RNA–Protein interactions for RNA: ENST00000400777.7

CASP9-204, Transcript of caspase 9, humanhuman

TSL 1 (best)

Gene CASP9, Length 1,878 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9-204ENST00000400777 CLIP1P30622 1438 aa25.74■■□□□ 1.71
CASP9-204ENST00000400777 CTTNBP2Q8WZ74 1663 aa25.74■■□□□ 1.71
CASP9-204ENST00000400777 NUP160Q12769 1436 aa25.7■■□□□ 1.7
CASP9-204ENST00000400777 CHD1O14646 1710 aa25.69■■□□□ 1.7
CASP9-204ENST00000400777 CEP170Q5SW79 1584 aa25.69■■□□□ 1.7
CASP9-204ENST00000400777 KIAA0586Q9BVV6 1533 aa25.68■■□□□ 1.7
CASP9-204ENST00000400777 IQGAP2Q13576 1575 aa25.66■■□□□ 1.7
CASP9-204ENST00000400777 ARHGAP35Q9NRY4 1499 aa25.59■■□□□ 1.69
CASP9-204ENST00000400777 EFCAB5A4FU69 1503 aa25.54■■□□□ 1.68
CASP9-204ENST00000400777 P3H3Q8IVL6 736 aa25.53■■□□□ 1.68
CASP9-204ENST00000400777 ARAP1Q96P48 1450 aa25.52■■□□□ 1.68
CASP9-204ENST00000400777 UGGT2Q9NYU1 1516 aa25.52■■□□□ 1.68
CASP9-204ENST00000400777 JPH4Q96JJ6 628 aa25.52■■□□□ 1.68
CASP9-204ENST00000400777 SAMD9Q5K651 1589 aa25.49■■□□□ 1.67
CASP9-204ENST00000400777 OSCARQ8IYS5 282 aa25.47■■□□□ 1.67
CASP9-204ENST00000400777 FHOD3Q2V2M9 1422 aa25.46■■□□□ 1.67
CASP9-204ENST00000400777 VPS8Q8N3P4 1428 aa25.45■■□□□ 1.66
CASP9-204ENST00000400777 CLASP1Q7Z460 1538 aa25.44■■□□□ 1.66
CASP9-204ENST00000400777 DISP1Q96F81 1524 aa25.43■■□□□ 1.66
CASP9-204ENST00000400777 CARMIL2Q6F5E8 1435 aa25.4■■□□□ 1.66
CASP9-204ENST00000400777 KIAA0556O60303 1618 aa25.39■■□□□ 1.65
CASP9-204ENST00000400777 PRG4Q92954 1404 aaPredicted RBP25.38■■□□□ 1.65
CASP9-204ENST00000400777 SHROOM2Q13796 1616 aa25.36■■□□□ 1.65
CASP9-204ENST00000400777 FMN1Q68DA7 1419 aa25.35■■□□□ 1.65
CASP9-204ENST00000400777 TTBK1Q5TCY1 1321 aaPredicted RBP25.29■■□□□ 1.64
CASP9-204ENST00000400777 APLP2Q06481 763 aa25.23■■□□□ 1.63
CASP9-204ENST00000400777 CASKIN1Q8WXD9 1431 aa25.23■■□□□ 1.63
CASP9-204ENST00000400777 ERCC6L2Q5T890 1561 aa25.22■■□□□ 1.63
CASP9-204ENST00000400777 ATP1B4Q9UN42 357 aaPredicted RBP25.22■■□□□ 1.63
CASP9-204ENST00000400777 PCF11O94913 1555 aaKnown RBP25.22■■□□□ 1.63
CASP9-204ENST00000400777 FYCO1Q9BQS8 1478 aa25.2■■□□□ 1.63
CASP9-204ENST00000400777 PTPRGP23470 1445 aa25.19■■□□□ 1.62
CASP9-204ENST00000400777 PPARGC1BQ86YN6 1023 aaKnown RBP25.13■■□□□ 1.61
CASP9-204ENST00000400777 PLB1Q6P1J6 1458 aa25.12■■□□□ 1.61
CASP9-204ENST00000400777 HECW1Q76N89 1606 aa25.09■■□□□ 1.61
CASP9-204ENST00000400777 RAPGEF6Q8TEU7 1601 aa25.08■■□□□ 1.61
CASP9-204ENST00000400777 MAP3K1Q13233 1512 aa25.05■■□□□ 1.6
CASP9-204ENST00000400777 ABCA8O94911 1581 aa25.04■■□□□ 1.6
CASP9-204ENST00000400777 TIAM1Q13009 1591 aa25.04■■□□□ 1.6
CASP9-204ENST00000400777 NUP153P49790 1475 aaKnown RBP25.04■■□□□ 1.6
CASP9-204ENST00000400777 UACAQ9BZF9 1416 aa25.02■■□□□ 1.6
CASP9-204ENST00000400777 ARID3CA6NKF2 412 aa25.02■■□□□ 1.6
CASP9-204ENST00000400777 CCDC18Q5T9S5 1454 aa25.02■■□□□ 1.6
CASP9-204ENST00000400777 EPRSP07814 1512 aaKnown RBP25.02■■□□□ 1.6
CASP9-204ENST00000400777 KANK4Q5T7N3 995 aaPredicted RBP25.02■■□□□ 1.6
CASP9-204ENST00000400777 ARHGEF11O15085 1522 aa25■■□□□ 1.59
CASP9-204ENST00000400777 CFAP43Q8NDM7 1665 aa24.98■■□□□ 1.59
CASP9-204ENST00000400777 LRRIQ1Q96JM4 1722 aa24.97■■□□□ 1.59
CASP9-204ENST00000400777 CDK13Q14004 1512 aaKnown RBP24.96■■□□□ 1.59
CASP9-204ENST00000400777 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.96■■□□□ 1.59
CASP9-204ENST00000400777 HNRNPUL2Q1KMD3 747 aaKnown RBP24.96■■□□□ 1.59
CASP9-204ENST00000400777 LRRC9Q6ZRR7 1453 aa24.95■■□□□ 1.58
CASP9-204ENST00000400777 ABCC2Q92887 1545 aa24.94■■□□□ 1.58
CASP9-204ENST00000400777 MTUS2Q5JR59 1369 aa24.91■■□□□ 1.58
CASP9-204ENST00000400777 UHRF1BP1LA0JNW5 1464 aa24.9■■□□□ 1.58
CASP9-204ENST00000400777 ATP10BO94823 1461 aa24.89■■□□□ 1.58
CASP9-204ENST00000400777 CDK11AQ9UQ88 783 aaPredicted RBP24.89■■□□□ 1.57
CASP9-204ENST00000400777 RIMBP3CA6NJZ7 1639 aa24.88■■□□□ 1.57
CASP9-204ENST00000400777 RIMBP3BA6NNM3 1639 aa24.88■■□□□ 1.57
CASP9-204ENST00000400777 RIMBP3Q9UFD9 1639 aa24.88■■□□□ 1.57
CASP9-204ENST00000400777 MAGI3Q5TCQ9 1506 aa24.83■■□□□ 1.57
CASP9-204ENST00000400777 EHBP1L1Q8N3D4 1523 aa24.83■■□□□ 1.57
CASP9-204ENST00000400777 ADCY10Q96PN6 1610 aa24.83■■□□□ 1.56
CASP9-204ENST00000400777 CYB5RLQ6IPT4 315 aa24.81■■□□□ 1.56
CASP9-204ENST00000400777 PLEKHD1A6NEE1 506 aa24.81■■□□□ 1.56
CASP9-204ENST00000400777 KDM5BQ9UGL1 1544 aa24.8■■□□□ 1.56
CASP9-204ENST00000400777 TRIM26Q12899 539 aaPredicted RBP24.8■■□□□ 1.56
CASP9-204ENST00000400777 TROQ12816 1431 aaPredicted RBP24.76■■□□□ 1.55
CASP9-204ENST00000400777 ZCCHC11Q5TAX3 1644 aaKnown RBP24.75■■□□□ 1.55
CASP9-204ENST00000400777 NPM1P06748 294 aaKnown RBP eCLIP24.72■■□□□ 1.55
CASP9-204ENST00000400777 NCOA2Q15596 1464 aa24.72■■□□□ 1.55
CASP9-204ENST00000400777 SUPT6HQ7KZ85 1726 aaKnown RBP24.72■■□□□ 1.55
CASP9-204ENST00000400777 PHLDB1Q86UU1 1377 aa24.71■■□□□ 1.55
CASP9-204ENST00000400777 PCGF6Q9BYE7 350 aa24.68■■□□□ 1.54
CASP9-204ENST00000400777 KIF14Q15058 1648 aa24.62■■□□□ 1.53
CASP9-204ENST00000400777 KCNH8Q96L42 1107 aa24.61■■□□□ 1.53
CASP9-204ENST00000400777 MYOM3Q5VTT5 1437 aa24.6■■□□□ 1.53
CASP9-204ENST00000400777 RRBP1Q9P2E9 1410 aaKnown RBP24.6■■□□□ 1.53
CASP9-204ENST00000400777 WDR7Q9Y4E6 1490 aa24.6■■□□□ 1.53
CASP9-204ENST00000400777 ASXL2Q76L83 1435 aa24.6■■□□□ 1.53
CASP9-204ENST00000400777 CCNB3Q8WWL7 1395 aa24.59■■□□□ 1.53
CASP9-204ENST00000400777 FGD6Q6ZV73 1430 aa24.56■■□□□ 1.52
CASP9-204ENST00000400777 DNAJC5Q9H3Z4 198 aa24.55■■□□□ 1.52
CASP9-204ENST00000400777 ABCC10Q5T3U5 1492 aa24.55■■□□□ 1.52
CASP9-204ENST00000400777 GPATCH8Q9UKJ3 1502 aaKnown RBP24.51■■□□□ 1.51
CASP9-204ENST00000400777 FAM50AQ14320 339 aaKnown RBP24.51■■□□□ 1.51
CASP9-204ENST00000400777 MIA2Q96PC5 1412 aa24.51■■□□□ 1.51
CASP9-204ENST00000400777 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.5■■□□□ 1.51
CASP9-204ENST00000400777 MAPKBP1O60336 1514 aa24.49■■□□□ 1.51
CASP9-204ENST00000400777 CFDP1Q9UEE9 299 aaPredicted RBP24.49■■□□□ 1.51
CASP9-204ENST00000400777 TTC37Q6PGP7 1564 aa24.47■■□□□ 1.51
CASP9-204ENST00000400777 ITSN2Q9NZM3 1697 aa24.46■■□□□ 1.51
CASP9-204ENST00000400777 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.45■■□□□ 1.5
CASP9-204ENST00000400777 PTPN23Q9H3S7 1636 aa24.43■■□□□ 1.5
CASP9-204ENST00000400777 CDC42BPAQ5VT25 1732 aa24.42■■□□□ 1.5
CASP9-204ENST00000400777 TCOF1Q13428 1488 aaKnown RBP24.41■■□□□ 1.5
CASP9-204ENST00000400777 ZNF777Q9ULD5 760 aaPredicted RBP24.41■■□□□ 1.5
CASP9-204ENST00000400777 ITGAEP38570 1179 aa24.4■■□□□ 1.5
CASP9-204ENST00000400777 ZNF644Q9H582 1327 aaPredicted RBP24.39■■□□□ 1.49
CASP9-204ENST00000400777 PREX2Q70Z35 1606 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms