RNA–Protein interactions for RNA: ENST00000398411.5

CST3-203, Transcript of cystatin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CST3, Length 3,286 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CST3-203ENST00000398411 BIVM-ERCC5R4GMW8 1640 aa18.14■□□□□ 0.49
CST3-203ENST00000398411 TOP2BQ02880 1626 aa18.12■□□□□ 0.49
CST3-203ENST00000398411 NBR1Q14596 966 aa18.1■□□□□ 0.49
CST3-203ENST00000398411 CFTRP13569 1480 aa18.07■□□□□ 0.48
CST3-203ENST00000398411 CC2D2AQ9P2K1 1620 aa18.07■□□□□ 0.48
CST3-203ENST00000398411 POLR3GLQ9BT43 218 aa18.07■□□□□ 0.48
CST3-203ENST00000398411 RAB3GAP2Q9H2M9 1393 aa18.04■□□□□ 0.48
CST3-203ENST00000398411 CDK11AQ9UQ88 783 aaPredicted RBP18.03■□□□□ 0.48
CST3-203ENST00000398411 KIF21BO75037 1637 aa18.02■□□□□ 0.47
CST3-203ENST00000398411 CCNB3Q8WWL7 1395 aa18■□□□□ 0.47
CST3-203ENST00000398411 FAM9BQ8IZU0 186 aa18■□□□□ 0.47
CST3-203ENST00000398411 B4GALNT3Q6L9W6 998 aa17.96■□□□□ 0.47
CST3-203ENST00000398411 ARID3CA6NKF2 412 aa17.95■□□□□ 0.46
CST3-203ENST00000398411 CUX1P39880 1505 aa17.92■□□□□ 0.46
CST3-203ENST00000398411 DEKP35659 375 aaKnown RBP17.92■□□□□ 0.46
CST3-203ENST00000398411 RTN4Q9NQC3 1192 aaKnown RBP17.91■□□□□ 0.46
CST3-203ENST00000398411 CHIC2Q9UKJ5 165 aa17.88■□□□□ 0.45
CST3-203ENST00000398411 CADPSQ9ULU8 1353 aa17.88■□□□□ 0.45
CST3-203ENST00000398411 ARAP1Q96P48 1450 aa17.87■□□□□ 0.45
CST3-203ENST00000398411 TONSLQ96HA7 1378 aa17.87■□□□□ 0.45
CST3-203ENST00000398411 PPP1R15AO75807 674 aaPredicted RBP17.84■□□□□ 0.45
CST3-203ENST00000398411 PRKCSHP14314 528 aaPredicted RBP17.84■□□□□ 0.45
CST3-203ENST00000398411 ANO8Q9HCE9 1232 aaPredicted RBP17.84■□□□□ 0.45
CST3-203ENST00000398411 WDR97A6NE52 1622 aa17.83■□□□□ 0.44
CST3-203ENST00000398411 CCDC136Q96JN2 1154 aa17.82■□□□□ 0.44
CST3-203ENST00000398411 ERICH3Q5RHP9 1530 aa17.82■□□□□ 0.44
CST3-203ENST00000398411 NPM2Q86SE8 214 aaKnown RBP17.81■□□□□ 0.44
CST3-203ENST00000398411 CCDC184Q52MB2 194 aa17.8■□□□□ 0.44
CST3-203ENST00000398411 ZNF326Q5BKZ1 582 aaKnown RBP17.79■□□□□ 0.44
CST3-203ENST00000398411 PAK3O75914 559 aaPredicted RBP17.79■□□□□ 0.44
CST3-203ENST00000398411 SALL2Q9Y467 1007 aaPredicted RBP17.78■□□□□ 0.44
CST3-203ENST00000398411 RRP7BPQ9NSQ0 103 aa17.77■□□□□ 0.44
CST3-203ENST00000398411 FOXD1Q16676 465 aa17.77■□□□□ 0.43
CST3-203ENST00000398411 SETD5Q9C0A6 1442 aa17.77■□□□□ 0.43
CST3-203ENST00000398411 MRS2Q9HD23 443 aa17.76■□□□□ 0.43
CST3-203ENST00000398411 PRXQ9BXM0 1461 aa17.75■□□□□ 0.43
CST3-203ENST00000398411 LAMC3Q9Y6N6 1575 aa17.73■□□□□ 0.43
CST3-203ENST00000398411 PHLDB1Q86UU1 1377 aa17.72■□□□□ 0.43
CST3-203ENST00000398411 KIF27Q86VH2 1401 aa17.72■□□□□ 0.43
CST3-203ENST00000398411 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.71■□□□□ 0.43
CST3-203ENST00000398411 FANCD2Q9BXW9 1451 aa17.7■□□□□ 0.42
CST3-203ENST00000398411 DNMBPQ6XZF7 1577 aa17.69■□□□□ 0.42
CST3-203ENST00000398411 CCER2I3L3R5 266 aa17.69■□□□□ 0.42
CST3-203ENST00000398411 RRBP1Q9P2E9 1410 aaKnown RBP17.68■□□□□ 0.42
CST3-203ENST00000398411 FANCIQ9NVI1 1328 aa17.67■□□□□ 0.42
CST3-203ENST00000398411 HSPA5P11021 654 aaKnown RBP17.66■□□□□ 0.42
CST3-203ENST00000398411 MAPKBP1O60336 1514 aa17.65■□□□□ 0.42
CST3-203ENST00000398411 FGD5Q6ZNL6 1462 aa17.64■□□□□ 0.42
CST3-203ENST00000398411 RTL5Q5HYW3 569 aaPredicted RBP17.64■□□□□ 0.41
CST3-203ENST00000398411 IL27Q8NEV9 243 aa17.64■□□□□ 0.41
CST3-203ENST00000398411 NOP58Q9Y2X3 529 aaKnown RBP17.64■□□□□ 0.41
CST3-203ENST00000398411 ARHGAP35Q9NRY4 1499 aa17.63■□□□□ 0.41
CST3-203ENST00000398411 PPP4R2Q9NY27 417 aa17.62■□□□□ 0.41
CST3-203ENST00000398411 LAS1LQ9Y4W2 734 aaKnown RBP17.6■□□□□ 0.41
CST3-203ENST00000398411 TOPBP1Q92547 1522 aa17.58■□□□□ 0.4
CST3-203ENST00000398411 NESP48681 1621 aa17.57■□□□□ 0.4
CST3-203ENST00000398411 CUX2O14529 1486 aa17.57■□□□□ 0.4
CST3-203ENST00000398411 WASHC2AQ641Q2 1341 aa17.56■□□□□ 0.4
CST3-203ENST00000398411 FHOD3Q2V2M9 1422 aa17.55■□□□□ 0.4
CST3-203ENST00000398411 EIF4G2P78344 907 aaKnown RBP eCLIP17.55■□□□□ 0.45e-11■■■■■ 46.6
CST3-203ENST00000398411 ABCA10Q8WWZ4 1543 aa17.54■□□□□ 0.4
CST3-203ENST00000398411 ANP32AP39687 249 aaKnown RBP17.54■□□□□ 0.4
CST3-203ENST00000398411 MTUS2Q5JR59 1369 aa17.53■□□□□ 0.4
CST3-203ENST00000398411 C11orf95C9JLR9 678 aaPredicted RBP17.52■□□□□ 0.39
CST3-203ENST00000398411 POLA1P09884 1462 aaPredicted RBP17.51■□□□□ 0.39
CST3-203ENST00000398411 CARMIL1Q5VZK9 1371 aa17.51■□□□□ 0.39
CST3-203ENST00000398411 ZBTB47Q9UFB7 747 aaPredicted RBP17.51■□□□□ 0.39
CST3-203ENST00000398411 IGF1RP08069 1367 aa17.49■□□□□ 0.39
CST3-203ENST00000398411 PDS5BQ9NTI5 1447 aa17.49■□□□□ 0.39
CST3-203ENST00000398411 URB2Q14146 1524 aaKnown RBP17.48■□□□□ 0.39
CST3-203ENST00000398411 KIF21AQ7Z4S6 1674 aa17.48■□□□□ 0.39
CST3-203ENST00000398411 CUL7Q14999 1698 aa17.48■□□□□ 0.39
CST3-203ENST00000398411 L3MBTL2Q969R5 705 aa17.46■□□□□ 0.39
CST3-203ENST00000398411 EIF5BO60841 1220 aaKnown RBP17.46■□□□□ 0.39
CST3-203ENST00000398411 LRRC9Q6ZRR7 1453 aa17.45■□□□□ 0.38
CST3-203ENST00000398411 SKAP1Q86WV1 359 aa17.44■□□□□ 0.38
CST3-203ENST00000398411 PRKRIP1Q9H875 184 aaPredicted RBP17.44■□□□□ 0.38
CST3-203ENST00000398411 AKNAQ7Z591 1439 aa17.43■□□□□ 0.38
CST3-203ENST00000398411 ABCA5Q8WWZ7 1642 aa17.42■□□□□ 0.38
CST3-203ENST00000398411 RAD54L2Q9Y4B4 1467 aa17.4■□□□□ 0.38
CST3-203ENST00000398411 NEFMP07197 916 aa17.39■□□□□ 0.37
CST3-203ENST00000398411 TIMELESSQ9UNS1 1208 aa17.39■□□□□ 0.37
CST3-203ENST00000398411 CCDC18Q5T9S5 1454 aa17.38■□□□□ 0.37
CST3-203ENST00000398411 TMC1Q8TDI8 760 aa17.38■□□□□ 0.37
CST3-203ENST00000398411 KDM2AQ9Y2K7 1162 aa17.38■□□□□ 0.37
CST3-203ENST00000398411 ZNF777Q9ULD5 760 aaPredicted RBP17.37■□□□□ 0.37
CST3-203ENST00000398411 IPO9Q96P70 1041 aaKnown RBP17.36■□□□□ 0.37
CST3-203ENST00000398411 CTTNBP2Q8WZ74 1663 aa17.35■□□□□ 0.37
CST3-203ENST00000398411 SLC4A3P48751 1232 aa17.35■□□□□ 0.37
CST3-203ENST00000398411 TIAM1Q13009 1591 aa17.35■□□□□ 0.37
CST3-203ENST00000398411 TARBP1Q13395 1621 aaKnown RBP17.34■□□□□ 0.37
CST3-203ENST00000398411 SLC4A1APQ9BWU0 796 aaKnown RBP17.34■□□□□ 0.37
CST3-203ENST00000398411 AQRO60306 1485 aaKnown RBP eCLIP17.32■□□□□ 0.368e-11■■■■□ 26.1
CST3-203ENST00000398411 MPHOSPH9Q99550 1183 aa17.32■□□□□ 0.36
CST3-203ENST00000398411 NBPF8Q3BBV2 869 aa17.31■□□□□ 0.36
CST3-203ENST00000398411 MYT1LQ9UL68 1186 aa17.31■□□□□ 0.36
CST3-203ENST00000398411 ARXQ96QS3 562 aa17.31■□□□□ 0.36
CST3-203ENST00000398411 PTPRKQ15262 1439 aa17.31■□□□□ 0.36
CST3-203ENST00000398411 DNAJC5BQ9UF47 199 aa17.31■□□□□ 0.36
CST3-203ENST00000398411 FHAD1B1AJZ9 1412 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms