RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 MRS2Q9HD23 443 aa15.27■□□□□ 0.04
CSGALNACT1-202ENST00000397998 NBR1Q14596 966 aa15.26■□□□□ 0.03
CSGALNACT1-202ENST00000397998 SETD5Q9C0A6 1442 aa15.25■□□□□ 0.03
CSGALNACT1-202ENST00000397998 MTUS2Q5JR59 1369 aa15.23■□□□□ 0.03
CSGALNACT1-202ENST00000397998 RRP7BPQ9NSQ0 103 aa15.23■□□□□ 0.03
CSGALNACT1-202ENST00000397998 CCER2I3L3R5 266 aa15.22■□□□□ 0.03
CSGALNACT1-202ENST00000397998 DAXXQ9UER7 740 aaPredicted RBP15.22■□□□□ 0.03
CSGALNACT1-202ENST00000397998 SENP3-EIF4A1A0A087X0R7 540 aa15.22■□□□□ 0.03
CSGALNACT1-202ENST00000397998 ANP32AP39687 249 aaKnown RBP15.22■□□□□ 0.03
CSGALNACT1-202ENST00000397998 EIF4G2P78344 907 aaKnown RBP eCLIP15.2■□□□□ 0.02
CSGALNACT1-202ENST00000397998 NPM2Q86SE8 214 aaKnown RBP15.2■□□□□ 0.02
CSGALNACT1-202ENST00000397998 KIF21BO75037 1637 aa15.19■□□□□ 0.02
CSGALNACT1-202ENST00000397998 PPP1R15AO75807 674 aaPredicted RBP15.18■□□□□ 0.02
CSGALNACT1-202ENST00000397998 CCDC136Q96JN2 1154 aa15.17■□□□□ 0.02
CSGALNACT1-202ENST00000397998 TIMELESSQ9UNS1 1208 aa15.17■□□□□ 0.02
CSGALNACT1-202ENST00000397998 B4GALNT3Q6L9W6 998 aa15.16■□□□□ 0.02
CSGALNACT1-202ENST00000397998 SALL2Q9Y467 1007 aaPredicted RBP15.14■□□□□ 0.01
CSGALNACT1-202ENST00000397998 CARMIL1Q5VZK9 1371 aa15.13■□□□□ 0.01
CSGALNACT1-202ENST00000397998 PPP4R2Q9NY27 417 aa15.13■□□□□ 0.01
CSGALNACT1-202ENST00000397998 CUX2O14529 1486 aa15.12■□□□□ 0.01
CSGALNACT1-202ENST00000397998 SYNJ1O43426 1573 aa15.1■□□□□ 0.01
CSGALNACT1-202ENST00000397998 ATAD2BQ9ULI0 1458 aa15.09■□□□□ 0.01
CSGALNACT1-202ENST00000397998 MYT1LQ9UL68 1186 aa15.09■□□□□ 0.01
CSGALNACT1-202ENST00000397998 ZBTB47Q9UFB7 747 aaPredicted RBP15.09■□□□□ 0.01
CSGALNACT1-202ENST00000397998 ZNF777Q9ULD5 760 aaPredicted RBP15.08■□□□□ 0
CSGALNACT1-202ENST00000397998 FHAD1B1AJZ9 1412 aa15.07■□□□□ 0
CSGALNACT1-202ENST00000397998 TMC1Q8TDI8 760 aa15.07■□□□□ 0
CSGALNACT1-202ENST00000397998 HSPA5P11021 654 aaKnown RBP15.07■□□□□ 0
CSGALNACT1-202ENST00000397998 ARAP1Q96P48 1450 aa15.05■□□□□ -0
CSGALNACT1-202ENST00000397998 SLC4A1APQ9BWU0 796 aaKnown RBP15.02■□□□□ -0
CSGALNACT1-202ENST00000397998 ARHGAP35Q9NRY4 1499 aa15.01□□□□□ -0.01
CSGALNACT1-202ENST00000397998 RRBP1Q9P2E9 1410 aaKnown RBP15.01□□□□□ -0.01
CSGALNACT1-202ENST00000397998 FOXD1Q16676 465 aa15□□□□□ -0.01
CSGALNACT1-202ENST00000397998 NOP58Q9Y2X3 529 aaKnown RBP14.99□□□□□ -0.01
CSGALNACT1-202ENST00000397998 DEKP35659 375 aaKnown RBP14.99□□□□□ -0.01
CSGALNACT1-202ENST00000397998 PHLDB1Q86UU1 1377 aa14.98□□□□□ -0.01
CSGALNACT1-202ENST00000397998 KDM2AQ9Y2K7 1162 aa14.97□□□□□ -0.01
CSGALNACT1-202ENST00000397998 EIF4G1Q04637 1599 aaKnown RBP14.97□□□□□ -0.01
CSGALNACT1-202ENST00000397998 FHOD3Q2V2M9 1422 aa14.96□□□□□ -0.01
CSGALNACT1-202ENST00000397998 FBLN2P98095 1184 aa14.93□□□□□ -0.02
CSGALNACT1-202ENST00000397998 PRXQ9BXM0 1461 aa14.93□□□□□ -0.02
CSGALNACT1-202ENST00000397998 ERICH6BQ5W0A0 696 aa14.91□□□□□ -0.02
CSGALNACT1-202ENST00000397998 L3MBTL2Q969R5 705 aa14.9□□□□□ -0.02
CSGALNACT1-202ENST00000397998 IGF1RP08069 1367 aa14.9□□□□□ -0.02
CSGALNACT1-202ENST00000397998 WDR97A6NE52 1622 aa14.89□□□□□ -0.03
CSGALNACT1-202ENST00000397998 FANCIQ9NVI1 1328 aa14.88□□□□□ -0.03
CSGALNACT1-202ENST00000397998 LAS1LQ9Y4W2 734 aaKnown RBP14.88□□□□□ -0.03
CSGALNACT1-202ENST00000397998 MPHOSPH9Q99550 1183 aa14.87□□□□□ -0.03
CSGALNACT1-202ENST00000397998 ERICH3Q5RHP9 1530 aa14.87□□□□□ -0.03
CSGALNACT1-202ENST00000397998 LRRC9Q6ZRR7 1453 aa14.86□□□□□ -0.03
CSGALNACT1-202ENST00000397998 RTN4Q9NQC3 1192 aaKnown RBP14.86□□□□□ -0.03
CSGALNACT1-202ENST00000397998 PRKRIP1Q9H875 184 aaPredicted RBP14.85□□□□□ -0.03
CSGALNACT1-202ENST00000397998 FMN1Q68DA7 1419 aa14.84□□□□□ -0.03
CSGALNACT1-202ENST00000397998 CCDC18Q5T9S5 1454 aa14.83□□□□□ -0.03
CSGALNACT1-202ENST00000397998 MSH5O43196 834 aa14.83□□□□□ -0.04
CSGALNACT1-202ENST00000397998 EIF5BO60841 1220 aaKnown RBP14.83□□□□□ -0.04
CSGALNACT1-202ENST00000397998 CARD11Q9BXL7 1154 aa14.82□□□□□ -0.04
CSGALNACT1-202ENST00000397998 WASHC2AQ641Q2 1341 aa14.81□□□□□ -0.04
CSGALNACT1-202ENST00000397998 TOP2BQ02880 1626 aa14.81□□□□□ -0.04
CSGALNACT1-202ENST00000397998 NEFMP07197 916 aa14.8□□□□□ -0.04
CSGALNACT1-202ENST00000397998 CCDC184Q52MB2 194 aa14.79□□□□□ -0.04
CSGALNACT1-202ENST00000397998 CANXP27824 592 aaKnown RBP14.77□□□□□ -0.04
CSGALNACT1-202ENST00000397998 RGL3Q3MIN7 710 aa14.77□□□□□ -0.04
CSGALNACT1-202ENST00000397998 CFDP1Q9UEE9 299 aaPredicted RBP14.77□□□□□ -0.04
CSGALNACT1-202ENST00000397998 NUDCQ9Y266 331 aa14.77□□□□□ -0.04
CSGALNACT1-202ENST00000397998 TDRD9Q8NDG6 1382 aaKnown RBP14.77□□□□□ -0.04
CSGALNACT1-202ENST00000397998 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.77□□□□□ -0.05
CSGALNACT1-202ENST00000397998 ZBED9Q6R2W3 1325 aa14.77□□□□□ -0.05
CSGALNACT1-202ENST00000397998 CADPSQ9ULU8 1353 aa14.76□□□□□ -0.05
CSGALNACT1-202ENST00000397998 FGD6Q6ZV73 1430 aa14.76□□□□□ -0.05
CSGALNACT1-202ENST00000397998 TSPY4P0CV99 314 aa14.75□□□□□ -0.05
CSGALNACT1-202ENST00000397998 TSPY10P0CW01 314 aa14.75□□□□□ -0.05
CSGALNACT1-202ENST00000397998 IPO9Q96P70 1041 aaKnown RBP14.75□□□□□ -0.05
CSGALNACT1-202ENST00000397998 UACAQ9BZF9 1416 aa14.74□□□□□ -0.05
CSGALNACT1-202ENST00000397998 CUX1P39880 1505 aa14.74□□□□□ -0.05
CSGALNACT1-202ENST00000397998 TIAM1Q13009 1591 aa14.72□□□□□ -0.05
CSGALNACT1-202ENST00000397998 FGD5Q6ZNL6 1462 aa14.71□□□□□ -0.05
CSGALNACT1-202ENST00000397998 MAPKBP1O60336 1514 aa14.7□□□□□ -0.06
CSGALNACT1-202ENST00000397998 PKD2Q13563 968 aa14.7□□□□□ -0.06
CSGALNACT1-202ENST00000397998 PPM1GO15355 546 aaPredicted RBP14.7□□□□□ -0.06
CSGALNACT1-202ENST00000397998 WDR43Q15061 677 aaKnown RBP eCLIP14.7□□□□□ -0.06
CSGALNACT1-202ENST00000397998 CC2D1BQ5T0F9 858 aaKnown RBP14.69□□□□□ -0.06
CSGALNACT1-202ENST00000397998 DCAF11Q8TEB1 546 aa14.69□□□□□ -0.06
CSGALNACT1-202ENST00000397998 CCDC7Q96M83 1385 aa14.69□□□□□ -0.06
CSGALNACT1-202ENST00000397998 DDRGK1Q96HY6 314 aa14.68□□□□□ -0.06
CSGALNACT1-202ENST00000397998 RCAN3Q9UKA8 241 aa14.68□□□□□ -0.06
CSGALNACT1-202ENST00000397998 PAK3O75914 559 aaPredicted RBP14.67□□□□□ -0.06
CSGALNACT1-202ENST00000397998 ARXQ96QS3 562 aa14.67□□□□□ -0.06
CSGALNACT1-202ENST00000397998 KIF7Q2M1P5 1343 aa14.67□□□□□ -0.06
CSGALNACT1-202ENST00000397998 CNTLNQ9NXG0 1405 aa14.67□□□□□ -0.06
CSGALNACT1-202ENST00000397998 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.66□□□□□ -0.06
CSGALNACT1-202ENST00000397998 RGS3P49796 1198 aa14.65□□□□□ -0.06
CSGALNACT1-202ENST00000397998 RAD54L2Q9Y4B4 1467 aa14.65□□□□□ -0.06
CSGALNACT1-202ENST00000397998 NCAPD3P42695 1498 aa14.63□□□□□ -0.07
CSGALNACT1-202ENST00000397998 MYOM3Q5VTT5 1437 aa14.63□□□□□ -0.07
CSGALNACT1-202ENST00000397998 EXOC6Q8TAG9 804 aa14.63□□□□□ -0.07
CSGALNACT1-202ENST00000397998 CASKIN1Q8WXD9 1431 aa14.63□□□□□ -0.07
CSGALNACT1-202ENST00000397998 TCERG1O14776 1098 aaKnown RBP14.63□□□□□ -0.07
CSGALNACT1-202ENST00000397998 BICRAQ9NZM4 1560 aa14.63□□□□□ -0.07
CSGALNACT1-202ENST00000397998 CFTRP13569 1480 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms