RNA–Protein interactions for RNA: ENST00000402934.5

LTBP1-201, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LTBP1, Length 4,948 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-201ENST00000402934 CCDC136Q96JN2 1154 aa11.45□□□□□ -0.58
LTBP1-201ENST00000402934 ANP32EQ9BTT0 268 aa11.43□□□□□ -0.58
LTBP1-201ENST00000402934 PDS5BQ9NTI5 1447 aa11.42□□□□□ -0.58
LTBP1-201ENST00000402934 CUX2O14529 1486 aa11.42□□□□□ -0.58
LTBP1-201ENST00000402934 UNC13AQ9UPW8 1703 aa11.39□□□□□ -0.59
LTBP1-201ENST00000402934 CDK11BP21127 795 aaKnown RBP11.39□□□□□ -0.59
LTBP1-201ENST00000402934 ESF1Q9H501 851 aaKnown RBP11.39□□□□□ -0.59
LTBP1-201ENST00000402934 TMC1Q8TDI8 760 aa11.39□□□□□ -0.59
LTBP1-201ENST00000402934 FAM9BQ8IZU0 186 aa11.37□□□□□ -0.59
LTBP1-201ENST00000402934 HMGXB3Q12766 1538 aa11.37□□□□□ -0.59
LTBP1-201ENST00000402934 CARMIL1Q5VZK9 1371 aa11.37□□□□□ -0.59
LTBP1-201ENST00000402934 ERCC6Q03468 1493 aa11.37□□□□□ -0.59
LTBP1-201ENST00000402934 ZNF777Q9ULD5 760 aaPredicted RBP11.36□□□□□ -0.59
LTBP1-201ENST00000402934 CHMP7Q8WUX9 453 aaPredicted RBP11.35□□□□□ -0.59
LTBP1-201ENST00000402934 DDX10Q13206 875 aaKnown RBP11.34□□□□□ -0.59
LTBP1-201ENST00000402934 NBR1Q14596 966 aa11.34□□□□□ -0.59
LTBP1-201ENST00000402934 TNNT2P45379 298 aaPredicted RBP11.34□□□□□ -0.59
LTBP1-201ENST00000402934 WDR43Q15061 677 aaKnown RBP eCLIP11.34□□□□□ -0.59
LTBP1-201ENST00000402934 DDRGK1Q96HY6 314 aa11.34□□□□□ -0.59
LTBP1-201ENST00000402934 BECN1Q14457 450 aa11.34□□□□□ -0.59
LTBP1-201ENST00000402934 MYH16Q9H6N6 1097 aa11.33□□□□□ -0.6
LTBP1-201ENST00000402934 FANCD2Q9BXW9 1451 aa11.33□□□□□ -0.6
LTBP1-201ENST00000402934 STAG3Q9UJ98 1225 aa11.33□□□□□ -0.6
LTBP1-201ENST00000402934 TRIM44Q96DX7 344 aaPredicted RBP11.33□□□□□ -0.6
LTBP1-201ENST00000402934 ARID3CA6NKF2 412 aa11.32□□□□□ -0.6
LTBP1-201ENST00000402934 NCLP19338 710 aaKnown RBP11.32□□□□□ -0.6
LTBP1-201ENST00000402934 PEG3Q9GZU2 1588 aa11.32□□□□□ -0.6
LTBP1-201ENST00000402934 GOLGA6L22H0YM25 854 aa11.32□□□□□ -0.6
LTBP1-201ENST00000402934 CFTRP13569 1480 aa11.3□□□□□ -0.6
LTBP1-201ENST00000402934 RUSC2Q8N2Y8 1516 aa11.3□□□□□ -0.6
LTBP1-201ENST00000402934 CHGAP10645 457 aaKnown RBP11.3□□□□□ -0.6
LTBP1-201ENST00000402934 MRS2Q9HD23 443 aa11.29□□□□□ -0.6
LTBP1-201ENST00000402934 CC2D2AQ9P2K1 1620 aa11.29□□□□□ -0.6
LTBP1-201ENST00000402934 SALL2Q9Y467 1007 aaPredicted RBP11.27□□□□□ -0.61
LTBP1-201ENST00000402934 ARXQ96QS3 562 aa11.27□□□□□ -0.61
LTBP1-201ENST00000402934 MTUS2Q5JR59 1369 aa11.26□□□□□ -0.61
LTBP1-201ENST00000402934 VPS8Q8N3P4 1428 aa11.26□□□□□ -0.61
LTBP1-201ENST00000402934 ERICH6BQ5W0A0 696 aa11.26□□□□□ -0.61
LTBP1-201ENST00000402934 TDRD9Q8NDG6 1382 aaKnown RBP11.25□□□□□ -0.61
LTBP1-201ENST00000402934 RAPGEF2Q9Y4G8 1499 aa11.25□□□□□ -0.61
LTBP1-201ENST00000402934 FHAD1B1AJZ9 1412 aa11.23□□□□□ -0.61
LTBP1-201ENST00000402934 PPM1GO15355 546 aaPredicted RBP11.23□□□□□ -0.61
LTBP1-201ENST00000402934 ZRSR1Q15695 479 aaKnown RBP11.21□□□□□ -0.61
LTBP1-201ENST00000402934 SYNJ1O43426 1573 aa11.21□□□□□ -0.61
LTBP1-201ENST00000402934 FGD5Q6ZNL6 1462 aa11.21□□□□□ -0.61
LTBP1-201ENST00000402934 NPM1P06748 294 aaKnown RBP eCLIP11.21□□□□□ -0.61
LTBP1-201ENST00000402934 TSPY4P0CV99 314 aa11.21□□□□□ -0.62
LTBP1-201ENST00000402934 TSPY10P0CW01 314 aa11.21□□□□□ -0.62
LTBP1-201ENST00000402934 PTMAP06454 111 aaKnown RBP11.19□□□□□ -0.62
LTBP1-201ENST00000402934 EIF4G2P78344 907 aaKnown RBP eCLIP11.18□□□□□ -0.62
LTBP1-201ENST00000402934 IGF1RP08069 1367 aa11.17□□□□□ -0.62
LTBP1-201ENST00000402934 TOP2BQ02880 1626 aa11.17□□□□□ -0.62
LTBP1-201ENST00000402934 CASC1Q6TDU7 716 aa11.16□□□□□ -0.62
LTBP1-201ENST00000402934 DNTTIP2Q5QJE6 756 aaKnown RBP11.15□□□□□ -0.62
LTBP1-201ENST00000402934 CUX1P39880 1505 aa11.14□□□□□ -0.63
LTBP1-201ENST00000402934 RAD54L2Q9Y4B4 1467 aa11.14□□□□□ -0.63
LTBP1-201ENST00000402934 NESP48681 1621 aa11.14□□□□□ -0.63
LTBP1-201ENST00000402934 CFAP53Q96M91 514 aa11.13□□□□□ -0.63
LTBP1-201ENST00000402934 CDCA8Q53HL2 280 aa11.12□□□□□ -0.63
LTBP1-201ENST00000402934 MIER1Q8N108 512 aa11.12□□□□□ -0.63
LTBP1-201ENST00000402934 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.12□□□□□ -0.63
LTBP1-201ENST00000402934 NRDCO43847 1150 aa11.12□□□□□ -0.63
LTBP1-201ENST00000402934 KIF21BO75037 1637 aa11.12□□□□□ -0.63
LTBP1-201ENST00000402934 KDM2AQ9Y2K7 1162 aa11.11□□□□□ -0.63
LTBP1-201ENST00000402934 CHMP4BQ9H444 224 aaKnown RBP11.11□□□□□ -0.63
LTBP1-201ENST00000402934 CHIC2Q9UKJ5 165 aa11.11□□□□□ -0.63
LTBP1-201ENST00000402934 FMN1Q68DA7 1419 aa11.11□□□□□ -0.63
LTBP1-201ENST00000402934 IRX6P78412 446 aaPredicted RBP11.11□□□□□ -0.63
LTBP1-201ENST00000402934 PLEKHD1A6NEE1 506 aa11.1□□□□□ -0.63
LTBP1-201ENST00000402934 SCAF1Q9H7N4 1312 aaKnown RBP11.1□□□□□ -0.63
LTBP1-201ENST00000402934 GAPVD1Q14C86 1478 aa11.1□□□□□ -0.63
LTBP1-201ENST00000402934 CCNB3Q8WWL7 1395 aa11.1□□□□□ -0.63
LTBP1-201ENST00000402934 KANK4Q5T7N3 995 aaPredicted RBP11.09□□□□□ -0.63
LTBP1-201ENST00000402934 GOLGA6L6A8MZA4 724 aa11.09□□□□□ -0.63
LTBP1-201ENST00000402934 ERICH3Q5RHP9 1530 aa11.08□□□□□ -0.64
LTBP1-201ENST00000402934 TOPBP1Q92547 1522 aa11.08□□□□□ -0.64
LTBP1-201ENST00000402934 NAP1L5Q96NT1 182 aaPredicted RBP11.07□□□□□ -0.64
LTBP1-201ENST00000402934 MS4A1P11836 297 aa11.06□□□□□ -0.64
LTBP1-201ENST00000402934 PRXQ9BXM0 1461 aa11.06□□□□□ -0.64
LTBP1-201ENST00000402934 FHOD3Q2V2M9 1422 aa11.06□□□□□ -0.64
LTBP1-201ENST00000402934 FTSJ3Q8IY81 847 aaKnown RBP11.06□□□□□ -0.64
LTBP1-201ENST00000402934 LAMC3Q9Y6N6 1575 aa11.05□□□□□ -0.64
LTBP1-201ENST00000402934 DNMBPQ6XZF7 1577 aa11.05□□□□□ -0.64
LTBP1-201ENST00000402934 PPP4R2Q9NY27 417 aa11.05□□□□□ -0.64
LTBP1-201ENST00000402934 CARMIL2Q6F5E8 1435 aa11.05□□□□□ -0.64
LTBP1-201ENST00000402934 POLA1P09884 1462 aaPredicted RBP11.04□□□□□ -0.64
LTBP1-201ENST00000402934 MRC2Q9UBG0 1479 aa11.04□□□□□ -0.64
LTBP1-201ENST00000402934 KNSTRNQ9Y448 316 aa11.03□□□□□ -0.64
LTBP1-201ENST00000402934 CHAF1AQ13111 956 aaPredicted RBP11.03□□□□□ -0.64
LTBP1-201ENST00000402934 ARHGAP35Q9NRY4 1499 aa11.03□□□□□ -0.64
LTBP1-201ENST00000402934 CFDP1Q9UEE9 299 aaPredicted RBP11.02□□□□□ -0.64
LTBP1-201ENST00000402934 RRP7BPQ9NSQ0 103 aa11.02□□□□□ -0.65
LTBP1-201ENST00000402934 NUDCQ9Y266 331 aa11.02□□□□□ -0.65
LTBP1-201ENST00000402934 NOP58Q9Y2X3 529 aaKnown RBP11.01□□□□□ -0.65
LTBP1-201ENST00000402934 CFAP44Q96MT7 982 aa11□□□□□ -0.65
LTBP1-201ENST00000402934 PPP1R15AO75807 674 aaPredicted RBP11□□□□□ -0.65
LTBP1-201ENST00000402934 L1TD1Q5T7N2 865 aaKnown RBP11□□□□□ -0.65
LTBP1-201ENST00000402934 A0A0G2JS52 829 aa11□□□□□ -0.65
LTBP1-201ENST00000402934 DNAJC5BQ9UF47 199 aa11□□□□□ -0.65
LTBP1-201ENST00000402934 SUPT16HQ9Y5B9 1047 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms