RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 PPARGC1BQ86YN6 1023 aaKnown RBP24.99■■□□□ 1.59
CHRFAM7A-203ENST00000401522 NUP160Q12769 1436 aa24.97■■□□□ 1.59
CHRFAM7A-203ENST00000401522 UBTFP17480 764 aaKnown RBP24.96■■□□□ 1.59
CHRFAM7A-203ENST00000401522 CEP170Q5SW79 1584 aa24.93■■□□□ 1.58
CHRFAM7A-203ENST00000401522 TNIKQ9UKE5 1360 aa24.89■■□□□ 1.58
CHRFAM7A-203ENST00000401522 OSCARQ8IYS5 282 aa24.89■■□□□ 1.58
CHRFAM7A-203ENST00000401522 KIAA0586Q9BVV6 1533 aa24.89■■□□□ 1.57
CHRFAM7A-203ENST00000401522 CTTNBP2Q8WZ74 1663 aa24.87■■□□□ 1.57
CHRFAM7A-203ENST00000401522 ZEB1P37275 1124 aaPredicted RBP24.84■■□□□ 1.57
CHRFAM7A-203ENST00000401522 IQGAP2Q13576 1575 aa24.81■■□□□ 1.56
CHRFAM7A-203ENST00000401522 CLASP1Q7Z460 1538 aa24.8■■□□□ 1.56
CHRFAM7A-203ENST00000401522 JPH4Q96JJ6 628 aa24.74■■□□□ 1.55
CHRFAM7A-203ENST00000401522 UGGT2Q9NYU1 1516 aa24.71■■□□□ 1.55
CHRFAM7A-203ENST00000401522 SHROOM2Q13796 1616 aa24.7■■□□□ 1.54
CHRFAM7A-203ENST00000401522 RANGAP1P46060 587 aaPredicted RBP24.67■■□□□ 1.54
CHRFAM7A-203ENST00000401522 CEP162Q5TB80 1403 aa24.67■■□□□ 1.54
CHRFAM7A-203ENST00000401522 CLIP1P30622 1438 aa24.64■■□□□ 1.54
CHRFAM7A-203ENST00000401522 PRG4Q92954 1404 aaPredicted RBP24.62■■□□□ 1.53
CHRFAM7A-203ENST00000401522 EFCAB5A4FU69 1503 aa24.61■■□□□ 1.53
CHRFAM7A-203ENST00000401522 SAMD9Q5K651 1589 aa24.61■■□□□ 1.53
CHRFAM7A-203ENST00000401522 DISP1Q96F81 1524 aa24.61■■□□□ 1.53
CHRFAM7A-203ENST00000401522 ARHGAP35Q9NRY4 1499 aa24.6■■□□□ 1.53
CHRFAM7A-203ENST00000401522 CARMIL2Q6F5E8 1435 aa24.59■■□□□ 1.53
CHRFAM7A-203ENST00000401522 KIAA0556O60303 1618 aa24.56■■□□□ 1.52
CHRFAM7A-203ENST00000401522 P3H3Q8IVL6 736 aa24.53■■□□□ 1.52
CHRFAM7A-203ENST00000401522 ERCC6L2Q5T890 1561 aa24.52■■□□□ 1.52
CHRFAM7A-203ENST00000401522 ARAP1Q96P48 1450 aa24.49■■□□□ 1.51
CHRFAM7A-203ENST00000401522 FHOD3Q2V2M9 1422 aa24.48■■□□□ 1.51
CHRFAM7A-203ENST00000401522 ARHGEF11O15085 1522 aa24.44■■□□□ 1.5
CHRFAM7A-203ENST00000401522 PTPRGP23470 1445 aa24.4■■□□□ 1.5
CHRFAM7A-203ENST00000401522 FMN1Q68DA7 1419 aa24.4■■□□□ 1.5
CHRFAM7A-203ENST00000401522 RIMBP3CA6NJZ7 1639 aa24.37■■□□□ 1.49
CHRFAM7A-203ENST00000401522 RIMBP3BA6NNM3 1639 aa24.37■■□□□ 1.49
CHRFAM7A-203ENST00000401522 RIMBP3Q9UFD9 1639 aa24.37■■□□□ 1.49
CHRFAM7A-203ENST00000401522 TTBK1Q5TCY1 1321 aaPredicted RBP24.35■■□□□ 1.49
CHRFAM7A-203ENST00000401522 VPS8Q8N3P4 1428 aa24.34■■□□□ 1.49
CHRFAM7A-203ENST00000401522 DNAJC5Q9H3Z4 198 aa24.34■■□□□ 1.49
CHRFAM7A-203ENST00000401522 PLB1Q6P1J6 1458 aa24.28■■□□□ 1.48
CHRFAM7A-203ENST00000401522 CASKIN1Q8WXD9 1431 aa24.27■■□□□ 1.48
CHRFAM7A-203ENST00000401522 ABCA8O94911 1581 aa24.27■■□□□ 1.48
CHRFAM7A-203ENST00000401522 UACAQ9BZF9 1416 aa24.26■■□□□ 1.47
CHRFAM7A-203ENST00000401522 RAPGEF6Q8TEU7 1601 aa24.24■■□□□ 1.47
CHRFAM7A-203ENST00000401522 PCF11O94913 1555 aaKnown RBP24.23■■□□□ 1.47
CHRFAM7A-203ENST00000401522 FYCO1Q9BQS8 1478 aa24.23■■□□□ 1.47
CHRFAM7A-203ENST00000401522 UHRF1BP1LA0JNW5 1464 aa24.21■■□□□ 1.47
CHRFAM7A-203ENST00000401522 CYB5RLQ6IPT4 315 aa24.21■■□□□ 1.47
CHRFAM7A-203ENST00000401522 ABCC2Q92887 1545 aa24.19■■□□□ 1.46
CHRFAM7A-203ENST00000401522 NUP153P49790 1475 aaKnown RBP24.18■■□□□ 1.46
CHRFAM7A-203ENST00000401522 HECW1Q76N89 1606 aa24.18■■□□□ 1.46
CHRFAM7A-203ENST00000401522 ATP1B4Q9UN42 357 aaPredicted RBP24.18■■□□□ 1.46
CHRFAM7A-203ENST00000401522 CCER1Q8TC90 406 aaPredicted RBP24.16■■□□□ 1.46
CHRFAM7A-203ENST00000401522 ADCY10Q96PN6 1610 aa24.14■■□□□ 1.46
CHRFAM7A-203ENST00000401522 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.13■■□□□ 1.45
CHRFAM7A-203ENST00000401522 EPRSP07814 1512 aaKnown RBP24.12■■□□□ 1.45
CHRFAM7A-203ENST00000401522 LRRIQ1Q96JM4 1722 aa24.1■■□□□ 1.45
CHRFAM7A-203ENST00000401522 CCDC18Q5T9S5 1454 aa24.09■■□□□ 1.45
CHRFAM7A-203ENST00000401522 KDM5BQ9UGL1 1544 aa24.09■■□□□ 1.45
CHRFAM7A-203ENST00000401522 ATP10BO94823 1461 aa24.09■■□□□ 1.45
CHRFAM7A-203ENST00000401522 MAP3K1Q13233 1512 aa24.07■■□□□ 1.44
CHRFAM7A-203ENST00000401522 APLP2Q06481 763 aa24.07■■□□□ 1.44
CHRFAM7A-203ENST00000401522 ARID3CA6NKF2 412 aa24.06■■□□□ 1.44
CHRFAM7A-203ENST00000401522 CDK13Q14004 1512 aaKnown RBP24.04■■□□□ 1.44
CHRFAM7A-203ENST00000401522 TIAM1Q13009 1591 aa24.03■■□□□ 1.44
CHRFAM7A-203ENST00000401522 NPM1P06748 294 aaKnown RBP eCLIP24.02■■□□□ 1.44
CHRFAM7A-203ENST00000401522 HNRNPUL2Q1KMD3 747 aaKnown RBP24.02■■□□□ 1.44
CHRFAM7A-203ENST00000401522 ZCCHC11Q5TAX3 1644 aaKnown RBP24.01■■□□□ 1.43
CHRFAM7A-203ENST00000401522 CFAP43Q8NDM7 1665 aa24■■□□□ 1.43
CHRFAM7A-203ENST00000401522 CDK11AQ9UQ88 783 aaPredicted RBP23.99■■□□□ 1.43
CHRFAM7A-203ENST00000401522 PLEKHD1A6NEE1 506 aa23.95■■□□□ 1.42
CHRFAM7A-203ENST00000401522 KANK4Q5T7N3 995 aaPredicted RBP23.94■■□□□ 1.42
CHRFAM7A-203ENST00000401522 LRRC9Q6ZRR7 1453 aa23.94■■□□□ 1.42
CHRFAM7A-203ENST00000401522 MAGI3Q5TCQ9 1506 aa23.92■■□□□ 1.42
CHRFAM7A-203ENST00000401522 MTUS2Q5JR59 1369 aa23.9■■□□□ 1.42
CHRFAM7A-203ENST00000401522 MAPKBP1O60336 1514 aa23.89■■□□□ 1.41
CHRFAM7A-203ENST00000401522 TROQ12816 1431 aaPredicted RBP23.89■■□□□ 1.41
CHRFAM7A-203ENST00000401522 ASXL2Q76L83 1435 aa23.89■■□□□ 1.41
CHRFAM7A-203ENST00000401522 EHBP1L1Q8N3D4 1523 aa23.87■■□□□ 1.41
CHRFAM7A-203ENST00000401522 WDR7Q9Y4E6 1490 aa23.86■■□□□ 1.41
CHRFAM7A-203ENST00000401522 KCNH8Q96L42 1107 aa23.79■■□□□ 1.4
CHRFAM7A-203ENST00000401522 SUPT6HQ7KZ85 1726 aaKnown RBP23.77■■□□□ 1.4
CHRFAM7A-203ENST00000401522 KIF14Q15058 1648 aa23.77■■□□□ 1.39
CHRFAM7A-203ENST00000401522 NCOA2Q15596 1464 aa23.75■■□□□ 1.39
CHRFAM7A-203ENST00000401522 ABCC10Q5T3U5 1492 aa23.72■■□□□ 1.39
CHRFAM7A-203ENST00000401522 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.71■■□□□ 1.39
CHRFAM7A-203ENST00000401522 ABCA9Q8IUA7 1624 aa23.68■■□□□ 1.38
CHRFAM7A-203ENST00000401522 GLI2P10070 1586 aa23.67■■□□□ 1.38
CHRFAM7A-203ENST00000401522 PHLDB1Q86UU1 1377 aa23.67■■□□□ 1.38
CHRFAM7A-203ENST00000401522 DIEXFQ68CQ4 756 aaKnown RBP23.67■■□□□ 1.38
CHRFAM7A-203ENST00000401522 TTC37Q6PGP7 1564 aa23.66■■□□□ 1.38
CHRFAM7A-203ENST00000401522 DIP2BQ9P265 1576 aa23.66■■□□□ 1.38
CHRFAM7A-203ENST00000401522 CCNB3Q8WWL7 1395 aa23.66■■□□□ 1.38
CHRFAM7A-203ENST00000401522 GPATCH8Q9UKJ3 1502 aaKnown RBP23.64■■□□□ 1.37
CHRFAM7A-203ENST00000401522 FAM69CQ0P6D2 419 aa23.64■■□□□ 1.37
CHRFAM7A-203ENST00000401522 MYOM3Q5VTT5 1437 aa23.62■■□□□ 1.37
CHRFAM7A-203ENST00000401522 CDC42BPAQ5VT25 1732 aa23.6■■□□□ 1.37
CHRFAM7A-203ENST00000401522 PLCH2O75038 1416 aa23.6■■□□□ 1.37
CHRFAM7A-203ENST00000401522 SCAF1Q9H7N4 1312 aaKnown RBP23.59■■□□□ 1.37
CHRFAM7A-203ENST00000401522 CD109Q6YHK3 1445 aa23.59■■□□□ 1.37
CHRFAM7A-203ENST00000401522 MYO5CQ9NQX4 1742 aa23.58■■□□□ 1.37
CHRFAM7A-203ENST00000401522 KIF13AQ9H1H9 1805 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms