RNA–Protein interactions for RNA: ENST00000399027.3

CYCSP55-201, Transcript of cytochrome c, somatic pseudogene 55, humanhuman

BASIC

Gene CYCSP55, Length 311 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP55-201ENST00000399027 RIMBP3Q9UFD9 1639 aa17.49■□□□□ 0.39
CYCSP55-201ENST00000399027 CTTNBP2Q8WZ74 1663 aa17.48■□□□□ 0.39
CYCSP55-201ENST00000399027 ARHGEF11O15085 1522 aa17.47■□□□□ 0.39
CYCSP55-201ENST00000399027 CSRNP3Q8WYN3 585 aa17.46■□□□□ 0.39
CYCSP55-201ENST00000399027 KIF21BO75037 1637 aa17.45■□□□□ 0.38
CYCSP55-201ENST00000399027 KIAA0586Q9BVV6 1533 aa17.45■□□□□ 0.38
CYCSP55-201ENST00000399027 IQGAP2Q13576 1575 aa17.4■□□□□ 0.38
CYCSP55-201ENST00000399027 ERCC6L2Q5T890 1561 aa17.36■□□□□ 0.37
CYCSP55-201ENST00000399027 FAM9AQ8IZU1 332 aaPredicted RBP17.36■□□□□ 0.37
CYCSP55-201ENST00000399027 ARAP1Q96P48 1450 aa17.33■□□□□ 0.37
CYCSP55-201ENST00000399027 JPH4Q96JJ6 628 aa17.33■□□□□ 0.36
CYCSP55-201ENST00000399027 UGGT2Q9NYU1 1516 aa17.31■□□□□ 0.36
CYCSP55-201ENST00000399027 PRG4Q92954 1404 aaPredicted RBP17.31■□□□□ 0.36
CYCSP55-201ENST00000399027 GOLGA3Q08378 1498 aa17.28■□□□□ 0.36
CYCSP55-201ENST00000399027 DISP1Q96F81 1524 aa17.26■□□□□ 0.35
CYCSP55-201ENST00000399027 KIAA0556O60303 1618 aa17.25■□□□□ 0.35
CYCSP55-201ENST00000399027 CARMIL2Q6F5E8 1435 aa17.22■□□□□ 0.35
CYCSP55-201ENST00000399027 SAMD9Q5K651 1589 aa17.22■□□□□ 0.35
CYCSP55-201ENST00000399027 CYB5RLQ6IPT4 315 aa17.18■□□□□ 0.34
CYCSP55-201ENST00000399027 TNIKQ9UKE5 1360 aa17.15■□□□□ 0.34
CYCSP55-201ENST00000399027 PHF23Q9BUL5 403 aaPredicted RBP17.15■□□□□ 0.34
CYCSP55-201ENST00000399027 EFCAB5A4FU69 1503 aa17.14■□□□□ 0.33
CYCSP55-201ENST00000399027 ADCY10Q96PN6 1610 aa17.11■□□□□ 0.33
CYCSP55-201ENST00000399027 UBTFP17480 764 aaKnown RBP17.11■□□□□ 0.33
CYCSP55-201ENST00000399027 PTPRGP23470 1445 aa17.11■□□□□ 0.33
CYCSP55-201ENST00000399027 EHMT2Q96KQ7 1210 aa17.08■□□□□ 0.32
CYCSP55-201ENST00000399027 UHRF1BP1LA0JNW5 1464 aa17.06■□□□□ 0.32
CYCSP55-201ENST00000399027 ABCA8O94911 1581 aa17.05■□□□□ 0.32
CYCSP55-201ENST00000399027 ABCC2Q92887 1545 aa17.05■□□□□ 0.32
CYCSP55-201ENST00000399027 ARHGAP35Q9NRY4 1499 aa17.04■□□□□ 0.32
CYCSP55-201ENST00000399027 UACAQ9BZF9 1416 aa17.04■□□□□ 0.32
CYCSP55-201ENST00000399027 FHOD3Q2V2M9 1422 aa17.01■□□□□ 0.31
CYCSP55-201ENST00000399027 RAPGEF6Q8TEU7 1601 aa16.99■□□□□ 0.31
CYCSP55-201ENST00000399027 PLB1Q6P1J6 1458 aa16.99■□□□□ 0.31
CYCSP55-201ENST00000399027 MAPKBP1O60336 1514 aa16.98■□□□□ 0.31
CYCSP55-201ENST00000399027 RANGAP1P46060 587 aaPredicted RBP16.98■□□□□ 0.31
CYCSP55-201ENST00000399027 P3H3Q8IVL6 736 aa16.98■□□□□ 0.31
CYCSP55-201ENST00000399027 ZCCHC11Q5TAX3 1644 aaKnown RBP16.98■□□□□ 0.31
CYCSP55-201ENST00000399027 TTBK1Q5TCY1 1321 aaPredicted RBP16.97■□□□□ 0.31
CYCSP55-201ENST00000399027 KDM5BQ9UGL1 1544 aa16.97■□□□□ 0.31
CYCSP55-201ENST00000399027 CLIP1P30622 1438 aa16.94■□□□□ 0.3
CYCSP55-201ENST00000399027 LOC105371045A0A1W2PR82 267 aa16.93■□□□□ 0.3
CYCSP55-201ENST00000399027 KIF13AQ9H1H9 1805 aa16.92■□□□□ 0.3
CYCSP55-201ENST00000399027 FMN1Q68DA7 1419 aa16.92■□□□□ 0.3
CYCSP55-201ENST00000399027 CEP162Q5TB80 1403 aa16.91■□□□□ 0.3
CYCSP55-201ENST00000399027 NPM1P06748 294 aaKnown RBP eCLIP16.9■□□□□ 0.3
CYCSP55-201ENST00000399027 NUP153P49790 1475 aaKnown RBP16.89■□□□□ 0.29
CYCSP55-201ENST00000399027 LRRIQ1Q96JM4 1722 aa16.89■□□□□ 0.29
CYCSP55-201ENST00000399027 HECW1Q76N89 1606 aa16.88■□□□□ 0.29
CYCSP55-201ENST00000399027 DIP2BQ9P265 1576 aa16.86■□□□□ 0.29
CYCSP55-201ENST00000399027 ATP10BO94823 1461 aa16.86■□□□□ 0.29
CYCSP55-201ENST00000399027 PCF11O94913 1555 aaKnown RBP16.85■□□□□ 0.29
CYCSP55-201ENST00000399027 ASXL2Q76L83 1435 aa16.84■□□□□ 0.29
CYCSP55-201ENST00000399027 ABCC10Q5T3U5 1492 aa16.84■□□□□ 0.29
CYCSP55-201ENST00000399027 CASKIN1Q8WXD9 1431 aa16.81■□□□□ 0.28
CYCSP55-201ENST00000399027 GLI2P10070 1586 aa16.81■□□□□ 0.28
CYCSP55-201ENST00000399027 FYCO1Q9BQS8 1478 aa16.8■□□□□ 0.28
CYCSP55-201ENST00000399027 WDR7Q9Y4E6 1490 aa16.8■□□□□ 0.28
CYCSP55-201ENST00000399027 EPRSP07814 1512 aaKnown RBP16.79■□□□□ 0.28
CYCSP55-201ENST00000399027 CDK13Q14004 1512 aaKnown RBP16.77■□□□□ 0.28
CYCSP55-201ENST00000399027 MAP3K4Q9Y6R4 1608 aa16.77■□□□□ 0.27
CYCSP55-201ENST00000399027 CCDC18Q5T9S5 1454 aa16.75■□□□□ 0.27
CYCSP55-201ENST00000399027 TRHP20396 242 aaPredicted RBP16.75■□□□□ 0.27
CYCSP55-201ENST00000399027 CFAP43Q8NDM7 1665 aa16.75■□□□□ 0.27
CYCSP55-201ENST00000399027 PPRC1Q5VV67 1664 aaKnown RBP16.72■□□□□ 0.27
CYCSP55-201ENST00000399027 ARID3CA6NKF2 412 aa16.72■□□□□ 0.27
CYCSP55-201ENST00000399027 TSPOAP1O95153 1857 aa16.71■□□□□ 0.27
CYCSP55-201ENST00000399027 VPS8Q8N3P4 1428 aa16.71■□□□□ 0.27
CYCSP55-201ENST00000399027 ABCA9Q8IUA7 1624 aa16.71■□□□□ 0.27
CYCSP55-201ENST00000399027 FAM69CQ0P6D2 419 aa16.7■□□□□ 0.26
CYCSP55-201ENST00000399027 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.68■□□□□ 0.26
CYCSP55-201ENST00000399027 HNRNPUL2Q1KMD3 747 aaKnown RBP16.68■□□□□ 0.26
CYCSP55-201ENST00000399027 ATP1B4Q9UN42 357 aaPredicted RBP16.67■□□□□ 0.26
CYCSP55-201ENST00000399027 PLEKHD1A6NEE1 506 aa16.66■□□□□ 0.26
CYCSP55-201ENST00000399027 MAGI3Q5TCQ9 1506 aa16.65■□□□□ 0.26
CYCSP55-201ENST00000399027 KIF14Q15058 1648 aa16.64■□□□□ 0.25
CYCSP55-201ENST00000399027 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.64■□□□□ 0.25
CYCSP55-201ENST00000399027 TROQ12816 1431 aaPredicted RBP16.63■□□□□ 0.25
CYCSP55-201ENST00000399027 CDK11AQ9UQ88 783 aaPredicted RBP16.63■□□□□ 0.25
CYCSP55-201ENST00000399027 TIAM1Q13009 1591 aa16.63■□□□□ 0.25
CYCSP55-201ENST00000399027 TTC37Q6PGP7 1564 aa16.63■□□□□ 0.25
CYCSP55-201ENST00000399027 MAP3K1Q13233 1512 aa16.62■□□□□ 0.25
CYCSP55-201ENST00000399027 KCNH8Q96L42 1107 aa16.62■□□□□ 0.25
CYCSP55-201ENST00000399027 MYO5CQ9NQX4 1742 aa16.61■□□□□ 0.25
CYCSP55-201ENST00000399027 CD109Q6YHK3 1445 aa16.6■□□□□ 0.25
CYCSP55-201ENST00000399027 TEX14Q8IWB6 1497 aa16.59■□□□□ 0.25
CYCSP55-201ENST00000399027 EHBP1L1Q8N3D4 1523 aa16.59■□□□□ 0.25
CYCSP55-201ENST00000399027 CDC42BPAQ5VT25 1732 aa16.56■□□□□ 0.24
CYCSP55-201ENST00000399027 CFAP74Q9C0B2 1584 aa16.55■□□□□ 0.24
CYCSP55-201ENST00000399027 ARAP3Q8WWN8 1544 aa16.55■□□□□ 0.24
CYCSP55-201ENST00000399027 CDC42BPBQ9Y5S2 1711 aa16.55■□□□□ 0.24
CYCSP55-201ENST00000399027 PREX2Q70Z35 1606 aa16.55■□□□□ 0.24
CYCSP55-201ENST00000399027 SUPT6HQ7KZ85 1726 aaKnown RBP16.53■□□□□ 0.24
CYCSP55-201ENST00000399027 KDM6BO15054 1643 aa16.53■□□□□ 0.24
CYCSP55-201ENST00000399027 LRRC9Q6ZRR7 1453 aa16.52■□□□□ 0.23
CYCSP55-201ENST00000399027 MTUS2Q5JR59 1369 aa16.51■□□□□ 0.23
CYCSP55-201ENST00000399027 NEO1Q92859 1461 aa16.51■□□□□ 0.23
CYCSP55-201ENST00000399027 PLCH2O75038 1416 aa16.51■□□□□ 0.23
CYCSP55-201ENST00000399027 ITSN2Q9NZM3 1697 aa16.5■□□□□ 0.23
CYCSP55-201ENST00000399027 PHLDB1Q86UU1 1377 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms