RNA–Protein interactions for RNA: ENST00000405943.3

HDGFP1-201, Transcript of heparin binding growth factor pseudogene 1, humanhuman

BASIC

Gene HDGFP1, Length 252 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFP1-201ENST00000405943 ITGAEP38570 1179 aa6.26□□□□□ -1.41
HDGFP1-201ENST00000405943 KCNH8Q96L42 1107 aa6.26□□□□□ -1.41
HDGFP1-201ENST00000405943 PPP4R2Q9NY27 417 aa6.25□□□□□ -1.41
HDGFP1-201ENST00000405943 BIVM-ERCC5R4GMW8 1640 aa6.25□□□□□ -1.41
HDGFP1-201ENST00000405943 ATAD2BQ9ULI0 1458 aa6.24□□□□□ -1.41
HDGFP1-201ENST00000405943 TONSLQ96HA7 1378 aa6.24□□□□□ -1.41
HDGFP1-201ENST00000405943 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.24□□□□□ -1.41
HDGFP1-201ENST00000405943 TRIM52Q96A61 297 aa6.24□□□□□ -1.41
HDGFP1-201ENST00000405943 FHAD1B1AJZ9 1412 aa6.24□□□□□ -1.41
HDGFP1-201ENST00000405943 ARHGAP35Q9NRY4 1499 aa6.22□□□□□ -1.41
HDGFP1-201ENST00000405943 WDR97A6NE52 1622 aa6.22□□□□□ -1.41
HDGFP1-201ENST00000405943 MSH5O43196 834 aa6.22□□□□□ -1.41
HDGFP1-201ENST00000405943 TIAM1Q13009 1591 aa6.22□□□□□ -1.41
HDGFP1-201ENST00000405943 LRRC9Q6ZRR7 1453 aa6.22□□□□□ -1.41
HDGFP1-201ENST00000405943 HNRNPUQ00839 825 aaKnown RBP eCLIP6.21□□□□□ -1.42
HDGFP1-201ENST00000405943 FAM50AQ14320 339 aaKnown RBP6.21□□□□□ -1.42
HDGFP1-201ENST00000405943 RTL5Q5HYW3 569 aaPredicted RBP6.2□□□□□ -1.42
HDGFP1-201ENST00000405943 NOP58Q9Y2X3 529 aaKnown RBP6.2□□□□□ -1.42
HDGFP1-201ENST00000405943 DEKP35659 375 aaKnown RBP6.19□□□□□ -1.42
HDGFP1-201ENST00000405943 SIN3AQ96ST3 1273 aa6.19□□□□□ -1.42
HDGFP1-201ENST00000405943 ANP32AP39687 249 aaKnown RBP6.18□□□□□ -1.42
HDGFP1-201ENST00000405943 PHLDB1Q86UU1 1377 aa6.17□□□□□ -1.42
HDGFP1-201ENST00000405943 UACAQ9BZF9 1416 aa6.16□□□□□ -1.42
HDGFP1-201ENST00000405943 BICRAQ9NZM4 1560 aa6.16□□□□□ -1.42
HDGFP1-201ENST00000405943 PABPN1Q86U42 306 aaKnown RBP eCLIP6.16□□□□□ -1.42
HDGFP1-201ENST00000405943 UNC13AQ9UPW8 1703 aa6.15□□□□□ -1.42
HDGFP1-201ENST00000405943 ZBED9Q6R2W3 1325 aa6.15□□□□□ -1.43
HDGFP1-201ENST00000405943 AQRO60306 1485 aaKnown RBP eCLIP6.15□□□□□ -1.43
HDGFP1-201ENST00000405943 FYCO1Q9BQS8 1478 aa6.15□□□□□ -1.43
HDGFP1-201ENST00000405943 CUX1P39880 1505 aa6.15□□□□□ -1.43
HDGFP1-201ENST00000405943 EIF4G2P78344 907 aaKnown RBP eCLIP6.14□□□□□ -1.43
HDGFP1-201ENST00000405943 HFM1A2PYH4 1435 aa6.14□□□□□ -1.43
HDGFP1-201ENST00000405943 CCDC18Q5T9S5 1454 aa6.14□□□□□ -1.43
HDGFP1-201ENST00000405943 HMGXB3Q12766 1538 aa6.14□□□□□ -1.43
HDGFP1-201ENST00000405943 CFAP43Q8NDM7 1665 aa6.14□□□□□ -1.43
HDGFP1-201ENST00000405943 IPO9Q96P70 1041 aaKnown RBP6.13□□□□□ -1.43
HDGFP1-201ENST00000405943 HIRIP3Q9BW71 556 aaPredicted RBP6.13□□□□□ -1.43
HDGFP1-201ENST00000405943 ZBTB47Q9UFB7 747 aaPredicted RBP6.13□□□□□ -1.43
HDGFP1-201ENST00000405943 IGF1RP08069 1367 aa6.13□□□□□ -1.43
HDGFP1-201ENST00000405943 CARMIL1Q5VZK9 1371 aa6.13□□□□□ -1.43
HDGFP1-201ENST00000405943 CASKIN1Q8WXD9 1431 aa6.13□□□□□ -1.43
HDGFP1-201ENST00000405943 CNTLNQ9NXG0 1405 aa6.13□□□□□ -1.43
HDGFP1-201ENST00000405943 EFCAB5A4FU69 1503 aa6.13□□□□□ -1.43
HDGFP1-201ENST00000405943 CFTRP13569 1480 aa6.12□□□□□ -1.43
HDGFP1-201ENST00000405943 PRKCSHP14314 528 aaPredicted RBP6.12□□□□□ -1.43
HDGFP1-201ENST00000405943 NCAPD3P42695 1498 aa6.12□□□□□ -1.43
HDGFP1-201ENST00000405943 IRX6P78412 446 aaPredicted RBP6.12□□□□□ -1.43
HDGFP1-201ENST00000405943 NCOA2Q15596 1464 aa6.12□□□□□ -1.43
HDGFP1-201ENST00000405943 FMN1Q68DA7 1419 aa6.12□□□□□ -1.43
HDGFP1-201ENST00000405943 FGD6Q6ZV73 1430 aa6.12□□□□□ -1.43
HDGFP1-201ENST00000405943 USP35Q9P2H5 1018 aa6.12□□□□□ -1.43
HDGFP1-201ENST00000405943 FGD5Q6ZNL6 1462 aa6.11□□□□□ -1.43
HDGFP1-201ENST00000405943 MRS2Q9HD23 443 aa6.11□□□□□ -1.43
HDGFP1-201ENST00000405943 ATP1B4Q9UN42 357 aaPredicted RBP6.11□□□□□ -1.43
HDGFP1-201ENST00000405943 SMG6Q86US8 1419 aaKnown RBP6.1□□□□□ -1.43
HDGFP1-201ENST00000405943 HSPA5P11021 654 aaKnown RBP6.1□□□□□ -1.43
HDGFP1-201ENST00000405943 NBR1Q14596 966 aa6.1□□□□□ -1.43
HDGFP1-201ENST00000405943 CCDC136Q96JN2 1154 aa6.1□□□□□ -1.43
HDGFP1-201ENST00000405943 PCF11O94913 1555 aaKnown RBP6.1□□□□□ -1.43
HDGFP1-201ENST00000405943 WASHC2AQ641Q2 1341 aa6.09□□□□□ -1.43
HDGFP1-201ENST00000405943 B4GALNT3Q6L9W6 998 aa6.09□□□□□ -1.43
HDGFP1-201ENST00000405943 PRKRIP1Q9H875 184 aaPredicted RBP6.09□□□□□ -1.43
HDGFP1-201ENST00000405943 MTUS2Q5JR59 1369 aa6.08□□□□□ -1.44
HDGFP1-201ENST00000405943 PTPN23Q9H3S7 1636 aa6.08□□□□□ -1.44
HDGFP1-201ENST00000405943 PPM1GO15355 546 aaPredicted RBP6.08□□□□□ -1.44
HDGFP1-201ENST00000405943 FAM9BQ8IZU0 186 aa6.08□□□□□ -1.44
HDGFP1-201ENST00000405943 AKNAQ7Z591 1439 aa6.08□□□□□ -1.44
HDGFP1-201ENST00000405943 CCDC7Q96M83 1385 aa6.07□□□□□ -1.44
HDGFP1-201ENST00000405943 NUDCQ9Y266 331 aa6.07□□□□□ -1.44
HDGFP1-201ENST00000405943 NAIPQ13075 1403 aa6.07□□□□□ -1.44
HDGFP1-201ENST00000405943 NCOA1Q15788 1441 aa6.07□□□□□ -1.44
HDGFP1-201ENST00000405943 MYOM3Q5VTT5 1437 aa6.07□□□□□ -1.44
HDGFP1-201ENST00000405943 TCERG1O14776 1098 aaKnown RBP6.06□□□□□ -1.44
HDGFP1-201ENST00000405943 DDRGK1Q96HY6 314 aa6.06□□□□□ -1.44
HDGFP1-201ENST00000405943 THOC2Q8NI27 1593 aaKnown RBP6.06□□□□□ -1.44
HDGFP1-201ENST00000405943 ARID4BQ4LE39 1312 aaPredicted RBP6.05□□□□□ -1.44
HDGFP1-201ENST00000405943 RNF123Q5XPI4 1314 aa6.05□□□□□ -1.44
HDGFP1-201ENST00000405943 MS4A1P11836 297 aa6.05□□□□□ -1.44
HDGFP1-201ENST00000405943 PAK3O75914 559 aaPredicted RBP6.04□□□□□ -1.44
HDGFP1-201ENST00000405943 FHOD3Q2V2M9 1422 aa6.04□□□□□ -1.44
HDGFP1-201ENST00000405943 ROCK2O75116 1388 aaKnown RBP6.04□□□□□ -1.44
HDGFP1-201ENST00000405943 KTN1Q86UP2 1357 aaKnown RBP6.04□□□□□ -1.44
HDGFP1-201ENST00000405943 EHBP1L1Q8N3D4 1523 aa6.04□□□□□ -1.44
HDGFP1-201ENST00000405943 KDM5BQ9UGL1 1544 aa6.04□□□□□ -1.44
HDGFP1-201ENST00000405943 HECW1Q76N89 1606 aa6.03□□□□□ -1.44
HDGFP1-201ENST00000405943 MIA2Q96PC5 1412 aa6.03□□□□□ -1.44
HDGFP1-201ENST00000405943 C11orf95C9JLR9 678 aaPredicted RBP6.03□□□□□ -1.44
HDGFP1-201ENST00000405943 P3H3Q8IVL6 736 aa6.03□□□□□ -1.44
HDGFP1-201ENST00000405943 NEFMP07197 916 aa6.02□□□□□ -1.45
HDGFP1-201ENST00000405943 DAXXQ9UER7 740 aaPredicted RBP6.02□□□□□ -1.45
HDGFP1-201ENST00000405943 CADPSQ9ULU8 1353 aa6.02□□□□□ -1.45
HDGFP1-201ENST00000405943 TCOF1Q13428 1488 aaKnown RBP6.02□□□□□ -1.45
HDGFP1-201ENST00000405943 CUL7Q14999 1698 aa6.01□□□□□ -1.45
HDGFP1-201ENST00000405943 PTPRKQ15262 1439 aa6.01□□□□□ -1.45
HDGFP1-201ENST00000405943 ABCA5Q8WWZ7 1642 aa6.01□□□□□ -1.45
HDGFP1-201ENST00000405943 CC2D2AQ9P2K1 1620 aa6.01□□□□□ -1.45
HDGFP1-201ENST00000405943 PDE3BQ13370 1112 aa6.01□□□□□ -1.45
HDGFP1-201ENST00000405943 L3MBTL2Q969R5 705 aa6.01□□□□□ -1.45
HDGFP1-201ENST00000405943 MPHOSPH9Q99550 1183 aa6.01□□□□□ -1.45
HDGFP1-201ENST00000405943 SUPT6HQ7KZ85 1726 aaKnown RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms