 URB2Q14146 1524 aaKnown RBP24.97■■□□□ 1.59
MATN3-201ENST00000407540 SETD5Q9C0A6 1442 aa24.97■■□□□ 1.59
MATN3-201ENST00000407540 CFAP43Q8NDM7 1665 aa24.9■■□□□ 1.58
MATN3-201ENST00000407540 CASKIN1Q8WXD9 1431 aa24.87■■□□□ 1.57
MATN3-201ENST00000407540 FYCO1Q9BQS8 1478 aa24.85■■□□□ 1.57
MATN3-201ENST00000407540 CUL7Q14999 1698 aa24.83■■□□□ 1.56
MATN3-201ENST00000407540 EFCAB5A4FU69 1503 aa24.82■■□□□ 1.56
MATN3-201ENST00000407540 KCNH8Q96L42 1107 aa24.81■■□□□ 1.56
MATN3-201ENST00000407540 CTTNBP2Q8WZ74 1663 aa24.8■■□□□ 1.56
MATN3-201ENST00000407540 HIRIP3Q9BW71 556 aaPredicted RBP24.79■■□□□ 1.56
MATN3-201ENST00000407540 LAMC3Q9Y6N6 1575 aa24.79■■□□□ 1.56
MATN3-201ENST00000407540 GAPVD1Q14C86 1478 aa24.79■■□□□ 1.56
MATN3-201ENST00000407540 SNAPC4Q5SXM2 1469 aa24.77■■□□□ 1.56
MATN3-201ENST00000407540 WDR97A6NE52 1622 aa24.76■■□□□ 1.55
MATN3-201ENST00000407540 MTUS2Q5JR59 1369 aa24.76■■□□□ 1.55
MATN3-201ENST00000407540 FMN1Q68DA7 1419 aa24.75■■□□□ 1.55
MATN3-201ENST00000407540 AQRO60306 1485 aaKnown RBP eCLIP24.74■■□□□ 1.552e-9■■■■■ 30.3
MATN3-201ENST00000407540 ABCA5Q8WWZ7 1642 aa24.73■■□□□ 1.55
MATN3-201ENST00000407540 FGD6Q6ZV73 1430 aa24.72■■□□□ 1.55
MATN3-201ENST00000407540 PTPRKQ15262 1439 aa24.72■■□□□ 1.55
MATN3-201ENST00000407540 PDS5BQ9NTI5 1447 aa24.72■■□□□ 1.55
MATN3-201ENST00000407540 DDX10Q13206 875 aaKnown RBP24.7■■□□□ 1.54
MATN3-201ENST00000407540 ARID3CA6NKF2 412 aa24.68■■□□□ 1.54
MATN3-201ENST00000407540 KIF21AQ7Z4S6 1674 aa24.67■■□□□ 1.54
MATN3-201ENST00000407540 LRRIQ1Q96JM4 1722 aa24.66■■□□□ 1.54
MATN3-201ENST00000407540 SAMD9Q5K651 1589 aa24.64■■□□□ 1.53
MATN3-201ENST00000407540 NCOA2Q15596 1464 aa24.62■■□□□ 1.53
MATN3-201ENST00000407540 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.61■■□□□ 1.53
MATN3-201ENST00000407540 GRIN2BQ13224 1484 aa24.61■■□□□ 1.53
MATN3-201ENST00000407540 PPP1R15AO75807 674 aaPredicted RBP24.61■■□□□ 1.53
MATN3-201ENST00000407540 CHIC2Q9UKJ5 165 aa24.58■■□□□ 1.53
MATN3-201ENST00000407540 CCDC18Q5T9S5 1454 aa24.58■■□□□ 1.53
MATN3-201ENST00000407540 TARBP1Q13395 1621 aaKnown RBP24.56■■□□□ 1.52
MATN3-201ENST00000407540 MAGI3Q5TCQ9 1506 aa24.55■■□□□ 1.52
MATN3-201ENST00000407540 RRP7BPQ9NSQ0 103 aa24.55■■□□□ 1.52
MATN3-201ENST00000407540 MYOM3Q5VTT5 1437 aa24.55■■□□□ 1.52
MATN3-201ENST00000407540 HFM1A2PYH4 1435 aa24.52■■□□□ 1.52
MATN3-201ENST00000407540 NAIPQ13075 1403 aa24.51■■□□□ 1.51
MATN3-201ENST00000407540 SUPT16HQ9Y5B9 1047 aaKnown RBP24.51■■□□□ 1.51
MATN3-201ENST00000407540 TONSLQ96HA7 1378 aa24.49■■□□□ 1.51
MATN3-201ENST00000407540 TIMELESSQ9UNS1 1208 aa24.49■■□□□ 1.51
MATN3-201ENST00000407540 PTPN23Q9H3S7 1636 aa24.48■■□□□ 1.51
MATN3-201ENST00000407540 UACAQ9BZF9 1416 aa24.46■■□□□ 1.51
MATN3-201ENST00000407540 SUPT6HQ7KZ85 1726 aaKnown RBP24.44■■□□□ 1.5
MATN3-201ENST00000407540 EHBP1L1Q8N3D4 1523 aa24.44■■□□□ 1.5
MATN3-201ENST00000407540 CDK13Q14004 1512 aaKnown RBP24.43■■□□□ 1.5
MATN3-201ENST00000407540 UGGT2Q9NYU1 1516 aa24.42■■□□□ 1.5
MATN3-201ENST00000407540 ZNF608Q9ULD9 1512 aaPredicted RBP24.41■■□□□ 1.5
MATN3-201ENST00000407540 PBRM1Q86U86 1689 aa24.4■■□□□ 1.5
MATN3-201ENST00000407540 TRIM52Q96A61 297 aa24.39■■□□□ 1.49
MATN3-201ENST00000407540 IQGAP2Q13576 1575 aa24.38■■□□□ 1.49
MATN3-201ENST00000407540 THOC2Q8NI27 1593 aaKnown RBP24.38■■□□□ 1.49
MATN3-201ENST00000407540 EPRSP07814 1512 aaKnown RBP24.38■■□□□ 1.49
MATN3-201ENST00000407540 ARHGEF11O15085 1522 aa24.37■■□□□ 1.49
MATN3-201ENST00000407540 FOXD1Q16676 465 aa24.36■■□□□ 1.49
MATN3-201ENST00000407540 ADAMTS12P58397 1594 aa24.35■■□□□ 1.49
MATN3-201ENST00000407540 MRC2Q9UBG0 1479 aa24.34■■□□□ 1.49
MATN3-201ENST00000407540 KDM6BO15054 1643 aa24.33■■□□□ 1.48
MATN3-201ENST00000407540 HECW1Q76N89 1606 aa24.31■■□□□ 1.48
MATN3-201ENST00000407540 DENND4BO75064 1496 aaPredicted RBP24.3■■□□□ 1.48
MATN3-201ENST00000407540 ZNF644Q9H582 1327 aaPredicted RBP24.29■■□□□ 1.48
MATN3-201ENST00000407540 ANP32CO43423 234 aa24.29■■□□□ 1.48
MATN3-201ENST00000407540 KDM5BQ9UGL1 1544 aa24.28■■□□□ 1.48
MATN3-201ENST00000407540 BCANQ96GW7 911 aa24.27■■□□□ 1.48
MATN3-201ENST00000407540 BCL11AQ9H165 835 aa24.27■■□□□ 1.48
MATN3-201ENST00000407540 TCOF1Q13428 1488 aaKnown RBP24.26■■□□□ 1.47
MATN3-201ENST00000407540 WDR62O43379 1518 aa24.26■■□□□ 1.47
MATN3-201ENST00000407540 MPHOSPH9Q99550 1183 aa24.24■■□□□ 1.47
MATN3-201ENST00000407540 DISP1Q96F81 1524 aa24.19■■□□□ 1.46
MATN3-201ENST00000407540 HSPA5P11021 654 aaKnown RBP24.18■■□□□ 1.46
MATN3-201ENST00000407540 IFT140Q96RY7 1462 aa24.17■■□□□ 1.46
MATN3-201ENST00000407540 FBLN2P98095 1184 aa24.17■■□□□ 1.46
MATN3-201ENST00000407540 CCER2I3L3R5 266 aa24.17■■□□□ 1.46
MATN3-201ENST00000407540 FKBP8Q14318 412 aa24.17■■□□□ 1.46
MATN3-201ENST00000407540 L3MBTL2Q969R5 705 aa24.17■■□□□ 1.46
MATN3-201ENST00000407540 MIA2Q96PC5 1412 aa24.16■■□□□ 1.46
MATN3-201ENST00000407540 NUP153P49790 1475 aaKnown RBP24.15■■□□□ 1.46
MATN3-201ENST00000407540 KIAA0586Q9BVV6 1533 aa24.14■■□□□ 1.45
MATN3-201ENST00000407540 WASHC2AQ641Q2 1341 aa24.14■■□□□ 1.45
MATN3-201ENST00000407540 GCC2Q8IWJ2 1684 aa24.14■■□□□ 1.45
MATN3-201ENST00000407540 KIAA0556O60303 1618 aa24.12■■□□□ 1.45
MATN3-201ENST00000407540 DAPK1P53355 1430 aa24.11■■□□□ 1.45
MATN3-201ENST00000407540 ABCC5O15440 1437 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms