RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 RIMBP3CA6NJZ7 1639 aa29.28■■■□□ 2.28
CTNS-203ENST00000399306 RIMBP3BA6NNM3 1639 aa29.28■■■□□ 2.28
CTNS-203ENST00000399306 RIMBP3Q9UFD9 1639 aa29.28■■■□□ 2.28
CTNS-203ENST00000399306 KIF21BO75037 1637 aa29.27■■■□□ 2.28
CTNS-203ENST00000399306 JPH4Q96JJ6 628 aa29.24■■■□□ 2.27
CTNS-203ENST00000399306 FAM9AQ8IZU1 332 aaPredicted RBP29.23■■■□□ 2.27
CTNS-203ENST00000399306 IQGAP2Q13576 1575 aa29.22■■■□□ 2.27
CTNS-203ENST00000399306 CTTNBP2Q8WZ74 1663 aa29.19■■■□□ 2.26
CTNS-203ENST00000399306 PRG4Q92954 1404 aaPredicted RBP29.13■■■□□ 2.25
CTNS-203ENST00000399306 UGGT2Q9NYU1 1516 aa29.11■■■□□ 2.25
CTNS-203ENST00000399306 ARAP1Q96P48 1450 aa29.1■■■□□ 2.25
CTNS-203ENST00000399306 GOLGA3Q08378 1498 aa29.09■■■□□ 2.25
CTNS-203ENST00000399306 ERCC6L2Q5T890 1561 aa29.06■■■□□ 2.24
CTNS-203ENST00000399306 CARMIL2Q6F5E8 1435 aa29.05■■■□□ 2.24
CTNS-203ENST00000399306 DISP1Q96F81 1524 aa28.98■■■□□ 2.23
CTNS-203ENST00000399306 CYB5RLQ6IPT4 315 aa28.96■■■□□ 2.23
CTNS-203ENST00000399306 KIAA0556O60303 1618 aa28.93■■■□□ 2.22
CTNS-203ENST00000399306 TNIKQ9UKE5 1360 aa28.92■■■□□ 2.22
CTNS-203ENST00000399306 UBTFP17480 764 aaKnown RBP28.89■■■□□ 2.22
CTNS-203ENST00000399306 SAMD9Q5K651 1589 aa28.86■■■□□ 2.21
CTNS-203ENST00000399306 PTPRGP23470 1445 aa28.85■■■□□ 2.21
CTNS-203ENST00000399306 EFCAB5A4FU69 1503 aa28.82■■■□□ 2.2
CTNS-203ENST00000399306 EHMT2Q96KQ7 1210 aa28.71■■■□□ 2.19
CTNS-203ENST00000399306 UHRF1BP1LA0JNW5 1464 aa28.71■■■□□ 2.19
CTNS-203ENST00000399306 UACAQ9BZF9 1416 aa28.69■■■□□ 2.18
CTNS-203ENST00000399306 ADCY10Q96PN6 1610 aa28.67■■■□□ 2.18
CTNS-203ENST00000399306 ABCC2Q92887 1545 aa28.64■■■□□ 2.17
CTNS-203ENST00000399306 ARHGAP35Q9NRY4 1499 aa28.62■■■□□ 2.17
CTNS-203ENST00000399306 ABCA8O94911 1581 aa28.62■■■□□ 2.17
CTNS-203ENST00000399306 P3H3Q8IVL6 736 aa28.59■■■□□ 2.17
CTNS-203ENST00000399306 FHOD3Q2V2M9 1422 aa28.59■■■□□ 2.17
CTNS-203ENST00000399306 NPM1P06748 294 aaKnown RBP eCLIP28.57■■■□□ 2.16
CTNS-203ENST00000399306 RANGAP1P46060 587 aaPredicted RBP28.57■■■□□ 2.16
CTNS-203ENST00000399306 TTBK1Q5TCY1 1321 aaPredicted RBP28.56■■■□□ 2.16
CTNS-203ENST00000399306 PLB1Q6P1J6 1458 aa28.55■■■□□ 2.16
CTNS-203ENST00000399306 KDM5BQ9UGL1 1544 aa28.53■■■□□ 2.16
CTNS-203ENST00000399306 CLIP1P30622 1438 aa28.53■■■□□ 2.16
CTNS-203ENST00000399306 FMN1Q68DA7 1419 aa28.52■■■□□ 2.16
CTNS-203ENST00000399306 MAPKBP1O60336 1514 aa28.52■■■□□ 2.16
CTNS-203ENST00000399306 LOC105371045A0A1W2PR82 267 aa28.5■■■□□ 2.15
CTNS-203ENST00000399306 RAPGEF6Q8TEU7 1601 aa28.5■■■□□ 2.15
CTNS-203ENST00000399306 CEP162Q5TB80 1403 aa28.46■■■□□ 2.15
CTNS-203ENST00000399306 ZCCHC11Q5TAX3 1644 aaKnown RBP28.42■■■□□ 2.14
CTNS-203ENST00000399306 NUP153P49790 1475 aaKnown RBP28.37■■■□□ 2.13
CTNS-203ENST00000399306 ATP10BO94823 1461 aa28.35■■■□□ 2.13
CTNS-203ENST00000399306 ASXL2Q76L83 1435 aa28.34■■■□□ 2.13
CTNS-203ENST00000399306 HECW1Q76N89 1606 aa28.33■■■□□ 2.13
CTNS-203ENST00000399306 ABCC10Q5T3U5 1492 aa28.32■■■□□ 2.12
CTNS-203ENST00000399306 CASKIN1Q8WXD9 1431 aa28.31■■■□□ 2.12
CTNS-203ENST00000399306 FYCO1Q9BQS8 1478 aa28.27■■■□□ 2.12
CTNS-203ENST00000399306 WDR7Q9Y4E6 1490 aa28.27■■■□□ 2.12
CTNS-203ENST00000399306 DIP2BQ9P265 1576 aa28.26■■■□□ 2.11
CTNS-203ENST00000399306 TRHP20396 242 aaPredicted RBP28.25■■■□□ 2.11
CTNS-203ENST00000399306 KIF13AQ9H1H9 1805 aa28.25■■■□□ 2.11
CTNS-203ENST00000399306 EPRSP07814 1512 aaKnown RBP28.23■■■□□ 2.11
CTNS-203ENST00000399306 PCF11O94913 1555 aaKnown RBP28.23■■■□□ 2.11
CTNS-203ENST00000399306 GLI2P10070 1586 aa28.23■■■□□ 2.11
CTNS-203ENST00000399306 CCDC18Q5T9S5 1454 aa28.2■■■□□ 2.1
CTNS-203ENST00000399306 FAM69CQ0P6D2 419 aa28.16■■■□□ 2.1
CTNS-203ENST00000399306 VPS8Q8N3P4 1428 aa28.15■■■□□ 2.1
CTNS-203ENST00000399306 CDK13Q14004 1512 aaKnown RBP28.14■■■□□ 2.1
CTNS-203ENST00000399306 PLEKHD1A6NEE1 506 aa28.14■■■□□ 2.1
CTNS-203ENST00000399306 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.14■■■□□ 2.1
CTNS-203ENST00000399306 HNRNPUL2Q1KMD3 747 aaKnown RBP28.14■■■□□ 2.1
CTNS-203ENST00000399306 CDK11AQ9UQ88 783 aaPredicted RBP28.14■■■□□ 2.1
CTNS-203ENST00000399306 ARID3CA6NKF2 412 aa28.13■■■□□ 2.09
CTNS-203ENST00000399306 LRRIQ1Q96JM4 1722 aa28.12■■■□□ 2.09
CTNS-203ENST00000399306 ATP1B4Q9UN42 357 aaPredicted RBP28.12■■■□□ 2.09
CTNS-203ENST00000399306 MAP3K4Q9Y6R4 1608 aa28.06■■■□□ 2.08
CTNS-203ENST00000399306 CFAP43Q8NDM7 1665 aa28.06■■■□□ 2.08
CTNS-203ENST00000399306 ABCA9Q8IUA7 1624 aa28.03■■■□□ 2.08
CTNS-203ENST00000399306 TROQ12816 1431 aaPredicted RBP28.02■■■□□ 2.08
CTNS-203ENST00000399306 KCNH8Q96L42 1107 aa28.02■■■□□ 2.08
CTNS-203ENST00000399306 MAP3K1Q13233 1512 aa27.97■■■□□ 2.07
CTNS-203ENST00000399306 MAGI3Q5TCQ9 1506 aa27.97■■■□□ 2.07
CTNS-203ENST00000399306 CD109Q6YHK3 1445 aa27.96■■■□□ 2.07
CTNS-203ENST00000399306 TEX14Q8IWB6 1497 aa27.95■■■□□ 2.06
CTNS-203ENST00000399306 PPRC1Q5VV67 1664 aaKnown RBP27.94■■■□□ 2.06
CTNS-203ENST00000399306 KIF14Q15058 1648 aa27.92■■■□□ 2.06
CTNS-203ENST00000399306 TSPOAP1O95153 1857 aa27.92■■■□□ 2.06
CTNS-203ENST00000399306 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.92■■■□□ 2.06
CTNS-203ENST00000399306 TIAM1Q13009 1591 aa27.9■■■□□ 2.06
CTNS-203ENST00000399306 EHBP1L1Q8N3D4 1523 aa27.87■■■□□ 2.05
CTNS-203ENST00000399306 MTUS2Q5JR59 1369 aa27.86■■■□□ 2.05
CTNS-203ENST00000399306 PHLDB1Q86UU1 1377 aa27.86■■■□□ 2.05
CTNS-203ENST00000399306 ARAP3Q8WWN8 1544 aa27.85■■■□□ 2.05
CTNS-203ENST00000399306 TTC37Q6PGP7 1564 aa27.85■■■□□ 2.05
CTNS-203ENST00000399306 PLCH2O75038 1416 aa27.8■■■□□ 2.04
CTNS-203ENST00000399306 NEO1Q92859 1461 aa27.8■■■□□ 2.04
CTNS-203ENST00000399306 MYO5CQ9NQX4 1742 aa27.79■■■□□ 2.04
CTNS-203ENST00000399306 APLP2Q06481 763 aa27.78■■■□□ 2.04
CTNS-203ENST00000399306 CFAP74Q9C0B2 1584 aa27.77■■■□□ 2.04
CTNS-203ENST00000399306 LRRC9Q6ZRR7 1453 aa27.77■■■□□ 2.04
CTNS-203ENST00000399306 SUPT6HQ7KZ85 1726 aaKnown RBP27.72■■■□□ 2.03
CTNS-203ENST00000399306 FANCAO15360 1455 aa27.71■■■□□ 2.03
CTNS-203ENST00000399306 KDM6BO15054 1643 aa27.71■■■□□ 2.03
CTNS-203ENST00000399306 PREX2Q70Z35 1606 aa27.7■■■□□ 2.03
CTNS-203ENST00000399306 CDC42BPAQ5VT25 1732 aa27.68■■■□□ 2.02
CTNS-203ENST00000399306 EFCAB2Q5VUJ9 269 aa27.68■■■□□ 2.02
CTNS-203ENST00000399306 CDC42BPBQ9Y5S2 1711 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms