RNA–Protein interactions for RNA: ENST00000402802.7

PDGFA-203, Transcript of platelet derived growth factor subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFA, Length 2,305 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-203ENST00000402802 CUL7Q14999 1698 aa24.34■■□□□ 1.49
PDGFA-203ENST00000402802 GTF3C3Q9Y5Q9 886 aa24.32■■□□□ 1.48
PDGFA-203ENST00000402802 CENPBP07199 599 aaPredicted RBP24.3■■□□□ 1.48
PDGFA-203ENST00000402802 PBRM1Q86U86 1689 aa24.3■■□□□ 1.48
PDGFA-203ENST00000402802 ARAP1Q96P48 1450 aa24.26■■□□□ 1.47
PDGFA-203ENST00000402802 GRIN2BQ13224 1484 aa24.24■■□□□ 1.47
PDGFA-203ENST00000402802 EIF4G3O43432 1585 aaKnown RBP24.24■■□□□ 1.47
PDGFA-203ENST00000402802 ARHGAP35Q9NRY4 1499 aa24.24■■□□□ 1.47
PDGFA-203ENST00000402802 VPS8Q8N3P4 1428 aa24.23■■□□□ 1.47
PDGFA-203ENST00000402802 P3H3Q8IVL6 736 aa24.2■■□□□ 1.46
PDGFA-203ENST00000402802 ADAMTS12P58397 1594 aa24.18■■□□□ 1.46
PDGFA-203ENST00000402802 FHAD1B1AJZ9 1412 aa24.17■■□□□ 1.46
PDGFA-203ENST00000402802 SNAPC4Q5SXM2 1469 aa24.17■■□□□ 1.46
PDGFA-203ENST00000402802 CTTNBP2Q8WZ74 1663 aa24.12■■□□□ 1.45
PDGFA-203ENST00000402802 DIEXFQ68CQ4 756 aaKnown RBP24.07■■□□□ 1.44
PDGFA-203ENST00000402802 FBLN2P98095 1184 aa24.06■■□□□ 1.44
PDGFA-203ENST00000402802 FHOD3Q2V2M9 1422 aa24.06■■□□□ 1.44
PDGFA-203ENST00000402802 APLP2Q06481 763 aa24.04■■□□□ 1.44
PDGFA-203ENST00000402802 CHMP7Q8WUX9 453 aaPredicted RBP24■■□□□ 1.43
PDGFA-203ENST00000402802 GRIN2AQ12879 1464 aa23.98■■□□□ 1.43
PDGFA-203ENST00000402802 MAGI1Q96QZ7 1491 aaPredicted RBP23.98■■□□□ 1.43
PDGFA-203ENST00000402802 KANK4Q5T7N3 995 aaPredicted RBP23.95■■□□□ 1.42
PDGFA-203ENST00000402802 ATP1B4Q9UN42 357 aaPredicted RBP23.94■■□□□ 1.42
PDGFA-203ENST00000402802 SYNJ2O15056 1496 aa23.94■■□□□ 1.42
PDGFA-203ENST00000402802 EFCAB5A4FU69 1503 aa23.93■■□□□ 1.42
PDGFA-203ENST00000402802 CCER1Q8TC90 406 aaPredicted RBP23.93■■□□□ 1.42
PDGFA-203ENST00000402802 IQGAP2Q13576 1575 aa23.92■■□□□ 1.42
PDGFA-203ENST00000402802 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.9■■□□□ 1.42
PDGFA-203ENST00000402802 SAMD9Q5K651 1589 aa23.89■■□□□ 1.41
PDGFA-203ENST00000402802 PCF11O94913 1555 aaKnown RBP23.88■■□□□ 1.41
PDGFA-203ENST00000402802 CEP170Q5SW79 1584 aa23.87■■□□□ 1.41
PDGFA-203ENST00000402802 KIAA0586Q9BVV6 1533 aa23.84■■□□□ 1.41
PDGFA-203ENST00000402802 FMN1Q68DA7 1419 aa23.77■■□□□ 1.4
PDGFA-203ENST00000402802 UGGT2Q9NYU1 1516 aa23.76■■□□□ 1.39
PDGFA-203ENST00000402802 NUP160Q12769 1436 aa23.76■■□□□ 1.39
PDGFA-203ENST00000402802 TIAM1Q13009 1591 aa23.75■■□□□ 1.39
PDGFA-203ENST00000402802 CASKIN1Q8WXD9 1431 aa23.75■■□□□ 1.39
PDGFA-203ENST00000402802 DISP1Q96F81 1524 aa23.74■■□□□ 1.39
PDGFA-203ENST00000402802 FYCO1Q9BQS8 1478 aa23.73■■□□□ 1.39
PDGFA-203ENST00000402802 CHD1O14646 1710 aa23.71■■□□□ 1.39
PDGFA-203ENST00000402802 ARID3CA6NKF2 412 aa23.7■■□□□ 1.38
PDGFA-203ENST00000402802 JPH4Q96JJ6 628 aa23.7■■□□□ 1.38
PDGFA-203ENST00000402802 KIAA0556O60303 1618 aa23.69■■□□□ 1.38
PDGFA-203ENST00000402802 LRRC9Q6ZRR7 1453 aa23.67■■□□□ 1.38
PDGFA-203ENST00000402802 CFAP43Q8NDM7 1665 aa23.65■■□□□ 1.38
PDGFA-203ENST00000402802 LRRIQ1Q96JM4 1722 aa23.65■■□□□ 1.38
PDGFA-203ENST00000402802 HNRNPUL2Q1KMD3 747 aaKnown RBP23.65■■□□□ 1.38
PDGFA-203ENST00000402802 MAP3K1Q13233 1512 aa23.64■■□□□ 1.38
PDGFA-203ENST00000402802 ZNF316A6NFI3 1004 aaPredicted RBP23.63■■□□□ 1.37
PDGFA-203ENST00000402802 PHLDB1Q86UU1 1377 aa23.55■■□□□ 1.36
PDGFA-203ENST00000402802 CDK13Q14004 1512 aaKnown RBP23.54■■□□□ 1.36
PDGFA-203ENST00000402802 CARMIL2Q6F5E8 1435 aa23.53■■□□□ 1.36
PDGFA-203ENST00000402802 PRG4Q92954 1404 aaPredicted RBP23.53■■□□□ 1.36
PDGFA-203ENST00000402802 HECW1Q76N89 1606 aa23.52■■□□□ 1.36
PDGFA-203ENST00000402802 MTUS2Q5JR59 1369 aa23.52■■□□□ 1.36
PDGFA-203ENST00000402802 YTHDC1Q96MU7 727 aaKnown RBP23.51■■□□□ 1.35
PDGFA-203ENST00000402802 PLB1Q6P1J6 1458 aa23.51■■□□□ 1.35
PDGFA-203ENST00000402802 EPRSP07814 1512 aaKnown RBP23.5■■□□□ 1.35
PDGFA-203ENST00000402802 MAGI3Q5TCQ9 1506 aa23.49■■□□□ 1.35
PDGFA-203ENST00000402802 RRBP1Q9P2E9 1410 aaKnown RBP23.49■■□□□ 1.35
PDGFA-203ENST00000402802 ITGAEP38570 1179 aa23.48■■□□□ 1.35
PDGFA-203ENST00000402802 CCNB3Q8WWL7 1395 aa23.47■■□□□ 1.35
PDGFA-203ENST00000402802 NUP153P49790 1475 aaKnown RBP23.46■■□□□ 1.35
PDGFA-203ENST00000402802 RAPGEF6Q8TEU7 1601 aa23.45■■□□□ 1.35
PDGFA-203ENST00000402802 CCDC18Q5T9S5 1454 aa23.44■■□□□ 1.34
PDGFA-203ENST00000402802 ERCC6L2Q5T890 1561 aa23.44■■□□□ 1.34
PDGFA-203ENST00000402802 FAM50AQ14320 339 aaKnown RBP23.41■■□□□ 1.34
PDGFA-203ENST00000402802 MIER1Q8N108 512 aa23.39■■□□□ 1.34
PDGFA-203ENST00000402802 CLSPNQ9HAW4 1339 aa23.39■■□□□ 1.33
PDGFA-203ENST00000402802 SHROOM2Q13796 1616 aa23.39■■□□□ 1.33
PDGFA-203ENST00000402802 NCOA2Q15596 1464 aa23.38■■□□□ 1.33
PDGFA-203ENST00000402802 CLASP1Q7Z460 1538 aa23.38■■□□□ 1.33
PDGFA-203ENST00000402802 EHBP1L1Q8N3D4 1523 aa23.38■■□□□ 1.33
PDGFA-203ENST00000402802 PTPRGP23470 1445 aa23.37■■□□□ 1.33
PDGFA-203ENST00000402802 SUPT6HQ7KZ85 1726 aaKnown RBP23.32■■□□□ 1.32
PDGFA-203ENST00000402802 ABCA8O94911 1581 aa23.32■■□□□ 1.32
PDGFA-203ENST00000402802 BCL11AQ9H165 835 aa23.31■■□□□ 1.32
PDGFA-203ENST00000402802 FGD6Q6ZV73 1430 aa23.29■■□□□ 1.32
PDGFA-203ENST00000402802 ANP32EQ9BTT0 268 aa23.28■■□□□ 1.32
PDGFA-203ENST00000402802 MYOM3Q5VTT5 1437 aa23.26■■□□□ 1.31
PDGFA-203ENST00000402802 ARHGEF11O15085 1522 aa23.26■■□□□ 1.31
PDGFA-203ENST00000402802 ATP10BO94823 1461 aa23.25■■□□□ 1.31
PDGFA-203ENST00000402802 CDK11AQ9UQ88 783 aaPredicted RBP23.23■■□□□ 1.31
PDGFA-203ENST00000402802 UACAQ9BZF9 1416 aa23.2■■□□□ 1.31
PDGFA-203ENST00000402802 OSCARQ8IYS5 282 aa23.2■■□□□ 1.3
PDGFA-203ENST00000402802 TROQ12816 1431 aaPredicted RBP23.19■■□□□ 1.3
PDGFA-203ENST00000402802 SUPT16HQ9Y5B9 1047 aaKnown RBP23.17■■□□□ 1.3
PDGFA-203ENST00000402802 KIF14Q15058 1648 aa23.17■■□□□ 1.3
PDGFA-203ENST00000402802 PLEKHD1A6NEE1 506 aa23.15■■□□□ 1.3
PDGFA-203ENST00000402802 PTPN23Q9H3S7 1636 aa23.15■■□□□ 1.3
PDGFA-203ENST00000402802 PTPRKQ15262 1439 aa23.13■■□□□ 1.29
PDGFA-203ENST00000402802 ZNF644Q9H582 1327 aaPredicted RBP23.12■■□□□ 1.29
PDGFA-203ENST00000402802 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.11■■□□□ 1.292e-6■■■■□ 19.8
PDGFA-203ENST00000402802 TSHZ2Q9NRE2 1034 aa23.11■■□□□ 1.29
PDGFA-203ENST00000402802 ABCC2Q92887 1545 aa23.1■■□□□ 1.29
PDGFA-203ENST00000402802 RAB3GAP2Q9H2M9 1393 aa23.09■■□□□ 1.29
PDGFA-203ENST00000402802 CHIC2Q9UKJ5 165 aa23.07■■□□□ 1.28
PDGFA-203ENST00000402802 TCOF1Q13428 1488 aaKnown RBP23.05■■□□□ 1.28
PDGFA-203ENST00000402802 PRKCSHP14314 528 aaPredicted RBP23.04■■□□□ 1.28
PDGFA-203ENST00000402802 ZNF777Q9ULD5 760 aaPredicted RBP23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms