RNA–Protein interactions for RNA: ENST00000402583.5

CBX1-203, Transcript of chromobox 1, humanhuman

TSL 4

Gene CBX1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-203ENST00000402583 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.07□□□□□ -0.16
CBX1-203ENST00000402583 ABCA10Q8WWZ4 1543 aa14.06□□□□□ -0.16
CBX1-203ENST00000402583 PDS5BQ9NTI5 1447 aa14.06□□□□□ -0.16
CBX1-203ENST00000402583 ZBTB22O15209 634 aa14.05□□□□□ -0.16
CBX1-203ENST00000402583 DCAF8L1A6NGE4 600 aa14.03□□□□□ -0.16
CBX1-203ENST00000402583 NESP48681 1621 aa14.03□□□□□ -0.16
CBX1-203ENST00000402583 POLA1P09884 1462 aaPredicted RBP14.02□□□□□ -0.16
CBX1-203ENST00000402583 FOXD4L1Q9NU39 408 aa14.02□□□□□ -0.17
CBX1-203ENST00000402583 ARHGAP35Q9NRY4 1499 aa14.01□□□□□ -0.17
CBX1-203ENST00000402583 CUL7Q14999 1698 aa13.99□□□□□ -0.17
CBX1-203ENST00000402583 RAD54L2Q9Y4B4 1467 aa13.98□□□□□ -0.17
CBX1-203ENST00000402583 SLC4A2P04920 1241 aa13.97□□□□□ -0.17
CBX1-203ENST00000402583 MAP3K1Q13233 1512 aa13.96□□□□□ -0.17
CBX1-203ENST00000402583 URB2Q14146 1524 aaKnown RBP13.96□□□□□ -0.17
CBX1-203ENST00000402583 FHAD1B1AJZ9 1412 aa13.95□□□□□ -0.18
CBX1-203ENST00000402583 HNRNPUL2Q1KMD3 747 aaKnown RBP13.94□□□□□ -0.18
CBX1-203ENST00000402583 EFCAB5A4FU69 1503 aa13.92□□□□□ -0.18
CBX1-203ENST00000402583 WDR97A6NE52 1622 aa13.92□□□□□ -0.18
CBX1-203ENST00000402583 RRBP1Q9P2E9 1410 aaKnown RBP13.9□□□□□ -0.19
CBX1-203ENST00000402583 KANK4Q5T7N3 995 aaPredicted RBP13.88□□□□□ -0.19
CBX1-203ENST00000402583 ABCA5Q8WWZ7 1642 aa13.88□□□□□ -0.19
CBX1-203ENST00000402583 TIAM1Q13009 1591 aa13.88□□□□□ -0.19
CBX1-203ENST00000402583 GAPVD1Q14C86 1478 aa13.87□□□□□ -0.19
CBX1-203ENST00000402583 POTEDQ86YR6 584 aa13.85□□□□□ -0.19
CBX1-203ENST00000402583 CLSPNQ9HAW4 1339 aa13.85□□□□□ -0.19
CBX1-203ENST00000402583 CTTNBP2Q8WZ74 1663 aa13.85□□□□□ -0.19
CBX1-203ENST00000402583 AQRO60306 1485 aaKnown RBP eCLIP13.84□□□□□ -0.194e-6■■■□□ 16.4
CBX1-203ENST00000402583 KIF21AQ7Z4S6 1674 aa13.84□□□□□ -0.19
CBX1-203ENST00000402583 CCNB3Q8WWL7 1395 aa13.83□□□□□ -0.19
CBX1-203ENST00000402583 LRRC9Q6ZRR7 1453 aa13.82□□□□□ -0.2
CBX1-203ENST00000402583 FYCO1Q9BQS8 1478 aa13.82□□□□□ -0.2
CBX1-203ENST00000402583 MRC2Q9UBG0 1479 aa13.82□□□□□ -0.2
CBX1-203ENST00000402583 TDRD9Q8NDG6 1382 aaKnown RBP13.82□□□□□ -0.2
CBX1-203ENST00000402583 FMN1Q68DA7 1419 aa13.81□□□□□ -0.2
CBX1-203ENST00000402583 CASKIN1Q8WXD9 1431 aa13.81□□□□□ -0.2
CBX1-203ENST00000402583 CFAP43Q8NDM7 1665 aa13.8□□□□□ -0.2
CBX1-203ENST00000402583 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.8□□□□□ -0.21e-7■■□□□ 14.1
CBX1-203ENST00000402583 TARBP1Q13395 1621 aaKnown RBP13.79□□□□□ -0.2
CBX1-203ENST00000402583 PCF11O94913 1555 aaKnown RBP13.79□□□□□ -0.2
CBX1-203ENST00000402583 FHOD3Q2V2M9 1422 aa13.78□□□□□ -0.2
CBX1-203ENST00000402583 P3H3Q8IVL6 736 aa13.75□□□□□ -0.21
CBX1-203ENST00000402583 SAMD9Q5K651 1589 aa13.75□□□□□ -0.21
CBX1-203ENST00000402583 ZNF316A6NFI3 1004 aaPredicted RBP13.74□□□□□ -0.21
CBX1-203ENST00000402583 MYCNP04198 464 aaPredicted RBP13.73□□□□□ -0.21
CBX1-203ENST00000402583 IFT140Q96RY7 1462 aa13.73□□□□□ -0.21
CBX1-203ENST00000402583 DIEXFQ68CQ4 756 aaKnown RBP13.72□□□□□ -0.21
CBX1-203ENST00000402583 ATP1B4Q9UN42 357 aaPredicted RBP13.72□□□□□ -0.21
CBX1-203ENST00000402583 GRIN2BQ13224 1484 aa13.72□□□□□ -0.21
CBX1-203ENST00000402583 DHX57Q6P158 1386 aaKnown RBP13.71□□□□□ -0.21
CBX1-203ENST00000402583 THOC2Q8NI27 1593 aaKnown RBP13.71□□□□□ -0.21
CBX1-203ENST00000402583 PBRM1Q86U86 1689 aa13.71□□□□□ -0.21
CBX1-203ENST00000402583 WDR62O43379 1518 aa13.7□□□□□ -0.22
CBX1-203ENST00000402583 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.7□□□□□ -0.22
CBX1-203ENST00000402583 SNAPC4Q5SXM2 1469 aa13.69□□□□□ -0.22
CBX1-203ENST00000402583 ADAMTS12P58397 1594 aa13.69□□□□□ -0.22
CBX1-203ENST00000402583 PHLDB1Q86UU1 1377 aa13.68□□□□□ -0.22
CBX1-203ENST00000402583 IQGAP2Q13576 1575 aa13.65□□□□□ -0.22
CBX1-203ENST00000402583 SETD5Q9C0A6 1442 aa13.64□□□□□ -0.23
CBX1-203ENST00000402583 CCDC18Q5T9S5 1454 aa13.64□□□□□ -0.23
CBX1-203ENST00000402583 MTUS2Q5JR59 1369 aa13.64□□□□□ -0.23
CBX1-203ENST00000402583 ITGAEP38570 1179 aa13.64□□□□□ -0.23
CBX1-203ENST00000402583 FAM50AQ14320 339 aaKnown RBP13.64□□□□□ -0.23
CBX1-203ENST00000402583 ERCC6Q03468 1493 aa13.62□□□□□ -0.23
CBX1-203ENST00000402583 RAB3GAP2Q9H2M9 1393 aa13.62□□□□□ -0.23
CBX1-203ENST00000402583 EHBP1L1Q8N3D4 1523 aa13.61□□□□□ -0.23
CBX1-203ENST00000402583 HECW1Q76N89 1606 aa13.61□□□□□ -0.23
CBX1-203ENST00000402583 FGD6Q6ZV73 1430 aa13.59□□□□□ -0.23
CBX1-203ENST00000402583 U3KPZ7 1027 aaPredicted RBP13.59□□□□□ -0.23
CBX1-203ENST00000402583 UGGT2Q9NYU1 1516 aa13.59□□□□□ -0.23
CBX1-203ENST00000402583 KIAA0586Q9BVV6 1533 aa13.57□□□□□ -0.24
CBX1-203ENST00000402583 SUPT6HQ7KZ85 1726 aaKnown RBP13.56□□□□□ -0.24
CBX1-203ENST00000402583 ZNF608Q9ULD9 1512 aaPredicted RBP13.56□□□□□ -0.24
CBX1-203ENST00000402583 MYOM3Q5VTT5 1437 aa13.56□□□□□ -0.24
CBX1-203ENST00000402583 NCOA2Q15596 1464 aa13.55□□□□□ -0.24
CBX1-203ENST00000402583 ATXN8OSP0DMR3 200 aa13.55□□□□□ -0.24
CBX1-203ENST00000402583 MAGI1Q96QZ7 1491 aaPredicted RBP13.55□□□□□ -0.24
CBX1-203ENST00000402583 EIF4G3O43432 1585 aaKnown RBP13.54□□□□□ -0.24
CBX1-203ENST00000402583 CENPBP07199 599 aaPredicted RBP13.53□□□□□ -0.24
CBX1-203ENST00000402583 GRIN2AQ12879 1464 aa13.53□□□□□ -0.24
CBX1-203ENST00000402583 TIMELESSQ9UNS1 1208 aa13.52□□□□□ -0.25
CBX1-203ENST00000402583 EPRSP07814 1512 aaKnown RBP13.51□□□□□ -0.25
CBX1-203ENST00000402583 ARHGEF11O15085 1522 aa13.5□□□□□ -0.25
CBX1-203ENST00000402583 MAPKBP1O60336 1514 aa13.49□□□□□ -0.25
CBX1-203ENST00000402583 SYNJ2O15056 1496 aa13.49□□□□□ -0.25
CBX1-203ENST00000402583 SAMD1Q6SPF0 538 aaPredicted RBP13.49□□□□□ -0.25
CBX1-203ENST00000402583 LRRIQ1Q96JM4 1722 aa13.49□□□□□ -0.25
CBX1-203ENST00000402583 KIAA0556O60303 1618 aa13.49□□□□□ -0.25
CBX1-203ENST00000402583 HFM1A2PYH4 1435 aa13.47□□□□□ -0.25
CBX1-203ENST00000402583 CHMP7Q8WUX9 453 aaPredicted RBP13.47□□□□□ -0.25
CBX1-203ENST00000402583 TCOF1Q13428 1488 aaKnown RBP13.47□□□□□ -0.25
CBX1-203ENST00000402583 MIA2Q96PC5 1412 aa13.47□□□□□ -0.25
CBX1-203ENST00000402583 PTPN23Q9H3S7 1636 aa13.46□□□□□ -0.25
CBX1-203ENST00000402583 ACIN1Q9UKV3 1341 aaKnown RBP13.46□□□□□ -0.25
CBX1-203ENST00000402583 DISP1Q96F81 1524 aa13.46□□□□□ -0.25
CBX1-203ENST00000402583 CDK11AQ9UQ88 783 aaPredicted RBP13.46□□□□□ -0.25
CBX1-203ENST00000402583 MAGI3Q5TCQ9 1506 aa13.44□□□□□ -0.26
CBX1-203ENST00000402583 CARMIL2Q6F5E8 1435 aa13.44□□□□□ -0.26
CBX1-203ENST00000402583 UACAQ9BZF9 1416 aa13.43□□□□□ -0.26
CBX1-203ENST00000402583 AKNAQ7Z591 1439 aa13.42□□□□□ -0.26
CBX1-203ENST00000402583 RAPGEF6Q8TEU7 1601 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms