RNA–Protein interactions for RNA: ENST00000398519.9

CSNK1D-204, Transcript of casein kinase 1 delta, humanhuman

TSL 5 BASIC

Gene CSNK1D, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-204ENST00000398519 SHROOM2Q13796 1616 aa28.67■■■□□ 2.18
CSNK1D-204ENST00000398519 ARHGEF11O15085 1522 aa28.63■■■□□ 2.17
CSNK1D-204ENST00000398519 CTTNBP2Q8WZ74 1663 aa28.63■■■□□ 2.17
CSNK1D-204ENST00000398519 IQGAP2Q13576 1575 aa28.62■■■□□ 2.17
CSNK1D-204ENST00000398519 RIMBP3CA6NJZ7 1639 aa28.6■■■□□ 2.17
CSNK1D-204ENST00000398519 RIMBP3BA6NNM3 1639 aa28.6■■■□□ 2.17
CSNK1D-204ENST00000398519 RIMBP3Q9UFD9 1639 aa28.6■■■□□ 2.17
CSNK1D-204ENST00000398519 JPH4Q96JJ6 628 aa28.58■■■□□ 2.17
CSNK1D-204ENST00000398519 GOLGA3Q08378 1498 aa28.56■■■□□ 2.16
CSNK1D-204ENST00000398519 ERCC6L2Q5T890 1561 aa28.54■■■□□ 2.16
CSNK1D-204ENST00000398519 EHMT2Q96KQ7 1210 aa28.53■■■□□ 2.16
CSNK1D-204ENST00000398519 PRG4Q92954 1404 aaPredicted RBP28.52■■■□□ 2.16
CSNK1D-204ENST00000398519 UGGT2Q9NYU1 1516 aa28.47■■■□□ 2.15
CSNK1D-204ENST00000398519 ARAP1Q96P48 1450 aa28.43■■■□□ 2.14
CSNK1D-204ENST00000398519 UBTFP17480 764 aaKnown RBP28.42■■■□□ 2.14
CSNK1D-204ENST00000398519 DISP1Q96F81 1524 aa28.4■■■□□ 2.14
CSNK1D-204ENST00000398519 CARMIL2Q6F5E8 1435 aa28.36■■■□□ 2.13
CSNK1D-204ENST00000398519 KIAA0556O60303 1618 aa28.35■■■□□ 2.13
CSNK1D-204ENST00000398519 CYB5RLQ6IPT4 315 aa28.3■■■□□ 2.12
CSNK1D-204ENST00000398519 SAMD9Q5K651 1589 aa28.29■■■□□ 2.12
CSNK1D-204ENST00000398519 TNIKQ9UKE5 1360 aa28.26■■■□□ 2.11
CSNK1D-204ENST00000398519 RANGAP1P46060 587 aaPredicted RBP28.26■■■□□ 2.11
CSNK1D-204ENST00000398519 LOC105371045A0A1W2PR82 267 aa28.23■■■□□ 2.11
CSNK1D-204ENST00000398519 EFCAB5A4FU69 1503 aa28.21■■■□□ 2.11
CSNK1D-204ENST00000398519 PTPRGP23470 1445 aa28.2■■■□□ 2.11
CSNK1D-204ENST00000398519 P3H3Q8IVL6 736 aa28.17■■■□□ 2.1
CSNK1D-204ENST00000398519 TTBK1Q5TCY1 1321 aaPredicted RBP28.17■■■□□ 2.1
CSNK1D-204ENST00000398519 ARHGAP35Q9NRY4 1499 aa28.14■■■□□ 2.09
CSNK1D-204ENST00000398519 FHOD3Q2V2M9 1422 aa28.12■■■□□ 2.09
CSNK1D-204ENST00000398519 ADCY10Q96PN6 1610 aa28.07■■■□□ 2.08
CSNK1D-204ENST00000398519 CLIP1P30622 1438 aa28.06■■■□□ 2.08
CSNK1D-204ENST00000398519 UACAQ9BZF9 1416 aa28.05■■■□□ 2.08
CSNK1D-204ENST00000398519 CEP162Q5TB80 1403 aa28.04■■■□□ 2.08
CSNK1D-204ENST00000398519 PLB1Q6P1J6 1458 aa28.03■■■□□ 2.08
CSNK1D-204ENST00000398519 ABCA8O94911 1581 aa28.02■■■□□ 2.08
CSNK1D-204ENST00000398519 ABCC2Q92887 1545 aa28.01■■■□□ 2.07
CSNK1D-204ENST00000398519 UHRF1BP1LA0JNW5 1464 aa28■■■□□ 2.07
CSNK1D-204ENST00000398519 RAPGEF6Q8TEU7 1601 aa27.93■■■□□ 2.06
CSNK1D-204ENST00000398519 FMN1Q68DA7 1419 aa27.92■■■□□ 2.06
CSNK1D-204ENST00000398519 KDM5BQ9UGL1 1544 aa27.87■■■□□ 2.05
CSNK1D-204ENST00000398519 NPM1P06748 294 aaKnown RBP eCLIP27.85■■■□□ 2.05
CSNK1D-204ENST00000398519 ZCCHC11Q5TAX3 1644 aaKnown RBP27.85■■■□□ 2.05
CSNK1D-204ENST00000398519 NUP153P49790 1475 aaKnown RBP27.84■■■□□ 2.05
CSNK1D-204ENST00000398519 MAPKBP1O60336 1514 aa27.81■■■□□ 2.04
CSNK1D-204ENST00000398519 PCF11O94913 1555 aaKnown RBP27.79■■■□□ 2.04
CSNK1D-204ENST00000398519 HECW1Q76N89 1606 aa27.78■■■□□ 2.04
CSNK1D-204ENST00000398519 ATP10BO94823 1461 aa27.77■■■□□ 2.04
CSNK1D-204ENST00000398519 ARID3CA6NKF2 412 aa27.77■■■□□ 2.04
CSNK1D-204ENST00000398519 CASKIN1Q8WXD9 1431 aa27.76■■■□□ 2.03
CSNK1D-204ENST00000398519 ASXL2Q76L83 1435 aa27.72■■■□□ 2.03
CSNK1D-204ENST00000398519 FYCO1Q9BQS8 1478 aa27.72■■■□□ 2.03
CSNK1D-204ENST00000398519 ATP1B4Q9UN42 357 aaPredicted RBP27.7■■■□□ 2.03
CSNK1D-204ENST00000398519 LRRIQ1Q96JM4 1722 aa27.69■■■□□ 2.02
CSNK1D-204ENST00000398519 EPRSP07814 1512 aaKnown RBP27.69■■■□□ 2.02
CSNK1D-204ENST00000398519 CDK13Q14004 1512 aaKnown RBP27.68■■■□□ 2.02
CSNK1D-204ENST00000398519 VPS8Q8N3P4 1428 aa27.67■■■□□ 2.02
CSNK1D-204ENST00000398519 WDR7Q9Y4E6 1490 aa27.64■■■□□ 2.02
CSNK1D-204ENST00000398519 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.63■■■□□ 2.01
CSNK1D-204ENST00000398519 HNRNPUL2Q1KMD3 747 aaKnown RBP27.63■■■□□ 2.01
CSNK1D-204ENST00000398519 ABCC10Q5T3U5 1492 aa27.63■■■□□ 2.01
CSNK1D-204ENST00000398519 DIP2BQ9P265 1576 aa27.62■■■□□ 2.01
CSNK1D-204ENST00000398519 CCDC18Q5T9S5 1454 aa27.6■■■□□ 2.01
CSNK1D-204ENST00000398519 TRHP20396 242 aaPredicted RBP27.59■■■□□ 2.01
CSNK1D-204ENST00000398519 KIF13AQ9H1H9 1805 aa27.59■■■□□ 2.01
CSNK1D-204ENST00000398519 FAM69CQ0P6D2 419 aa27.52■■■□□ 2
CSNK1D-204ENST00000398519 PLEKHD1A6NEE1 506 aa27.52■■■□□ 2
CSNK1D-204ENST00000398519 GLI2P10070 1586 aa27.51■■□□□ 1.99
CSNK1D-204ENST00000398519 KCNH8Q96L42 1107 aa27.49■■□□□ 1.99
CSNK1D-204ENST00000398519 CDK11AQ9UQ88 783 aaPredicted RBP27.48■■□□□ 1.99
CSNK1D-204ENST00000398519 MAGI3Q5TCQ9 1506 aa27.47■■□□□ 1.99
CSNK1D-204ENST00000398519 CFAP43Q8NDM7 1665 aa27.46■■□□□ 1.99
CSNK1D-204ENST00000398519 TROQ12816 1431 aaPredicted RBP27.44■■□□□ 1.98
CSNK1D-204ENST00000398519 TIAM1Q13009 1591 aa27.43■■□□□ 1.98
CSNK1D-204ENST00000398519 MAP3K4Q9Y6R4 1608 aa27.42■■□□□ 1.98
CSNK1D-204ENST00000398519 ABCA9Q8IUA7 1624 aa27.41■■□□□ 1.98
CSNK1D-204ENST00000398519 KIF14Q15058 1648 aa27.39■■□□□ 1.97
CSNK1D-204ENST00000398519 MAP3K1Q13233 1512 aa27.38■■□□□ 1.97
CSNK1D-204ENST00000398519 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.37■■□□□ 1.97
CSNK1D-204ENST00000398519 TTC37Q6PGP7 1564 aa27.35■■□□□ 1.97
CSNK1D-204ENST00000398519 TSPOAP1O95153 1857 aa27.34■■□□□ 1.97
CSNK1D-204ENST00000398519 MTUS2Q5JR59 1369 aa27.34■■□□□ 1.97
CSNK1D-204ENST00000398519 PPRC1Q5VV67 1664 aaKnown RBP27.33■■□□□ 1.97
CSNK1D-204ENST00000398519 EHBP1L1Q8N3D4 1523 aa27.33■■□□□ 1.97
CSNK1D-204ENST00000398519 CD109Q6YHK3 1445 aa27.33■■□□□ 1.97
CSNK1D-204ENST00000398519 LRRC9Q6ZRR7 1453 aa27.3■■□□□ 1.96
CSNK1D-204ENST00000398519 APLP2Q06481 763 aa27.27■■□□□ 1.96
CSNK1D-204ENST00000398519 KANK4Q5T7N3 995 aaPredicted RBP27.25■■□□□ 1.95
CSNK1D-204ENST00000398519 TEX14Q8IWB6 1497 aa27.22■■□□□ 1.95
CSNK1D-204ENST00000398519 MYO5CQ9NQX4 1742 aa27.22■■□□□ 1.95
CSNK1D-204ENST00000398519 SUPT6HQ7KZ85 1726 aaKnown RBP27.2■■□□□ 1.94
CSNK1D-204ENST00000398519 PLCH2O75038 1416 aa27.18■■□□□ 1.94
CSNK1D-204ENST00000398519 NCOA2Q15596 1464 aa27.17■■□□□ 1.94
CSNK1D-204ENST00000398519 CDC42BPAQ5VT25 1732 aa27.16■■□□□ 1.94
CSNK1D-204ENST00000398519 ARAP3Q8WWN8 1544 aa27.15■■□□□ 1.94
CSNK1D-204ENST00000398519 PREX2Q70Z35 1606 aa27.15■■□□□ 1.94
CSNK1D-204ENST00000398519 FANCAO15360 1455 aa27.13■■□□□ 1.93
CSNK1D-204ENST00000398519 CDC42BPBQ9Y5S2 1711 aa27.13■■□□□ 1.93
CSNK1D-204ENST00000398519 GPATCH8Q9UKJ3 1502 aaKnown RBP27.13■■□□□ 1.93
CSNK1D-204ENST00000398519 NEO1Q92859 1461 aa27.12■■□□□ 1.93
CSNK1D-204ENST00000398519 CCNB3Q8WWL7 1395 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms