RNA–Protein interactions for RNA: ENST00000399054.6

MKKS-202, Transcript of McKusick-Kaufman syndrome, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKKS, Length 2,663 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKKS-202ENST00000399054 SSUH2Q9Y2M2 353 aa8.3□□□□□ -1.08
MKKS-202ENST00000399054 MROH2BQ7Z745 1585 aa8.3□□□□□ -1.08
MKKS-202ENST00000399054 WRNQ14191 1432 aaPredicted RBP eCLIP8.29□□□□□ -1.08
MKKS-202ENST00000399054 FBXO3Q9UK99 471 aa8.29□□□□□ -1.08
MKKS-202ENST00000399054 CCDC88BA6NC98 1476 aa8.29□□□□□ -1.08
MKKS-202ENST00000399054 PRKCSHP14314 528 aaPredicted RBP8.29□□□□□ -1.08
MKKS-202ENST00000399054 BCANQ96GW7 911 aa8.29□□□□□ -1.08
MKKS-202ENST00000399054 KCNH8Q96L42 1107 aa8.29□□□□□ -1.08
MKKS-202ENST00000399054 SOGA1O94964 1423 aa8.29□□□□□ -1.08
MKKS-202ENST00000399054 ABCC8Q09428 1581 aa8.28□□□□□ -1.08
MKKS-202ENST00000399054 WIZO95785 1651 aa8.28□□□□□ -1.08
MKKS-202ENST00000399054 RUSC2Q8N2Y8 1516 aa8.26□□□□□ -1.09
MKKS-202ENST00000399054 RANGAP1P46060 587 aaPredicted RBP8.24□□□□□ -1.09
MKKS-202ENST00000399054 TNIKQ9UKE5 1360 aa8.22□□□□□ -1.09
MKKS-202ENST00000399054 RBM42Q9BTD8 480 aaKnown RBP8.21□□□□□ -1.09
MKKS-202ENST00000399054 PABPN1Q86U42 306 aaKnown RBP eCLIP8.21□□□□□ -1.1
MKKS-202ENST00000399054 EIF4G1Q04637 1599 aaKnown RBP8.18□□□□□ -1.1
MKKS-202ENST00000399054 ITGAEP38570 1179 aa8.17□□□□□ -1.1
MKKS-202ENST00000399054 VASPP50552 380 aaPredicted RBP8.16□□□□□ -1.1
MKKS-202ENST00000399054 RBM19Q9Y4C8 960 aaKnown RBP8.16□□□□□ -1.1
MKKS-202ENST00000399054 AMER1Q5JTC6 1135 aaPredicted RBP8.15□□□□□ -1.1
MKKS-202ENST00000399054 AKT1S1Q96B36 256 aa8.15□□□□□ -1.1
MKKS-202ENST00000399054 STAG3Q9UJ98 1225 aa8.15□□□□□ -1.11
MKKS-202ENST00000399054 DHX57Q6P158 1386 aaKnown RBP8.12□□□□□ -1.11
MKKS-202ENST00000399054 CLSPNQ9HAW4 1339 aa8.12□□□□□ -1.11
MKKS-202ENST00000399054 BAZ1AQ9NRL2 1556 aaPredicted RBP8.1□□□□□ -1.11
MKKS-202ENST00000399054 CLIP1P30622 1438 aa8.1□□□□□ -1.11
MKKS-202ENST00000399054 GOLGA3Q08378 1498 aa8.09□□□□□ -1.11
MKKS-202ENST00000399054 TRIM52Q96A61 297 aa8.09□□□□□ -1.11
MKKS-202ENST00000399054 HIRIP3Q9BW71 556 aaPredicted RBP8.08□□□□□ -1.12
MKKS-202ENST00000399054 DDX10Q13206 875 aaKnown RBP8.08□□□□□ -1.12
MKKS-202ENST00000399054 KANK4Q5T7N3 995 aaPredicted RBP8.08□□□□□ -1.12
MKKS-202ENST00000399054 DAXXQ9UER7 740 aaPredicted RBP8.07□□□□□ -1.12
MKKS-202ENST00000399054 NACADO15069 1562 aa8.06□□□□□ -1.12
MKKS-202ENST00000399054 IFNLR1Q8IU57 520 aaPredicted RBP8.06□□□□□ -1.12
MKKS-202ENST00000399054 REM2Q8IYK8 340 aaPredicted RBP8.06□□□□□ -1.12
MKKS-202ENST00000399054 SPDYE1Q8NFV5 336 aaPredicted RBP8.06□□□□□ -1.12
MKKS-202ENST00000399054 VPS8Q8N3P4 1428 aa8.05□□□□□ -1.12
MKKS-202ENST00000399054 SMARCA2P51531 1590 aa8.04□□□□□ -1.12
MKKS-202ENST00000399054 IRX6P78412 446 aaPredicted RBP8.04□□□□□ -1.12
MKKS-202ENST00000399054 EEA1Q15075 1411 aa8.02□□□□□ -1.13
MKKS-202ENST00000399054 RAPGEF2Q9Y4G8 1499 aa8.02□□□□□ -1.13
MKKS-202ENST00000399054 SIN3AQ96ST3 1273 aa8.01□□□□□ -1.13
MKKS-202ENST00000399054 TOP2AP11388 1531 aaKnown RBP8.01□□□□□ -1.13
MKKS-202ENST00000399054 PLCD3Q8N3E9 789 aa8□□□□□ -1.13
MKKS-202ENST00000399054 KIF21BO75037 1637 aa8□□□□□ -1.13
MKKS-202ENST00000399054 NEFLP07196 543 aa7.99□□□□□ -1.13
MKKS-202ENST00000399054 CEP164Q9UPV0 1460 aa7.99□□□□□ -1.13
MKKS-202ENST00000399054 CLEC11AQ9Y240 323 aa7.97□□□□□ -1.13
MKKS-202ENST00000399054 PPP1R15AO75807 674 aaPredicted RBP7.96□□□□□ -1.13
MKKS-202ENST00000399054 KLHL34Q8N239 644 aa7.96□□□□□ -1.13
MKKS-202ENST00000399054 SYNJ1O43426 1573 aa7.96□□□□□ -1.14
MKKS-202ENST00000399054 PLEKHG5O94827 1062 aa7.96□□□□□ -1.14
MKKS-202ENST00000399054 TIMELESSQ9UNS1 1208 aa7.96□□□□□ -1.14
MKKS-202ENST00000399054 PITPNM1O00562 1244 aa7.95□□□□□ -1.14
MKKS-202ENST00000399054 PRR29P0C7W0 189 aa7.95□□□□□ -1.14
MKKS-202ENST00000399054 SPOCK2Q92563 424 aa7.95□□□□□ -1.14
MKKS-202ENST00000399054 ZBTB47Q9UFB7 747 aaPredicted RBP7.94□□□□□ -1.14
MKKS-202ENST00000399054 WDR97A6NE52 1622 aa7.94□□□□□ -1.14
MKKS-202ENST00000399054 SMARCA4P51532 1647 aa7.93□□□□□ -1.14
MKKS-202ENST00000399054 RAB3GAP2Q9H2M9 1393 aa7.93□□□□□ -1.14
MKKS-202ENST00000399054 MAPKBP1O60336 1514 aa7.92□□□□□ -1.14
MKKS-202ENST00000399054 DEKP35659 375 aaKnown RBP7.92□□□□□ -1.14
MKKS-202ENST00000399054 ERICH6Q7L0X2 663 aa7.92□□□□□ -1.14
MKKS-202ENST00000399054 ANO8Q9HCE9 1232 aaPredicted RBP7.92□□□□□ -1.14
MKKS-202ENST00000399054 FANCIQ9NVI1 1328 aa7.91□□□□□ -1.14
MKKS-202ENST00000399054 ARAP1Q96P48 1450 aa7.91□□□□□ -1.14
MKKS-202ENST00000399054 CREBZFQ9NS37 354 aa7.9□□□□□ -1.14
MKKS-202ENST00000399054 CCNB3Q8WWL7 1395 aa7.9□□□□□ -1.14
MKKS-202ENST00000399054 RRBP1Q9P2E9 1410 aaKnown RBP7.9□□□□□ -1.15
MKKS-202ENST00000399054 ANP32CO43423 234 aa7.9□□□□□ -1.15
MKKS-202ENST00000399054 NBR1Q14596 966 aa7.9□□□□□ -1.15
MKKS-202ENST00000399054 CDK11AQ9UQ88 783 aaPredicted RBP7.9□□□□□ -1.15
MKKS-202ENST00000399054 HNRNPUQ00839 825 aaKnown RBP eCLIP7.89□□□□□ -1.15
MKKS-202ENST00000399054 PAK3O75914 559 aaPredicted RBP7.88□□□□□ -1.15
MKKS-202ENST00000399054 BAZ1BQ9UIG0 1483 aaKnown RBP7.88□□□□□ -1.15
MKKS-202ENST00000399054 CCER2I3L3R5 266 aa7.87□□□□□ -1.15
MKKS-202ENST00000399054 B4GALNT3Q6L9W6 998 aa7.87□□□□□ -1.15
MKKS-202ENST00000399054 CCDC184Q52MB2 194 aa7.86□□□□□ -1.15
MKKS-202ENST00000399054 CUX2O14529 1486 aa7.86□□□□□ -1.15
MKKS-202ENST00000399054 PKD2Q13563 968 aa7.85□□□□□ -1.15
MKKS-202ENST00000399054 FAM50AQ14320 339 aaKnown RBP7.85□□□□□ -1.15
MKKS-202ENST00000399054 MNX1P50219 401 aaPredicted RBP7.85□□□□□ -1.15
MKKS-202ENST00000399054 SALL2Q9Y467 1007 aaPredicted RBP7.84□□□□□ -1.16
MKKS-202ENST00000399054 SENP3-EIF4A1A0A087X0R7 540 aa7.83□□□□□ -1.16
MKKS-202ENST00000399054 CCDC136Q96JN2 1154 aa7.83□□□□□ -1.16
MKKS-202ENST00000399054 TAOK2Q9UL54 1235 aa7.83□□□□□ -1.16
MKKS-202ENST00000399054 SETD5Q9C0A6 1442 aa7.83□□□□□ -1.16
MKKS-202ENST00000399054 NUBP1P53384 320 aa7.81□□□□□ -1.16
MKKS-202ENST00000399054 FXR2P51116 673 aaKnown RBP eCLIP7.8□□□□□ -1.16
MKKS-202ENST00000399054 IL27Q8NEV9 243 aa7.8□□□□□ -1.16
MKKS-202ENST00000399054 PHLDB1Q86UU1 1377 aa7.8□□□□□ -1.16
MKKS-202ENST00000399054 TULP1O00294 542 aaPredicted RBP7.8□□□□□ -1.16
MKKS-202ENST00000399054 ATP1B4Q9UN42 357 aaPredicted RBP7.8□□□□□ -1.16
MKKS-202ENST00000399054 PRXQ9BXM0 1461 aa7.8□□□□□ -1.16
MKKS-202ENST00000399054 PPP4R2Q9NY27 417 aa7.79□□□□□ -1.16
MKKS-202ENST00000399054 NOP58Q9Y2X3 529 aaKnown RBP7.79□□□□□ -1.16
MKKS-202ENST00000399054 ARHGAP35Q9NRY4 1499 aa7.79□□□□□ -1.16
MKKS-202ENST00000399054 CHRDL2Q6WN34 429 aa7.79□□□□□ -1.16
MKKS-202ENST00000399054 P3H3Q8IVL6 736 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms