RNA–Protein interactions for RNA: ENST00000405053.7

PDE4D-206, Transcript of phosphodiesterase 4D, humanhuman

TSL 5

Gene PDE4D, Length 512 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-206ENST00000405053 TNIKQ9UKE5 1360 aa17.59■□□□□ 0.41
PDE4D-206ENST00000405053 LOC105371045A0A1W2PR82 267 aa17.59■□□□□ 0.41
PDE4D-206ENST00000405053 UBTFP17480 764 aaKnown RBP17.59■□□□□ 0.41
PDE4D-206ENST00000405053 CTTNBP2Q8WZ74 1663 aa17.58■□□□□ 0.41
PDE4D-206ENST00000405053 EHMT2Q96KQ7 1210 aa17.57■□□□□ 0.4
PDE4D-206ENST00000405053 IQGAP2Q13576 1575 aa17.56■□□□□ 0.4
PDE4D-206ENST00000405053 SHROOM2Q13796 1616 aa17.51■□□□□ 0.39
PDE4D-206ENST00000405053 UGGT2Q9NYU1 1516 aa17.51■□□□□ 0.39
PDE4D-206ENST00000405053 JPH4Q96JJ6 628 aa17.5■□□□□ 0.39
PDE4D-206ENST00000405053 DNAJC5Q9H3Z4 198 aa17.5■□□□□ 0.39
PDE4D-206ENST00000405053 DISP1Q96F81 1524 aa17.43■□□□□ 0.38
PDE4D-206ENST00000405053 CEP162Q5TB80 1403 aa17.43■□□□□ 0.38
PDE4D-206ENST00000405053 SAMD9Q5K651 1589 aa17.43■□□□□ 0.38
PDE4D-206ENST00000405053 EFCAB5A4FU69 1503 aa17.42■□□□□ 0.38
PDE4D-206ENST00000405053 PRG4Q92954 1404 aaPredicted RBP17.42■□□□□ 0.38
PDE4D-206ENST00000405053 CLIP1P30622 1438 aa17.4■□□□□ 0.38
PDE4D-206ENST00000405053 CARMIL2Q6F5E8 1435 aa17.39■□□□□ 0.38
PDE4D-206ENST00000405053 ARHGAP35Q9NRY4 1499 aa17.39■□□□□ 0.37
PDE4D-206ENST00000405053 KIAA0556O60303 1618 aa17.39■□□□□ 0.37
PDE4D-206ENST00000405053 ERCC6L2Q5T890 1561 aa17.36■□□□□ 0.37
PDE4D-206ENST00000405053 RANGAP1P46060 587 aaPredicted RBP17.35■□□□□ 0.37
PDE4D-206ENST00000405053 ARHGEF11O15085 1522 aa17.33■□□□□ 0.37
PDE4D-206ENST00000405053 ARAP1Q96P48 1450 aa17.31■□□□□ 0.36
PDE4D-206ENST00000405053 FHOD3Q2V2M9 1422 aa17.3■□□□□ 0.36
PDE4D-206ENST00000405053 P3H3Q8IVL6 736 aa17.29■□□□□ 0.36
PDE4D-206ENST00000405053 RIMBP3CA6NJZ7 1639 aa17.28■□□□□ 0.36
PDE4D-206ENST00000405053 RIMBP3BA6NNM3 1639 aa17.28■□□□□ 0.36
PDE4D-206ENST00000405053 RIMBP3Q9UFD9 1639 aa17.28■□□□□ 0.36
PDE4D-206ENST00000405053 PTPRGP23470 1445 aa17.27■□□□□ 0.35
PDE4D-206ENST00000405053 FMN1Q68DA7 1419 aa17.25■□□□□ 0.35
PDE4D-206ENST00000405053 VPS8Q8N3P4 1428 aa17.2■□□□□ 0.34
PDE4D-206ENST00000405053 ABCA8O94911 1581 aa17.19■□□□□ 0.34
PDE4D-206ENST00000405053 UACAQ9BZF9 1416 aa17.18■□□□□ 0.34
PDE4D-206ENST00000405053 PLB1Q6P1J6 1458 aa17.18■□□□□ 0.34
PDE4D-206ENST00000405053 CASKIN1Q8WXD9 1431 aa17.17■□□□□ 0.34
PDE4D-206ENST00000405053 UHRF1BP1LA0JNW5 1464 aa17.17■□□□□ 0.34
PDE4D-206ENST00000405053 TTBK1Q5TCY1 1321 aaPredicted RBP17.16■□□□□ 0.34
PDE4D-206ENST00000405053 RAPGEF6Q8TEU7 1601 aa17.15■□□□□ 0.34
PDE4D-206ENST00000405053 FYCO1Q9BQS8 1478 aa17.14■□□□□ 0.33
PDE4D-206ENST00000405053 ABCC2Q92887 1545 aa17.14■□□□□ 0.33
PDE4D-206ENST00000405053 PCF11O94913 1555 aaKnown RBP17.13■□□□□ 0.33
PDE4D-206ENST00000405053 CYB5RLQ6IPT4 315 aa17.12■□□□□ 0.33
PDE4D-206ENST00000405053 NUP153P49790 1475 aaKnown RBP17.12■□□□□ 0.33
PDE4D-206ENST00000405053 HECW1Q76N89 1606 aa17.1■□□□□ 0.33
PDE4D-206ENST00000405053 ADCY10Q96PN6 1610 aa17.1■□□□□ 0.33
PDE4D-206ENST00000405053 KDM5BQ9UGL1 1544 aa17.07■□□□□ 0.32
PDE4D-206ENST00000405053 EPRSP07814 1512 aaKnown RBP17.06■□□□□ 0.32
PDE4D-206ENST00000405053 CCDC18Q5T9S5 1454 aa17.05■□□□□ 0.32
PDE4D-206ENST00000405053 ATP10BO94823 1461 aa17.05■□□□□ 0.32
PDE4D-206ENST00000405053 MAP3K1Q13233 1512 aa17.03■□□□□ 0.32
PDE4D-206ENST00000405053 LRRIQ1Q96JM4 1722 aa17.02■□□□□ 0.32
PDE4D-206ENST00000405053 ATP1B4Q9UN42 357 aaPredicted RBP17.02■□□□□ 0.32
PDE4D-206ENST00000405053 CDK13Q14004 1512 aaKnown RBP17.01■□□□□ 0.31
PDE4D-206ENST00000405053 ZCCHC11Q5TAX3 1644 aaKnown RBP17■□□□□ 0.31
PDE4D-206ENST00000405053 TIAM1Q13009 1591 aa16.98■□□□□ 0.31
PDE4D-206ENST00000405053 CFAP43Q8NDM7 1665 aa16.97■□□□□ 0.31
PDE4D-206ENST00000405053 NPM1P06748 294 aaKnown RBP eCLIP16.97■□□□□ 0.31
PDE4D-206ENST00000405053 ARID3CA6NKF2 412 aa16.96■□□□□ 0.31
PDE4D-206ENST00000405053 APLP2Q06481 763 aa16.95■□□□□ 0.3
PDE4D-206ENST00000405053 CDK11AQ9UQ88 783 aaPredicted RBP16.95■□□□□ 0.3
PDE4D-206ENST00000405053 MAPKBP1O60336 1514 aa16.95■□□□□ 0.3
PDE4D-206ENST00000405053 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.93■□□□□ 0.3
PDE4D-206ENST00000405053 HNRNPUL2Q1KMD3 747 aaKnown RBP16.93■□□□□ 0.3
PDE4D-206ENST00000405053 PLEKHD1A6NEE1 506 aa16.92■□□□□ 0.3
PDE4D-206ENST00000405053 ASXL2Q76L83 1435 aa16.92■□□□□ 0.3
PDE4D-206ENST00000405053 LRRC9Q6ZRR7 1453 aa16.92■□□□□ 0.3
PDE4D-206ENST00000405053 MAGI3Q5TCQ9 1506 aa16.91■□□□□ 0.3
PDE4D-206ENST00000405053 TROQ12816 1431 aaPredicted RBP16.91■□□□□ 0.3
PDE4D-206ENST00000405053 WDR7Q9Y4E6 1490 aa16.91■□□□□ 0.3
PDE4D-206ENST00000405053 KANK4Q5T7N3 995 aaPredicted RBP16.89■□□□□ 0.29
PDE4D-206ENST00000405053 EHBP1L1Q8N3D4 1523 aa16.89■□□□□ 0.29
PDE4D-206ENST00000405053 MTUS2Q5JR59 1369 aa16.89■□□□□ 0.29
PDE4D-206ENST00000405053 KIF14Q15058 1648 aa16.81■□□□□ 0.28
PDE4D-206ENST00000405053 ABCC10Q5T3U5 1492 aa16.81■□□□□ 0.28
PDE4D-206ENST00000405053 NCOA2Q15596 1464 aa16.8■□□□□ 0.28
PDE4D-206ENST00000405053 SUPT6HQ7KZ85 1726 aaKnown RBP16.79■□□□□ 0.28
PDE4D-206ENST00000405053 KCNH8Q96L42 1107 aa16.79■□□□□ 0.28
PDE4D-206ENST00000405053 GLI2P10070 1586 aa16.79■□□□□ 0.28
PDE4D-206ENST00000405053 DIP2BQ9P265 1576 aa16.78■□□□□ 0.28
PDE4D-206ENST00000405053 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.78■□□□□ 0.28
PDE4D-206ENST00000405053 ABCA9Q8IUA7 1624 aa16.77■□□□□ 0.27
PDE4D-206ENST00000405053 TTC37Q6PGP7 1564 aa16.75■□□□□ 0.27
PDE4D-206ENST00000405053 PPARGC1BQ86YN6 1023 aaKnown RBP16.74■□□□□ 0.27
PDE4D-206ENST00000405053 GPATCH8Q9UKJ3 1502 aaKnown RBP16.72■□□□□ 0.27
PDE4D-206ENST00000405053 FAM69CQ0P6D2 419 aa16.72■□□□□ 0.27
PDE4D-206ENST00000405053 PHLDB1Q86UU1 1377 aa16.72■□□□□ 0.27
PDE4D-206ENST00000405053 CCNB3Q8WWL7 1395 aa16.72■□□□□ 0.27
PDE4D-206ENST00000405053 ARAP3Q8WWN8 1544 aa16.71■□□□□ 0.27
PDE4D-206ENST00000405053 MAP3K4Q9Y6R4 1608 aa16.71■□□□□ 0.27
PDE4D-206ENST00000405053 KIF13AQ9H1H9 1805 aa16.71■□□□□ 0.27
PDE4D-206ENST00000405053 PLCH2O75038 1416 aa16.7■□□□□ 0.26
PDE4D-206ENST00000405053 MYOM3Q5VTT5 1437 aa16.7■□□□□ 0.26
PDE4D-206ENST00000405053 CD109Q6YHK3 1445 aa16.7■□□□□ 0.26
PDE4D-206ENST00000405053 CDC42BPAQ5VT25 1732 aa16.68■□□□□ 0.26
PDE4D-206ENST00000405053 PREX2Q70Z35 1606 aa16.68■□□□□ 0.26
PDE4D-206ENST00000405053 MYO5CQ9NQX4 1742 aa16.67■□□□□ 0.26
PDE4D-206ENST00000405053 ITSN2Q9NZM3 1697 aa16.67■□□□□ 0.26
PDE4D-206ENST00000405053 MIA2Q96PC5 1412 aa16.67■□□□□ 0.26
PDE4D-206ENST00000405053 CDC42BPBQ9Y5S2 1711 aa16.65■□□□□ 0.26
PDE4D-206ENST00000405053 FGD6Q6ZV73 1430 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms