RNA–Protein interactions for RNA: ENST00000399218.8

GAREM1-202, Transcript of GRB2 associated regulator of MAPK1 subtype 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene GAREM1, Length 7,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAREM1-202ENST00000399218 FANCD2Q9BXW9 1451 aa15.32■□□□□ 0.04
GAREM1-202ENST00000399218 CFDP1Q9UEE9 299 aaPredicted RBP15.31■□□□□ 0.04
GAREM1-202ENST00000399218 NEFLP07196 543 aa15.26■□□□□ 0.03
GAREM1-202ENST00000399218 CEP162Q5TB80 1403 aa15.25■□□□□ 0.03
GAREM1-202ENST00000399218 NESP48681 1621 aa15.24■□□□□ 0.03
GAREM1-202ENST00000399218 PPP1R15AO75807 674 aaPredicted RBP15.24■□□□□ 0.03
GAREM1-202ENST00000399218 C14orf37Q86TY3 774 aa15.23■□□□□ 0.03
GAREM1-202ENST00000399218 OSCARQ8IYS5 282 aa15.22■□□□□ 0.03
GAREM1-202ENST00000399218 RGL3Q3MIN7 710 aa15.22■□□□□ 0.03
GAREM1-202ENST00000399218 EEA1Q15075 1411 aa15.19■□□□□ 0.02
GAREM1-202ENST00000399218 ZBTB7CA1YPR0 619 aa15.18■□□□□ 0.02
GAREM1-202ENST00000399218 JPH4Q96JJ6 628 aa15.16■□□□□ 0.02
GAREM1-202ENST00000399218 BCL11AQ9H165 835 aa15.16■□□□□ 0.02
GAREM1-202ENST00000399218 RAD54L2Q9Y4B4 1467 aa15.15■□□□□ 0.02
GAREM1-202ENST00000399218 CARMIL2Q6F5E8 1435 aa15.14■□□□□ 0.01
GAREM1-202ENST00000399218 A0A0G2JS52 829 aa15.13■□□□□ 0.01
GAREM1-202ENST00000399218 TONSLQ96HA7 1378 aa15.13■□□□□ 0.01
GAREM1-202ENST00000399218 GGT6Q6P531 493 aa15.12■□□□□ 0.01
GAREM1-202ENST00000399218 AQRO60306 1485 aaKnown RBP eCLIP15.11■□□□□ 0.01
GAREM1-202ENST00000399218 DIEXFQ68CQ4 756 aaKnown RBP15.11■□□□□ 0.01
GAREM1-202ENST00000399218 HIRIP3Q9BW71 556 aaPredicted RBP15.1■□□□□ 0.01
GAREM1-202ENST00000399218 CCNB3Q8WWL7 1395 aa15.09■□□□□ 0.01
GAREM1-202ENST00000399218 TNIKQ9UKE5 1360 aa15.07■□□□□ 0
GAREM1-202ENST00000399218 NCAPD3P42695 1498 aa15.07■□□□□ 0
GAREM1-202ENST00000399218 FGD5Q6ZNL6 1462 aa15.05■□□□□ -0
GAREM1-202ENST00000399218 ANP32CO43423 234 aa15.04■□□□□ -0
GAREM1-202ENST00000399218 RUSC2Q8N2Y8 1516 aa15.04■□□□□ -0
GAREM1-202ENST00000399218 BICRAQ9NZM4 1560 aa15.01□□□□□ -0.01
GAREM1-202ENST00000399218 FHOD3Q2V2M9 1422 aa15.01□□□□□ -0.01
GAREM1-202ENST00000399218 NEFMP07197 916 aa15□□□□□ -0.01
GAREM1-202ENST00000399218 LMOD2Q6P5Q4 547 aa15□□□□□ -0.01
GAREM1-202ENST00000399218 GAPVD1Q14C86 1478 aa14.99□□□□□ -0.01
GAREM1-202ENST00000399218 UNC13AQ9UPW8 1703 aa14.99□□□□□ -0.01
GAREM1-202ENST00000399218 HNRNPMP52272 730 aaKnown RBP eCLIP14.99□□□□□ -0.01
GAREM1-202ENST00000399218 HAP1P54257 671 aaPredicted RBP14.99□□□□□ -0.01
GAREM1-202ENST00000399218 KANK4Q5T7N3 995 aaPredicted RBP14.98□□□□□ -0.01
GAREM1-202ENST00000399218 RAPGEF2Q9Y4G8 1499 aa14.97□□□□□ -0.01
GAREM1-202ENST00000399218 FHAD1B1AJZ9 1412 aa14.97□□□□□ -0.01
GAREM1-202ENST00000399218 TMC1Q8TDI8 760 aa14.97□□□□□ -0.01
GAREM1-202ENST00000399218 FAM69CQ0P6D2 419 aa14.96□□□□□ -0.01
GAREM1-202ENST00000399218 SALL2Q9Y467 1007 aaPredicted RBP14.96□□□□□ -0.01
GAREM1-202ENST00000399218 ERICH6Q7L0X2 663 aa14.94□□□□□ -0.02
GAREM1-202ENST00000399218 PTPRGP23470 1445 aa14.93□□□□□ -0.02
GAREM1-202ENST00000399218 AEBP2Q6ZN18 517 aaPredicted RBP14.92□□□□□ -0.02
GAREM1-202ENST00000399218 EFCAB2Q5VUJ9 269 aa14.92□□□□□ -0.02
GAREM1-202ENST00000399218 FOXD1Q16676 465 aa14.91□□□□□ -0.02
GAREM1-202ENST00000399218 DDX10Q13206 875 aaKnown RBP14.91□□□□□ -0.02
GAREM1-202ENST00000399218 SAFB2Q14151 953 aaKnown RBP eCLIP14.91□□□□□ -0.02
GAREM1-202ENST00000399218 MRC2Q9UBG0 1479 aa14.91□□□□□ -0.02
GAREM1-202ENST00000399218 ZNF316A6NFI3 1004 aaPredicted RBP14.9□□□□□ -0.02
GAREM1-202ENST00000399218 NUTM2DQ5VT03 806 aaPredicted RBP14.9□□□□□ -0.02
GAREM1-202ENST00000399218 KIF3BO15066 747 aa14.88□□□□□ -0.03
GAREM1-202ENST00000399218 POGKQ9P215 609 aa14.87□□□□□ -0.03
GAREM1-202ENST00000399218 PRDM2Q13029 1718 aa14.87□□□□□ -0.03
GAREM1-202ENST00000399218 CLSPNQ9HAW4 1339 aa14.87□□□□□ -0.03
GAREM1-202ENST00000399218 SIN3AQ96ST3 1273 aa14.86□□□□□ -0.03
GAREM1-202ENST00000399218 CANXP27824 592 aaKnown RBP14.86□□□□□ -0.03
GAREM1-202ENST00000399218 STK26Q9P289 416 aa14.86□□□□□ -0.03
GAREM1-202ENST00000399218 KANK1Q14678 1352 aa14.85□□□□□ -0.03
GAREM1-202ENST00000399218 PPM1GO15355 546 aaPredicted RBP14.85□□□□□ -0.03
GAREM1-202ENST00000399218 SENP3-EIF4A1A0A087X0R7 540 aa14.85□□□□□ -0.03
GAREM1-202ENST00000399218 FMN1Q68DA7 1419 aa14.83□□□□□ -0.03
GAREM1-202ENST00000399218 MYT1Q01538 1121 aa14.82□□□□□ -0.04
GAREM1-202ENST00000399218 SOX12O15370 315 aa14.82□□□□□ -0.04
GAREM1-202ENST00000399218 IGF1RP08069 1367 aa14.82□□□□□ -0.04
GAREM1-202ENST00000399218 FAM9BQ8IZU0 186 aa14.82□□□□□ -0.04
GAREM1-202ENST00000399218 CFTRP13569 1480 aa14.81□□□□□ -0.04
GAREM1-202ENST00000399218 ARHGAP35Q9NRY4 1499 aa14.81□□□□□ -0.04
GAREM1-202ENST00000399218 SPAG9O60271 1321 aaKnown RBP14.8□□□□□ -0.04
GAREM1-202ENST00000399218 DCAF11Q8TEB1 546 aa14.8□□□□□ -0.04
GAREM1-202ENST00000399218 HMGXB3Q12766 1538 aa14.78□□□□□ -0.04
GAREM1-202ENST00000399218 WASHC2CQ9Y4E1 1318 aa14.78□□□□□ -0.04
GAREM1-202ENST00000399218 CARD11Q9BXL7 1154 aa14.77□□□□□ -0.04
GAREM1-202ENST00000399218 TOPBP1Q92547 1522 aa14.77□□□□□ -0.04
GAREM1-202ENST00000399218 TNNT2P45379 298 aaPredicted RBP14.76□□□□□ -0.05
GAREM1-202ENST00000399218 GRIN2BQ13224 1484 aa14.76□□□□□ -0.05
GAREM1-202ENST00000399218 SNAPC4Q5SXM2 1469 aa14.76□□□□□ -0.05
GAREM1-202ENST00000399218 PKD2Q13563 968 aa14.76□□□□□ -0.05
GAREM1-202ENST00000399218 VPS8Q8N3P4 1428 aa14.75□□□□□ -0.05
GAREM1-202ENST00000399218 PRG4Q92954 1404 aaPredicted RBP14.74□□□□□ -0.05
GAREM1-202ENST00000399218 IFT140Q96RY7 1462 aa14.73□□□□□ -0.05
GAREM1-202ENST00000399218 ZBTB47Q9UFB7 747 aaPredicted RBP14.72□□□□□ -0.05
GAREM1-202ENST00000399218 EIF4G2P78344 907 aaKnown RBP eCLIP14.72□□□□□ -0.05
GAREM1-202ENST00000399218 SYNJ1O43426 1573 aa14.71□□□□□ -0.05
GAREM1-202ENST00000399218 POLA1P09884 1462 aaPredicted RBP14.71□□□□□ -0.05
GAREM1-202ENST00000399218 ARXQ96QS3 562 aa14.71□□□□□ -0.05
GAREM1-202ENST00000399218 NUTM2FA1L443 756 aa14.7□□□□□ -0.06
GAREM1-202ENST00000399218 HDGFP51858 240 aaKnown RBP14.7□□□□□ -0.06
GAREM1-202ENST00000399218 DAXXQ9UER7 740 aaPredicted RBP14.7□□□□□ -0.06
GAREM1-202ENST00000399218 NUP155O75694 1391 aa14.7□□□□□ -0.06
GAREM1-202ENST00000399218 CUX1P39880 1505 aa14.69□□□□□ -0.06
GAREM1-202ENST00000399218 SRPK2P78362 688 aaKnown RBP14.68□□□□□ -0.06
GAREM1-202ENST00000399218 CCDC18Q5T9S5 1454 aa14.68□□□□□ -0.06
GAREM1-202ENST00000399218 PAK3O75914 559 aaPredicted RBP14.68□□□□□ -0.06
GAREM1-202ENST00000399218 WDR43Q15061 677 aaKnown RBP eCLIP14.68□□□□□ -0.06
GAREM1-202ENST00000399218 LAMC3Q9Y6N6 1575 aa14.65□□□□□ -0.06
GAREM1-202ENST00000399218 ZNF644Q9H582 1327 aaPredicted RBP14.64□□□□□ -0.07
GAREM1-202ENST00000399218 ANKRD30AQ9BXX3 1397 aa14.64□□□□□ -0.07
GAREM1-202ENST00000399218 EID1Q9Y6B2 187 aa14.63□□□□□ -0.07
GAREM1-202ENST00000399218 HNRNPUQ00839 825 aaKnown RBP eCLIP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms