RNA–Protein interactions for RNA: ENST00000403807.3

VPREB1-202, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPREB1, Length 755 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-202ENST00000403807 RIMBP3BA6NNM3 1639 aa22.66■■□□□ 1.22
VPREB1-202ENST00000403807 RIMBP3Q9UFD9 1639 aa22.66■■□□□ 1.22
VPREB1-202ENST00000403807 KIAA0586Q9BVV6 1533 aa22.64■■□□□ 1.21
VPREB1-202ENST00000403807 ARHGEF11O15085 1522 aa22.63■■□□□ 1.21
VPREB1-202ENST00000403807 CYB5RLQ6IPT4 315 aa22.54■■□□□ 1.2
VPREB1-202ENST00000403807 PRG4Q92954 1404 aaPredicted RBP22.54■■□□□ 1.2
VPREB1-202ENST00000403807 SHROOM2Q13796 1616 aa22.53■■□□□ 1.2
VPREB1-202ENST00000403807 IQGAP2Q13576 1575 aa22.48■■□□□ 1.19
VPREB1-202ENST00000403807 KIF21BO75037 1637 aa22.46■■□□□ 1.19
VPREB1-202ENST00000403807 ARAP1Q96P48 1450 aa22.46■■□□□ 1.19
VPREB1-202ENST00000403807 EHMT2Q96KQ7 1210 aa22.45■■□□□ 1.18
VPREB1-202ENST00000403807 ERCC6L2Q5T890 1561 aa22.45■■□□□ 1.18
VPREB1-202ENST00000403807 UBTFP17480 764 aaKnown RBP22.44■■□□□ 1.18
VPREB1-202ENST00000403807 CARMIL2Q6F5E8 1435 aa22.44■■□□□ 1.18
VPREB1-202ENST00000403807 GOLGA3Q08378 1498 aa22.41■■□□□ 1.18
VPREB1-202ENST00000403807 CTTNBP2Q8WZ74 1663 aa22.39■■□□□ 1.18
VPREB1-202ENST00000403807 UGGT2Q9NYU1 1516 aa22.39■■□□□ 1.17
VPREB1-202ENST00000403807 TNIKQ9UKE5 1360 aa22.34■■□□□ 1.17
VPREB1-202ENST00000403807 PTPRGP23470 1445 aa22.32■■□□□ 1.16
VPREB1-202ENST00000403807 DISP1Q96F81 1524 aa22.32■■□□□ 1.16
VPREB1-202ENST00000403807 TTBK1Q5TCY1 1321 aaPredicted RBP22.31■■□□□ 1.16
VPREB1-202ENST00000403807 RANGAP1P46060 587 aaPredicted RBP22.31■■□□□ 1.16
VPREB1-202ENST00000403807 TRHP20396 242 aaPredicted RBP22.3■■□□□ 1.16
VPREB1-202ENST00000403807 P3H3Q8IVL6 736 aa22.26■■□□□ 1.15
VPREB1-202ENST00000403807 KIAA0556O60303 1618 aa22.25■■□□□ 1.15
VPREB1-202ENST00000403807 NPM1P06748 294 aaKnown RBP eCLIP22.2■■□□□ 1.14
VPREB1-202ENST00000403807 LOC105371045A0A1W2PR82 267 aa22.16■■□□□ 1.14
VPREB1-202ENST00000403807 SAMD9Q5K651 1589 aa22.16■■□□□ 1.14
VPREB1-202ENST00000403807 UACAQ9BZF9 1416 aa22.15■■□□□ 1.14
VPREB1-202ENST00000403807 EFCAB5A4FU69 1503 aa22.13■■□□□ 1.13
VPREB1-202ENST00000403807 FHOD3Q2V2M9 1422 aa22.1■■□□□ 1.13
VPREB1-202ENST00000403807 UHRF1BP1LA0JNW5 1464 aa22.09■■□□□ 1.13
VPREB1-202ENST00000403807 ADCY10Q96PN6 1610 aa22.07■■□□□ 1.12
VPREB1-202ENST00000403807 PLB1Q6P1J6 1458 aa22.06■■□□□ 1.12
VPREB1-202ENST00000403807 ARHGAP35Q9NRY4 1499 aa22.06■■□□□ 1.12
VPREB1-202ENST00000403807 ABCC2Q92887 1545 aa22.06■■□□□ 1.12
VPREB1-202ENST00000403807 CLIP1P30622 1438 aa22.03■■□□□ 1.12
VPREB1-202ENST00000403807 ABCA8O94911 1581 aa22.01■■□□□ 1.11
VPREB1-202ENST00000403807 FMN1Q68DA7 1419 aa21.99■■□□□ 1.11
VPREB1-202ENST00000403807 KDM5BQ9UGL1 1544 aa21.97■■□□□ 1.11
VPREB1-202ENST00000403807 CEP162Q5TB80 1403 aa21.95■■□□□ 1.1
VPREB1-202ENST00000403807 ATP1B4Q9UN42 357 aaPredicted RBP21.94■■□□□ 1.1
VPREB1-202ENST00000403807 MAPKBP1O60336 1514 aa21.94■■□□□ 1.1
VPREB1-202ENST00000403807 ARID3CA6NKF2 412 aa21.93■■□□□ 1.1
VPREB1-202ENST00000403807 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.93■■□□□ 1.1
VPREB1-202ENST00000403807 HNRNPUL2Q1KMD3 747 aaKnown RBP21.93■■□□□ 1.1
VPREB1-202ENST00000403807 RAPGEF6Q8TEU7 1601 aa21.93■■□□□ 1.1
VPREB1-202ENST00000403807 ATP10BO94823 1461 aa21.9■■□□□ 1.1
VPREB1-202ENST00000403807 ASXL2Q76L83 1435 aa21.89■■□□□ 1.1
VPREB1-202ENST00000403807 FAM69CQ0P6D2 419 aa21.89■■□□□ 1.09
VPREB1-202ENST00000403807 ZCCHC11Q5TAX3 1644 aaKnown RBP21.88■■□□□ 1.09
VPREB1-202ENST00000403807 NUP153P49790 1475 aaKnown RBP21.87■■□□□ 1.09
VPREB1-202ENST00000403807 ABCC10Q5T3U5 1492 aa21.85■■□□□ 1.09
VPREB1-202ENST00000403807 PLEKHD1A6NEE1 506 aa21.82■■□□□ 1.08
VPREB1-202ENST00000403807 CASKIN1Q8WXD9 1431 aa21.81■■□□□ 1.08
VPREB1-202ENST00000403807 KCNH8Q96L42 1107 aa21.81■■□□□ 1.08
VPREB1-202ENST00000403807 WDR7Q9Y4E6 1490 aa21.8■■□□□ 1.08
VPREB1-202ENST00000403807 CDK11AQ9UQ88 783 aaPredicted RBP21.79■■□□□ 1.08
VPREB1-202ENST00000403807 HECW1Q76N89 1606 aa21.79■■□□□ 1.08
VPREB1-202ENST00000403807 EPRSP07814 1512 aaKnown RBP21.76■■□□□ 1.07
VPREB1-202ENST00000403807 DIP2BQ9P265 1576 aa21.75■■□□□ 1.07
VPREB1-202ENST00000403807 FYCO1Q9BQS8 1478 aa21.73■■□□□ 1.07
VPREB1-202ENST00000403807 PCF11O94913 1555 aaKnown RBP21.72■■□□□ 1.07
VPREB1-202ENST00000403807 CDK13Q14004 1512 aaKnown RBP21.71■■□□□ 1.07
VPREB1-202ENST00000403807 GLI2P10070 1586 aa21.71■■□□□ 1.07
VPREB1-202ENST00000403807 KIF13AQ9H1H9 1805 aa21.71■■□□□ 1.07
VPREB1-202ENST00000403807 CCDC18Q5T9S5 1454 aa21.7■■□□□ 1.06
VPREB1-202ENST00000403807 VPS8Q8N3P4 1428 aa21.68■■□□□ 1.06
VPREB1-202ENST00000403807 CD109Q6YHK3 1445 aa21.63■■□□□ 1.05
VPREB1-202ENST00000403807 TROQ12816 1431 aaPredicted RBP21.61■■□□□ 1.05
VPREB1-202ENST00000403807 LRRIQ1Q96JM4 1722 aa21.6■■□□□ 1.05
VPREB1-202ENST00000403807 AEBP2Q6ZN18 517 aaPredicted RBP21.59■■□□□ 1.05
VPREB1-202ENST00000403807 APLP2Q06481 763 aa21.57■■□□□ 1.04
VPREB1-202ENST00000403807 MAP3K4Q9Y6R4 1608 aa21.57■■□□□ 1.04
VPREB1-202ENST00000403807 CFAP43Q8NDM7 1665 aa21.56■■□□□ 1.04
VPREB1-202ENST00000403807 TSPOAP1O95153 1857 aa21.56■■□□□ 1.04
VPREB1-202ENST00000403807 TEX14Q8IWB6 1497 aa21.55■■□□□ 1.04
VPREB1-202ENST00000403807 ABCA9Q8IUA7 1624 aa21.55■■□□□ 1.04
VPREB1-202ENST00000403807 MTUS2Q5JR59 1369 aa21.54■■□□□ 1.04
VPREB1-202ENST00000403807 MAGI3Q5TCQ9 1506 aa21.54■■□□□ 1.04
VPREB1-202ENST00000403807 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.52■■□□□ 1.04
VPREB1-202ENST00000403807 KIF14Q15058 1648 aa21.48■■□□□ 1.03
VPREB1-202ENST00000403807 PPRC1Q5VV67 1664 aaKnown RBP21.48■■□□□ 1.03
VPREB1-202ENST00000403807 MAP3K1Q13233 1512 aa21.47■■□□□ 1.03
VPREB1-202ENST00000403807 PHLDB1Q86UU1 1377 aa21.47■■□□□ 1.03
VPREB1-202ENST00000403807 PLCH2O75038 1416 aa21.46■■□□□ 1.03
VPREB1-202ENST00000403807 TIAM1Q13009 1591 aa21.45■■□□□ 1.02
VPREB1-202ENST00000403807 EFCAB2Q5VUJ9 269 aa21.44■■□□□ 1.02
VPREB1-202ENST00000403807 TTC37Q6PGP7 1564 aa21.44■■□□□ 1.02
VPREB1-202ENST00000403807 KANK4Q5T7N3 995 aaPredicted RBP21.42■■□□□ 1.02
VPREB1-202ENST00000403807 EHBP1L1Q8N3D4 1523 aa21.42■■□□□ 1.02
VPREB1-202ENST00000403807 NEO1Q92859 1461 aa21.41■■□□□ 1.02
VPREB1-202ENST00000403807 LRRC9Q6ZRR7 1453 aa21.4■■□□□ 1.02
VPREB1-202ENST00000403807 FANCAO15360 1455 aa21.39■■□□□ 1.02
VPREB1-202ENST00000403807 CCNB3Q8WWL7 1395 aa21.39■■□□□ 1.02
VPREB1-202ENST00000403807 KDM6BO15054 1643 aa21.39■■□□□ 1.01
VPREB1-202ENST00000403807 AKNAQ7Z591 1439 aa21.38■■□□□ 1.01
VPREB1-202ENST00000403807 ARAP3Q8WWN8 1544 aa21.36■■□□□ 1.01
VPREB1-202ENST00000403807 COL17A1Q9UMD9 1497 aaPredicted RBP21.36■■□□□ 1.01
VPREB1-202ENST00000403807 CFDP1Q9UEE9 299 aaPredicted RBP21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms