RNA–Protein interactions for RNA: ENST00000398493.5

MBD1-208, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-208ENST00000398493 CLASP1Q7Z460 1538 aa29.25■■■□□ 2.27
MBD1-208ENST00000398493 GOLGA3Q08378 1498 aa29.2■■■□□ 2.27
MBD1-208ENST00000398493 KIAA0586Q9BVV6 1533 aa29.2■■■□□ 2.26
MBD1-208ENST00000398493 UBTFP17480 764 aaKnown RBP29.17■■■□□ 2.26
MBD1-208ENST00000398493 JPH4Q96JJ6 628 aa29.13■■■□□ 2.25
MBD1-208ENST00000398493 IQGAP2Q13576 1575 aa29.08■■■□□ 2.25
MBD1-208ENST00000398493 CTTNBP2Q8WZ74 1663 aa29.06■■■□□ 2.24
MBD1-208ENST00000398493 SHROOM2Q13796 1616 aa29.04■■■□□ 2.24
MBD1-208ENST00000398493 RANGAP1P46060 587 aaPredicted RBP29.02■■■□□ 2.24
MBD1-208ENST00000398493 PRG4Q92954 1404 aaPredicted RBP29.01■■■□□ 2.23
MBD1-208ENST00000398493 ERCC6L2Q5T890 1561 aa29■■■□□ 2.23
MBD1-208ENST00000398493 ARHGEF11O15085 1522 aa28.97■■■□□ 2.23
MBD1-208ENST00000398493 TNIKQ9UKE5 1360 aa28.96■■■□□ 2.23
MBD1-208ENST00000398493 UGGT2Q9NYU1 1516 aa28.95■■■□□ 2.22
MBD1-208ENST00000398493 DISP1Q96F81 1524 aa28.92■■■□□ 2.22
MBD1-208ENST00000398493 RIMBP3CA6NJZ7 1639 aa28.89■■■□□ 2.22
MBD1-208ENST00000398493 RIMBP3BA6NNM3 1639 aa28.89■■■□□ 2.22
MBD1-208ENST00000398493 RIMBP3Q9UFD9 1639 aa28.89■■■□□ 2.22
MBD1-208ENST00000398493 P3H3Q8IVL6 736 aa28.87■■■□□ 2.21
MBD1-208ENST00000398493 PCGF6Q9BYE7 350 aa28.85■■■□□ 2.21
MBD1-208ENST00000398493 CARMIL2Q6F5E8 1435 aa28.84■■■□□ 2.21
MBD1-208ENST00000398493 KIAA0556O60303 1618 aa28.82■■■□□ 2.2
MBD1-208ENST00000398493 TTBK1Q5TCY1 1321 aaPredicted RBP28.81■■■□□ 2.2
MBD1-208ENST00000398493 ARAP1Q96P48 1450 aa28.79■■■□□ 2.2
MBD1-208ENST00000398493 SAMD9Q5K651 1589 aa28.79■■■□□ 2.2
MBD1-208ENST00000398493 TRIM26Q12899 539 aaPredicted RBP28.78■■■□□ 2.2
MBD1-208ENST00000398493 ARHGAP35Q9NRY4 1499 aa28.76■■■□□ 2.19
MBD1-208ENST00000398493 CYB5RLQ6IPT4 315 aa28.76■■■□□ 2.19
MBD1-208ENST00000398493 FHOD3Q2V2M9 1422 aa28.74■■■□□ 2.19
MBD1-208ENST00000398493 CLIP1P30622 1438 aa28.73■■■□□ 2.19
MBD1-208ENST00000398493 CEP162Q5TB80 1403 aa28.73■■■□□ 2.19
MBD1-208ENST00000398493 PTPRGP23470 1445 aa28.72■■■□□ 2.19
MBD1-208ENST00000398493 EFCAB5A4FU69 1503 aa28.7■■■□□ 2.19
MBD1-208ENST00000398493 PLB1Q6P1J6 1458 aa28.56■■■□□ 2.16
MBD1-208ENST00000398493 UACAQ9BZF9 1416 aa28.53■■■□□ 2.16
MBD1-208ENST00000398493 ABCA8O94911 1581 aa28.48■■■□□ 2.15
MBD1-208ENST00000398493 FMN1Q68DA7 1419 aa28.47■■■□□ 2.15
MBD1-208ENST00000398493 ADCY10Q96PN6 1610 aa28.47■■■□□ 2.15
MBD1-208ENST00000398493 ABCC2Q92887 1545 aa28.43■■■□□ 2.14
MBD1-208ENST00000398493 UHRF1BP1LA0JNW5 1464 aa28.43■■■□□ 2.14
MBD1-208ENST00000398493 ARID3CA6NKF2 412 aa28.43■■■□□ 2.14
MBD1-208ENST00000398493 RAPGEF6Q8TEU7 1601 aa28.39■■■□□ 2.14
MBD1-208ENST00000398493 ATP1B4Q9UN42 357 aaPredicted RBP28.39■■■□□ 2.13
MBD1-208ENST00000398493 NUP153P49790 1475 aaKnown RBP28.37■■■□□ 2.13
MBD1-208ENST00000398493 HRCP23327 699 aa28.36■■■□□ 2.13
MBD1-208ENST00000398493 CASKIN1Q8WXD9 1431 aa28.34■■■□□ 2.13
MBD1-208ENST00000398493 PCF11O94913 1555 aaKnown RBP28.33■■■□□ 2.13
MBD1-208ENST00000398493 VPS8Q8N3P4 1428 aa28.33■■■□□ 2.13
MBD1-208ENST00000398493 KDM5BQ9UGL1 1544 aa28.32■■■□□ 2.12
MBD1-208ENST00000398493 ATP10BO94823 1461 aa28.3■■■□□ 2.12
MBD1-208ENST00000398493 NPM1P06748 294 aaKnown RBP eCLIP28.3■■■□□ 2.12
MBD1-208ENST00000398493 PPARGC1BQ86YN6 1023 aaKnown RBP28.28■■■□□ 2.12
MBD1-208ENST00000398493 FYCO1Q9BQS8 1478 aa28.26■■■□□ 2.11
MBD1-208ENST00000398493 HECW1Q76N89 1606 aa28.25■■■□□ 2.11
MBD1-208ENST00000398493 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.25■■■□□ 2.11
MBD1-208ENST00000398493 HNRNPUL2Q1KMD3 747 aaKnown RBP28.25■■■□□ 2.11
MBD1-208ENST00000398493 ZCCHC11Q5TAX3 1644 aaKnown RBP28.24■■■□□ 2.11
MBD1-208ENST00000398493 EPRSP07814 1512 aaKnown RBP28.24■■■□□ 2.11
MBD1-208ENST00000398493 CDK13Q14004 1512 aaKnown RBP28.24■■■□□ 2.11
MBD1-208ENST00000398493 LRRIQ1Q96JM4 1722 aa28.2■■■□□ 2.11
MBD1-208ENST00000398493 ASXL2Q76L83 1435 aa28.17■■■□□ 2.1
MBD1-208ENST00000398493 MAPKBP1O60336 1514 aa28.14■■■□□ 2.1
MBD1-208ENST00000398493 APLP2Q06481 763 aa28.13■■■□□ 2.09
MBD1-208ENST00000398493 CCDC18Q5T9S5 1454 aa28.11■■■□□ 2.09
MBD1-208ENST00000398493 PLEKHD1A6NEE1 506 aa28.08■■■□□ 2.09
MBD1-208ENST00000398493 KCNH8Q96L42 1107 aa28.07■■■□□ 2.08
MBD1-208ENST00000398493 WDR7Q9Y4E6 1490 aa28.07■■■□□ 2.08
MBD1-208ENST00000398493 MAGI3Q5TCQ9 1506 aa28.05■■■□□ 2.08
MBD1-208ENST00000398493 CDK11AQ9UQ88 783 aaPredicted RBP28.03■■■□□ 2.08
MBD1-208ENST00000398493 KANK4Q5T7N3 995 aaPredicted RBP28.02■■■□□ 2.08
MBD1-208ENST00000398493 TIAM1Q13009 1591 aa28.01■■■□□ 2.07
MBD1-208ENST00000398493 ABCC10Q5T3U5 1492 aa28■■■□□ 2.07
MBD1-208ENST00000398493 FAM69CQ0P6D2 419 aa27.98■■■□□ 2.07
MBD1-208ENST00000398493 TRHP20396 242 aaPredicted RBP27.97■■■□□ 2.07
MBD1-208ENST00000398493 TROQ12816 1431 aaPredicted RBP27.97■■■□□ 2.07
MBD1-208ENST00000398493 CFAP43Q8NDM7 1665 aa27.96■■■□□ 2.07
MBD1-208ENST00000398493 MAP3K1Q13233 1512 aa27.96■■■□□ 2.07
MBD1-208ENST00000398493 DIP2BQ9P265 1576 aa27.94■■■□□ 2.06
MBD1-208ENST00000398493 MTUS2Q5JR59 1369 aa27.93■■■□□ 2.06
MBD1-208ENST00000398493 ZEB1P37275 1124 aaPredicted RBP27.93■■■□□ 2.06
MBD1-208ENST00000398493 LRRC9Q6ZRR7 1453 aa27.91■■■□□ 2.06
MBD1-208ENST00000398493 KIF14Q15058 1648 aa27.88■■■□□ 2.05
MBD1-208ENST00000398493 KIF13AQ9H1H9 1805 aa27.87■■■□□ 2.05
MBD1-208ENST00000398493 GLI2P10070 1586 aa27.85■■■□□ 2.05
MBD1-208ENST00000398493 EHBP1L1Q8N3D4 1523 aa27.85■■■□□ 2.05
MBD1-208ENST00000398493 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.85■■■□□ 2.05
MBD1-208ENST00000398493 TTC37Q6PGP7 1564 aa27.81■■■□□ 2.04
MBD1-208ENST00000398493 ABCA9Q8IUA7 1624 aa27.79■■■□□ 2.04
MBD1-208ENST00000398493 CD109Q6YHK3 1445 aa27.79■■■□□ 2.04
MBD1-208ENST00000398493 MAP3K4Q9Y6R4 1608 aa27.76■■■□□ 2.03
MBD1-208ENST00000398493 NCOA2Q15596 1464 aa27.76■■■□□ 2.03
MBD1-208ENST00000398493 SUPT6HQ7KZ85 1726 aaKnown RBP27.71■■■□□ 2.03
MBD1-208ENST00000398493 GPATCH8Q9UKJ3 1502 aaKnown RBP27.69■■■□□ 2.02
MBD1-208ENST00000398493 TSPOAP1O95153 1857 aa27.69■■■□□ 2.02
MBD1-208ENST00000398493 PLCH2O75038 1416 aa27.69■■■□□ 2.02
MBD1-208ENST00000398493 CCNB3Q8WWL7 1395 aa27.68■■■□□ 2.02
MBD1-208ENST00000398493 PPRC1Q5VV67 1664 aaKnown RBP27.67■■■□□ 2.02
MBD1-208ENST00000398493 PHLDB1Q86UU1 1377 aa27.66■■■□□ 2.02
MBD1-208ENST00000398493 CDC42BPAQ5VT25 1732 aa27.62■■■□□ 2.01
MBD1-208ENST00000398493 MYO5CQ9NQX4 1742 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms